RNA–Protein interactions for RNA: ENST00000472326.2

SGCE-210, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 453 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-210ENST00000472326 TRIM55Q9BYV6 548 aa10.69□□□□□ -0.7
SGCE-210ENST00000472326 FITM1A5D6W6 292 aa10.68□□□□□ -0.7
SGCE-210ENST00000472326 STXBP3O00186 592 aa10.68□□□□□ -0.7
SGCE-210ENST00000472326 NAT2P11245 290 aa10.68□□□□□ -0.7
SGCE-210ENST00000472326 GALK1P51570 392 aa10.68□□□□□ -0.7
SGCE-210ENST00000472326 CEP128Q6ZU80 1094 aa10.68□□□□□ -0.7
SGCE-210ENST00000472326 BVESQ8NE79 360 aa10.68□□□□□ -0.7
SGCE-210ENST00000472326 ASIC4Q96FT7 647 aa10.68□□□□□ -0.7
SGCE-210ENST00000472326 GPR55Q9Y2T6 319 aaPredicted RBP10.68□□□□□ -0.7
SGCE-210ENST00000472326 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.68□□□□□ -0.7
SGCE-210ENST00000472326 NOTOA8MTQ0 251 aa10.67□□□□□ -0.7
SGCE-210ENST00000472326 PSPNO60542 156 aa10.67□□□□□ -0.7
SGCE-210ENST00000472326 KCNH1O95259 989 aa10.67□□□□□ -0.7
SGCE-210ENST00000472326 EFEMP2O95967 443 aa10.67□□□□□ -0.7
SGCE-210ENST00000472326 NOP2P46087 812 aaKnown RBP10.67□□□□□ -0.7
SGCE-210ENST00000472326 CEBPAP49715 358 aaPredicted RBP10.67□□□□□ -0.7
SGCE-210ENST00000472326 ZNF143P52747 638 aaPredicted RBP10.67□□□□□ -0.7
SGCE-210ENST00000472326 SPPL2CQ8IUH8 684 aa10.67□□□□□ -0.7
SGCE-210ENST00000472326 NAT16Q8N8M0 369 aa10.67□□□□□ -0.7
SGCE-210ENST00000472326 TMEM52Q8NDY8 209 aa10.67□□□□□ -0.7
SGCE-210ENST00000472326 RNF32Q9H0A6 362 aa10.67□□□□□ -0.7
SGCE-210ENST00000472326 EMC9Q9Y3B6 208 aa10.67□□□□□ -0.7
SGCE-210ENST00000472326 AMPD2Q01433 879 aa10.66□□□□□ -0.7
SGCE-210ENST00000472326 CHRNEQ04844 493 aa10.66□□□□□ -0.7
SGCE-210ENST00000472326 TMEM67Q5HYA8 995 aa10.66□□□□□ -0.7
SGCE-210ENST00000472326 GPR160Q9UJ42 338 aa10.66□□□□□ -0.7
SGCE-210ENST00000472326 ZNF503-AS2A6NEH8 195 aa10.65□□□□□ -0.7
SGCE-210ENST00000472326 FADS2P1A8MWK0 482 aa10.65□□□□□ -0.7
SGCE-210ENST00000472326 NOP56O00567 594 aaKnown RBP10.65□□□□□ -0.7
SGCE-210ENST00000472326 TBX1O43435 398 aa10.65□□□□□ -0.7
SGCE-210ENST00000472326 GLI1P08151 1106 aa10.65□□□□□ -0.7
SGCE-210ENST00000472326 KIR2DL1P43626 348 aaPredicted RBP10.65□□□□□ -0.7
SGCE-210ENST00000472326 KIR2DL2P43627 348 aaPredicted RBP10.65□□□□□ -0.7
SGCE-210ENST00000472326 KIR3DS1Q14943 382 aa10.65□□□□□ -0.7
SGCE-210ENST00000472326 SLC14A2Q15849 920 aa10.65□□□□□ -0.7
SGCE-210ENST00000472326 EEPD1Q7L9B9 569 aa10.65□□□□□ -0.7
SGCE-210ENST00000472326 LIN37Q96GY3 246 aaPredicted RBP10.65□□□□□ -0.7
SGCE-210ENST00000472326 LRP2BPQ9P2M1 347 aa10.65□□□□□ -0.7
SGCE-210ENST00000472326 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.64□□□□□ -0.71
SGCE-210ENST00000472326 AURKAO14965 403 aa10.64□□□□□ -0.71
SGCE-210ENST00000472326 FGF10O15520 208 aaPredicted RBP10.64□□□□□ -0.71
SGCE-210ENST00000472326 ENDOUP21128 410 aaKnown RBP10.64□□□□□ -0.71
SGCE-210ENST00000472326 GRB10Q13322 594 aa10.64□□□□□ -0.71
SGCE-210ENST00000472326 SF3A1Q15459 793 aaKnown RBP10.64□□□□□ -0.71
SGCE-210ENST00000472326 NR0B2Q15466 257 aa10.64□□□□□ -0.71
SGCE-210ENST00000472326 SIRT2Q8IXJ6 389 aa10.64□□□□□ -0.71
SGCE-210ENST00000472326 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.64□□□□□ -0.71
SGCE-210ENST00000472326 TNFRSF10DQ9UBN6 386 aa10.64□□□□□ -0.71
SGCE-210ENST00000472326 ITGAVP06756 1048 aa10.63□□□□□ -0.71
SGCE-210ENST00000472326 RTP1P59025 263 aa10.63□□□□□ -0.71
SGCE-210ENST00000472326 SLC10A6Q3KNW5 377 aa10.63□□□□□ -0.71
SGCE-210ENST00000472326 ZNF227Q86WZ6 799 aa10.63□□□□□ -0.71
SGCE-210ENST00000472326 TRIM59Q8IWR1 403 aa10.63□□□□□ -0.71
SGCE-210ENST00000472326 LILRA2Q8N149 483 aa10.63□□□□□ -0.71
SGCE-210ENST00000472326 BTN2A2Q8WVV5 523 aa10.63□□□□□ -0.71
SGCE-210ENST00000472326 SREK1Q8WXA9 508 aaKnown RBP10.63□□□□□ -0.71
SGCE-210ENST00000472326 MRGPRX3Q96LB0 322 aa10.63□□□□□ -0.71
SGCE-210ENST00000472326 PLCD4Q9BRC7 762 aa10.63□□□□□ -0.71
SGCE-210ENST00000472326 RNF114Q9Y508 228 aa10.63□□□□□ -0.71
SGCE-210ENST00000472326 CCDC85CA6NKD9 419 aa10.62□□□□□ -0.71
SGCE-210ENST00000472326 HSF5Q4G112 596 aaPredicted RBP10.62□□□□□ -0.71
SGCE-210ENST00000472326 GTF2IRD2BQ6EKJ0 949 aa10.62□□□□□ -0.71
SGCE-210ENST00000472326 GTF2IRD2Q86UP8 949 aa10.62□□□□□ -0.71
SGCE-210ENST00000472326 SHISA4Q96DD7 197 aa10.62□□□□□ -0.71
SGCE-210ENST00000472326 BACE2Q9Y5Z0 518 aa10.62□□□□□ -0.71
SGCE-210ENST00000472326 U2SURPO15042 1029 aaKnown RBP10.61□□□□□ -0.71
SGCE-210ENST00000472326 PAX4O43316 350 aa10.61□□□□□ -0.71
SGCE-210ENST00000472326 NRDCO43847 1150 aa10.61□□□□□ -0.71
SGCE-210ENST00000472326 POMZP3Q6PJE2 187 aa10.61□□□□□ -0.71
SGCE-210ENST00000472326 MPZL3Q6UWV2 235 aa10.61□□□□□ -0.71
SGCE-210ENST00000472326 SLCO6A1Q86UG4 719 aa10.61□□□□□ -0.71
SGCE-210ENST00000472326 CRACR2BQ8N4Y2 399 aaPredicted RBP10.61□□□□□ -0.71
SGCE-210ENST00000472326 PTCHD1Q96NR3 888 aa10.61□□□□□ -0.71
SGCE-210ENST00000472326 JMJD8Q96S16 334 aa10.61□□□□□ -0.71
SGCE-210ENST00000472326 HIRIP3Q9BW71 556 aaPredicted RBP10.61□□□□□ -0.71
SGCE-210ENST00000472326 C2orf71A6NGG8 1288 aa10.6□□□□□ -0.71
SGCE-210ENST00000472326 SEPHS1P49903 392 aa10.6□□□□□ -0.71
SGCE-210ENST00000472326 SCRN1Q12765 414 aa10.6□□□□□ -0.71
SGCE-210ENST00000472326 ARMC5Q96C12 935 aa10.6□□□□□ -0.71
SGCE-210ENST00000472326 DNAJC2Q99543 621 aaKnown RBP10.6□□□□□ -0.71
SGCE-210ENST00000472326 TAF6LQ9Y6J9 622 aa10.6□□□□□ -0.71
SGCE-210ENST00000472326 RBL2Q08999 1139 aa10.59□□□□□ -0.71
SGCE-210ENST00000472326 EEF1DP3Q658K8 133 aa10.59□□□□□ -0.71
SGCE-210ENST00000472326 RCSD1Q6JBY9 416 aa10.59□□□□□ -0.71
SGCE-210ENST00000472326 NLRX1Q86UT6 975 aa10.59□□□□□ -0.71
SGCE-210ENST00000472326 PMFBP1Q8TBY8 1022 aa10.59□□□□□ -0.71
SGCE-210ENST00000472326 GPRC5CQ9NQ84 441 aa10.59□□□□□ -0.71
SGCE-210ENST00000472326 MLANAQ16655 118 aa10.58□□□□□ -0.72
SGCE-210ENST00000472326 HLA-DQA1Q5Y7H0 255 aa10.58□□□□□ -0.72
SGCE-210ENST00000472326 CYP2R1Q6VVX0 501 aa10.58□□□□□ -0.72
SGCE-210ENST00000472326 PRR23BQ6ZRT6 265 aa10.58□□□□□ -0.72
SGCE-210ENST00000472326 JAMLQ86YT9 394 aa10.58□□□□□ -0.72
SGCE-210ENST00000472326 DIRC2Q96SL1 478 aa10.58□□□□□ -0.72
SGCE-210ENST00000472326 IMPACTQ9P2X3 320 aa10.58□□□□□ -0.72
SGCE-210ENST00000472326 A0A1W2PQ45 241 aaPredicted RBP10.57□□□□□ -0.72
SGCE-210ENST00000472326 A0A1W2PQY0 241 aa10.57□□□□□ -0.72
SGCE-210ENST00000472326 LRRC10BA6NIK2 292 aa10.57□□□□□ -0.72
SGCE-210ENST00000472326 CYP4F3Q08477 520 aa10.57□□□□□ -0.72
SGCE-210ENST00000472326 LAPTM5Q13571 262 aa10.57□□□□□ -0.72
SGCE-210ENST00000472326 SNX17Q15036 470 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms