RNA–Protein interactions for RNA: ENST00000439122.6

HDAC8-214, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-214ENST00000439122 KCNJ12Q14500 433 aa13.67□□□□□ -0.22
HDAC8-214ENST00000439122 TCP11X2Q5H9J9 407 aa13.67□□□□□ -0.22
HDAC8-214ENST00000439122 SOGA3Q5TF21 947 aa13.67□□□□□ -0.22
HDAC8-214ENST00000439122 FAM163AQ96GL9 167 aaPredicted RBP13.67□□□□□ -0.22
HDAC8-214ENST00000439122 NAA15Q9BXJ9 866 aaKnown RBP13.67□□□□□ -0.22
HDAC8-214ENST00000439122 C6orf50Q9HD87 102 aa13.67□□□□□ -0.22
HDAC8-214ENST00000439122 TAB2Q9NYJ8 693 aa13.67□□□□□ -0.22
HDAC8-214ENST00000439122 PODXL2Q9NZ53 605 aa13.67□□□□□ -0.22
HDAC8-214ENST00000439122 OGFRQ9NZT2 677 aa13.67□□□□□ -0.22
HDAC8-214ENST00000439122 LIMA1Q9UHB6 759 aaKnown RBP13.67□□□□□ -0.22
HDAC8-214ENST00000439122 GTF2IP78347 998 aa13.67□□□□□ -0.22
HDAC8-214ENST00000439122 NONOQ15233 471 aaKnown RBP eCLIP13.67□□□□□ -0.22
HDAC8-214ENST00000439122 KRT25Q7Z3Z0 450 aa13.67□□□□□ -0.22
HDAC8-214ENST00000439122 CNGA4Q8IV77 575 aa13.67□□□□□ -0.22
HDAC8-214ENST00000439122 SMAP1Q8IYB5 467 aaPredicted RBP13.67□□□□□ -0.22
HDAC8-214ENST00000439122 PIGSQ96S52 555 aa13.67□□□□□ -0.22
HDAC8-214ENST00000439122 SRRTQ9BXP5 876 aaKnown RBP13.67□□□□□ -0.22
HDAC8-214ENST00000439122 CCSER1Q9C0I3 900 aa13.67□□□□□ -0.22
HDAC8-214ENST00000439122 MRPL44Q9H9J2 332 aaKnown RBP13.67□□□□□ -0.22
HDAC8-214ENST00000439122 DDX41Q9UJV9 622 aaKnown RBP13.67□□□□□ -0.22
HDAC8-214ENST00000439122 GAKO14976 1311 aa13.66□□□□□ -0.22
HDAC8-214ENST00000439122 TRIM49BA6NDI0 452 aa13.66□□□□□ -0.22
HDAC8-214ENST00000439122 LRRC10BA6NIK2 292 aa13.66□□□□□ -0.22
HDAC8-214ENST00000439122 USP17L5A8MUK1 530 aa13.66□□□□□ -0.22
HDAC8-214ENST00000439122 F8W031 263 aaPredicted RBP13.66□□□□□ -0.22
HDAC8-214ENST00000439122 RIMBP2O15034 1052 aa13.66□□□□□ -0.22
HDAC8-214ENST00000439122 PRPHP41219 470 aa13.66□□□□□ -0.22
HDAC8-214ENST00000439122 FXR1P51114 621 aaKnown RBP eCLIP13.66□□□□□ -0.22
HDAC8-214ENST00000439122 COPB1P53618 953 aaKnown RBP13.66□□□□□ -0.22
HDAC8-214ENST00000439122 DDR1Q08345 913 aa13.66□□□□□ -0.22
HDAC8-214ENST00000439122 ARHGAP29Q52LW3 1261 aa13.66□□□□□ -0.22
HDAC8-214ENST00000439122 RAD9BQ6WBX8 426 aa13.66□□□□□ -0.22
HDAC8-214ENST00000439122 UBXN4Q92575 508 aa13.66□□□□□ -0.22
HDAC8-214ENST00000439122 CARD6Q9BX69 1037 aa13.66□□□□□ -0.22
HDAC8-214ENST00000439122 UBA5Q9GZZ9 404 aa13.66□□□□□ -0.22
HDAC8-214ENST00000439122 LZTFL1Q9NQ48 299 aa13.66□□□□□ -0.22
HDAC8-214ENST00000439122 MYH1P12882 1939 aa13.66□□□□□ -0.22
HDAC8-214ENST00000439122 AFF2P51816 1311 aa13.66□□□□□ -0.22
HDAC8-214ENST00000439122 ITIH6Q6UXX5 1313 aa13.66□□□□□ -0.22
HDAC8-214ENST00000439122 OR52Z1P0C646 297 aa13.65□□□□□ -0.22
HDAC8-214ENST00000439122 HOXA10P31260 410 aaPredicted RBP13.65□□□□□ -0.22
HDAC8-214ENST00000439122 NUP88Q99567 741 aaPredicted RBP13.65□□□□□ -0.22
HDAC8-214ENST00000439122 KBTBD4Q9NVX7 518 aa13.65□□□□□ -0.22
HDAC8-214ENST00000439122 DAGLAQ9Y4D2 1042 aa13.65□□□□□ -0.22
HDAC8-214ENST00000439122 UBR3Q6ZT12 1888 aa13.65□□□□□ -0.22
HDAC8-214ENST00000439122 FRMPD2Q68DX3 1309 aaPredicted RBP13.65□□□□□ -0.22
HDAC8-214ENST00000439122 H7C1D1 291 aa13.65□□□□□ -0.22
HDAC8-214ENST00000439122 TXNRD1Q16881 649 aa13.65□□□□□ -0.22
HDAC8-214ENST00000439122 NEK8Q86SG6 692 aa13.65□□□□□ -0.22
HDAC8-214ENST00000439122 CABP7Q86V35 215 aa13.65□□□□□ -0.22
HDAC8-214ENST00000439122 ADSSL1Q8N142 457 aa13.65□□□□□ -0.22
HDAC8-214ENST00000439122 CRAMP1Q96RY5 1269 aa13.65□□□□□ -0.22
HDAC8-214ENST00000439122 IRX2Q9BZI1 471 aaPredicted RBP13.65□□□□□ -0.22
HDAC8-214ENST00000439122 ZMYND15Q9H091 742 aa13.65□□□□□ -0.22
HDAC8-214ENST00000439122 BIN2Q9UBW5 565 aaPredicted RBP13.65□□□□□ -0.22
HDAC8-214ENST00000439122 ADGRG1Q9Y653 693 aa13.65□□□□□ -0.22
HDAC8-214ENST00000439122 GOLGB1Q14789 3259 aaKnown RBP13.65□□□□□ -0.22
HDAC8-214ENST00000439122 MYL1P05976 194 aa13.64□□□□□ -0.23
HDAC8-214ENST00000439122 PLCG1P19174 1290 aa13.64□□□□□ -0.23
HDAC8-214ENST00000439122 EIF6P56537 245 aaKnown RBP13.64□□□□□ -0.23
HDAC8-214ENST00000439122 UBXN1Q04323 297 aa13.64□□□□□ -0.23
HDAC8-214ENST00000439122 STIM1Q13586 685 aa13.64□□□□□ -0.23
HDAC8-214ENST00000439122 KCNB1Q14721 858 aa13.64□□□□□ -0.23
HDAC8-214ENST00000439122 JAKMIP3Q5VZ66 844 aa13.64□□□□□ -0.23
HDAC8-214ENST00000439122 REXO1Q8N1G1 1221 aaKnown RBP13.64□□□□□ -0.23
HDAC8-214ENST00000439122 LRRC47Q8N1G4 583 aaKnown RBP13.64□□□□□ -0.23
HDAC8-214ENST00000439122 TBCKQ8TEA7 893 aa13.64□□□□□ -0.23
HDAC8-214ENST00000439122 AK8Q96MA6 479 aa13.64□□□□□ -0.23
HDAC8-214ENST00000439122 POLRMTO00411 1230 aaKnown RBP13.64□□□□□ -0.23
HDAC8-214ENST00000439122 PES1O00541 588 aaKnown RBP13.64□□□□□ -0.23
HDAC8-214ENST00000439122 PPEF1O14829 653 aaPredicted RBP13.64□□□□□ -0.23
HDAC8-214ENST00000439122 KLRC4O43908 158 aa13.64□□□□□ -0.23
HDAC8-214ENST00000439122 ONECUT3O60422 494 aaPredicted RBP13.64□□□□□ -0.23
HDAC8-214ENST00000439122 PDHBP11177 359 aa13.64□□□□□ -0.23
HDAC8-214ENST00000439122 TECP42680 631 aa13.64□□□□□ -0.23
HDAC8-214ENST00000439122 PMS1P54277 932 aaKnown RBP13.64□□□□□ -0.23
HDAC8-214ENST00000439122 LRRC15Q8TF66 581 aa13.64□□□□□ -0.23
HDAC8-214ENST00000439122 KIFC2Q96AC6 838 aa13.64□□□□□ -0.23
HDAC8-214ENST00000439122 CCDC51Q96ER9 411 aa13.64□□□□□ -0.23
HDAC8-214ENST00000439122 PSMA7O14818 248 aa13.63□□□□□ -0.23
HDAC8-214ENST00000439122 RHOBTB3O94955 611 aa13.63□□□□□ -0.23
HDAC8-214ENST00000439122 SMARCA1P28370 1054 aa13.63□□□□□ -0.23
HDAC8-214ENST00000439122 MAP3K9P80192 1104 aa13.63□□□□□ -0.23
HDAC8-214ENST00000439122 SLC27A3Q5K4L6 730 aa13.63□□□□□ -0.23
HDAC8-214ENST00000439122 TRIM47Q96LD4 638 aa13.63□□□□□ -0.23
HDAC8-214ENST00000439122 ABHD10Q9NUJ1 306 aa13.63□□□□□ -0.23
HDAC8-214ENST00000439122 MTMR4Q9NYA4 1195 aa13.63□□□□□ -0.23
HDAC8-214ENST00000439122 MYH8P13535 1937 aa13.63□□□□□ -0.23
HDAC8-214ENST00000439122 A0A0U1RQJ8 604 aa13.63□□□□□ -0.23
HDAC8-214ENST00000439122 EFCAB8A8MWE9 144 aa13.63□□□□□ -0.23
HDAC8-214ENST00000439122 TADA3O75528 432 aa13.63□□□□□ -0.23
HDAC8-214ENST00000439122 H2AFXP16104 143 aaPredicted RBP13.63□□□□□ -0.23
HDAC8-214ENST00000439122 IRF2BP1Q8IU81 584 aa13.63□□□□□ -0.23
HDAC8-214ENST00000439122 GIMAP8Q8ND71 665 aaPredicted RBP13.63□□□□□ -0.23
HDAC8-214ENST00000439122 ATRIPQ8WXE1 791 aa13.63□□□□□ -0.23
HDAC8-214ENST00000439122 CUEDC2Q9H467 287 aa13.63□□□□□ -0.23
HDAC8-214ENST00000439122 TMEM260Q9NX78 707 aa13.63□□□□□ -0.23
HDAC8-214ENST00000439122 TRPC5Q9UL62 973 aaPredicted RBP13.63□□□□□ -0.23
HDAC8-214ENST00000439122 MRFAP1Q9Y605 127 aa13.63□□□□□ -0.23
HDAC8-214ENST00000439122 RNF225M0QZC1 329 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms