RNA–Protein interactions for RNA: ENST00000402326.1

CBX3P9-201, Transcript of chromobox 3 pseudogene 9, humanhuman

BASIC

Gene CBX3P9, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P9-201ENST00000402326 WNT11O96014 354 aa3.55□□□□□ -1.84
CBX3P9-201ENST00000402326 CD8BP10966 210 aa3.55□□□□□ -1.84
CBX3P9-201ENST00000402326 LTKP29376 864 aa3.55□□□□□ -1.84
CBX3P9-201ENST00000402326 NOP2P46087 812 aaKnown RBP3.55□□□□□ -1.84
CBX3P9-201ENST00000402326 PCBP3P57721 371 aaKnown RBP3.55□□□□□ -1.84
CBX3P9-201ENST00000402326 POU4F1Q01851 419 aa3.55□□□□□ -1.84
CBX3P9-201ENST00000402326 IKZF1Q13422 519 aa3.55□□□□□ -1.84
CBX3P9-201ENST00000402326 SQSTM1Q13501 440 aa3.55□□□□□ -1.84
CBX3P9-201ENST00000402326 PPP2R5DQ14738 602 aa3.55□□□□□ -1.84
CBX3P9-201ENST00000402326 SLC10A6Q3KNW5 377 aa3.55□□□□□ -1.84
CBX3P9-201ENST00000402326 FBLN7Q53RD9 439 aa3.55□□□□□ -1.84
CBX3P9-201ENST00000402326 ANGEL2Q5VTE6 544 aaKnown RBP3.55□□□□□ -1.84
CBX3P9-201ENST00000402326 VSIG10LQ86VR7 867 aa3.55□□□□□ -1.84
CBX3P9-201ENST00000402326 ARHGEF39Q8N4T4 335 aa3.55□□□□□ -1.84
CBX3P9-201ENST00000402326 USHBP1Q8N6Y0 703 aa3.55□□□□□ -1.84
CBX3P9-201ENST00000402326 ZNF513Q8N8E2 541 aaPredicted RBP3.55□□□□□ -1.84
CBX3P9-201ENST00000402326 LINC00116Q8NCU8 138 aa3.55□□□□□ -1.84
CBX3P9-201ENST00000402326 SGSM3Q96HU1 749 aa3.55□□□□□ -1.84
CBX3P9-201ENST00000402326 CWC22Q9HCG8 908 aaKnown RBP3.55□□□□□ -1.84
CBX3P9-201ENST00000402326 LMCD1Q9NZU5 365 aa3.55□□□□□ -1.84
CBX3P9-201ENST00000402326 APEX2Q9UBZ4 518 aa3.55□□□□□ -1.84
CBX3P9-201ENST00000402326 CGGBP1Q9UFW8 167 aaPredicted RBP3.55□□□□□ -1.84
CBX3P9-201ENST00000402326 ZMYM5Q9UJ78 669 aa3.55□□□□□ -1.84
CBX3P9-201ENST00000402326 MINPP1Q9UNW1 487 aa3.55□□□□□ -1.84
CBX3P9-201ENST00000402326 EMC9Q9Y3B6 208 aa3.55□□□□□ -1.84
CBX3P9-201ENST00000402326 H0Y8X5 98 aa3.54□□□□□ -1.84
CBX3P9-201ENST00000402326 ENPP3O14638 875 aa3.54□□□□□ -1.84
CBX3P9-201ENST00000402326 ESR1P03372 595 aa3.54□□□□□ -1.84
CBX3P9-201ENST00000402326 ITGAVP06756 1048 aa3.54□□□□□ -1.84
CBX3P9-201ENST00000402326 SYPP08247 313 aa3.54□□□□□ -1.84
CBX3P9-201ENST00000402326 VAV1P15498 845 aa3.54□□□□□ -1.84
CBX3P9-201ENST00000402326 BMP8BP34820 402 aa3.54□□□□□ -1.84
CBX3P9-201ENST00000402326 CD96P40200 585 aa3.54□□□□□ -1.84
CBX3P9-201ENST00000402326 CTSKP43235 329 aa3.54□□□□□ -1.84
CBX3P9-201ENST00000402326 AMPD2Q01433 879 aa3.54□□□□□ -1.84
CBX3P9-201ENST00000402326 ZP2Q05996 745 aa3.54□□□□□ -1.84
CBX3P9-201ENST00000402326 EGR3Q06889 387 aa3.54□□□□□ -1.84
CBX3P9-201ENST00000402326 SSRP1Q08945 709 aaKnown RBP3.54□□□□□ -1.84
CBX3P9-201ENST00000402326 GRB10Q13322 594 aa3.54□□□□□ -1.84
CBX3P9-201ENST00000402326 CRTC3Q6UUV7 619 aa3.54□□□□□ -1.84
CBX3P9-201ENST00000402326 RNF111Q6ZNA4 994 aa3.54□□□□□ -1.84
CBX3P9-201ENST00000402326 SPRED2Q7Z698 418 aa3.54□□□□□ -1.84
CBX3P9-201ENST00000402326 LRRC47Q8N1G4 583 aaKnown RBP3.54□□□□□ -1.84
CBX3P9-201ENST00000402326 FLCNQ8NFG4 579 aa3.54□□□□□ -1.84
CBX3P9-201ENST00000402326 APPBP2Q92624 585 aa3.54□□□□□ -1.84
CBX3P9-201ENST00000402326 SYTL4Q96C24 671 aaPredicted RBP3.54□□□□□ -1.84
CBX3P9-201ENST00000402326 ZDHHC15Q96MV8 337 aa3.54□□□□□ -1.84
CBX3P9-201ENST00000402326 CARS2Q9HA77 564 aaKnown RBP3.54□□□□□ -1.84
CBX3P9-201ENST00000402326 TCFL5Q9UL49 500 aa3.54□□□□□ -1.84
CBX3P9-201ENST00000402326 PCDHA11Q9Y5I1 949 aa3.54□□□□□ -1.84
CBX3P9-201ENST00000402326 A0A1W2PQU0 124 aa3.53□□□□□ -1.84
CBX3P9-201ENST00000402326 VAMP4O75379 141 aa3.53□□□□□ -1.84
CBX3P9-201ENST00000402326 CDC45O75419 566 aa3.53□□□□□ -1.84
CBX3P9-201ENST00000402326 CLSTN1O94985 981 aa3.53□□□□□ -1.84
CBX3P9-201ENST00000402326 ZNF205O95201 554 aa3.53□□□□□ -1.84
CBX3P9-201ENST00000402326 KCNH1O95259 989 aa3.53□□□□□ -1.84
CBX3P9-201ENST00000402326 FAM153BP0C7A2 387 aa3.53□□□□□ -1.84
CBX3P9-201ENST00000402326 TAL1P17542 331 aaPredicted RBP3.53□□□□□ -1.84
CBX3P9-201ENST00000402326 NCLP19338 710 aaKnown RBP3.53□□□□□ -1.84
CBX3P9-201ENST00000402326 ENDOUP21128 410 aaKnown RBP3.53□□□□□ -1.84
CBX3P9-201ENST00000402326 HSP90AA2PQ14568 343 aaPredicted RBP3.53□□□□□ -1.84
CBX3P9-201ENST00000402326 C21orf62-AS1Q17RA5 79 aa3.53□□□□□ -1.84
CBX3P9-201ENST00000402326 TKFCQ3LXA3 575 aa3.53□□□□□ -1.84
CBX3P9-201ENST00000402326 C2orf27AQ580R0 203 aa3.53□□□□□ -1.84
CBX3P9-201ENST00000402326 ZNF574Q6ZN55 896 aaPredicted RBP3.53□□□□□ -1.84
CBX3P9-201ENST00000402326 ZNF227Q86WZ6 799 aa3.53□□□□□ -1.84
CBX3P9-201ENST00000402326 TRIM59Q8IWR1 403 aa3.53□□□□□ -1.84
CBX3P9-201ENST00000402326 TP53INP2Q8IXH6 220 aa3.53□□□□□ -1.84
CBX3P9-201ENST00000402326 AGBL5Q8NDL9 886 aa3.53□□□□□ -1.84
CBX3P9-201ENST00000402326 GPATCH3Q96I76 525 aa3.53□□□□□ -1.84
CBX3P9-201ENST00000402326 MRGPRX3Q96LB0 322 aa3.53□□□□□ -1.84
CBX3P9-201ENST00000402326 FCRL3Q96P31 734 aaPredicted RBP3.53□□□□□ -1.84
CBX3P9-201ENST00000402326 SPATA9Q9BWV2 254 aa3.53□□□□□ -1.84
CBX3P9-201ENST00000402326 LGR4Q9BXB1 951 aa3.53□□□□□ -1.84
CBX3P9-201ENST00000402326 SLC12A9Q9BXP2 914 aa3.53□□□□□ -1.84
CBX3P9-201ENST00000402326 FOXP3Q9BZS1 431 aa3.53□□□□□ -1.84
CBX3P9-201ENST00000402326 TMEM260Q9NX78 707 aa3.53□□□□□ -1.84
CBX3P9-201ENST00000402326 PTCH2Q9Y6C5 1203 aa3.53□□□□□ -1.84
CBX3P9-201ENST00000402326 FKTNO75072 461 aa3.52□□□□□ -1.85
CBX3P9-201ENST00000402326 CD3EP07766 207 aa3.52□□□□□ -1.85
CBX3P9-201ENST00000402326 HMGB1P09429 215 aaKnown RBP3.52□□□□□ -1.85
CBX3P9-201ENST00000402326 GSTM1P09488 218 aa3.52□□□□□ -1.85
CBX3P9-201ENST00000402326 FUT4P22083 530 aa3.52□□□□□ -1.85
CBX3P9-201ENST00000402326 RPL10P27635 214 aaKnown RBP3.52□□□□□ -1.85
CBX3P9-201ENST00000402326 HOXC12P31275 282 aa3.52□□□□□ -1.85
CBX3P9-201ENST00000402326 PPP2R2AP63151 447 aa3.52□□□□□ -1.85
CBX3P9-201ENST00000402326 TEKQ02763 1124 aa3.52□□□□□ -1.85
CBX3P9-201ENST00000402326 LONRF2Q1L5Z9 754 aa3.52□□□□□ -1.85
CBX3P9-201ENST00000402326 DPY19L1Q2PZI1 675 aa3.52□□□□□ -1.85
CBX3P9-201ENST00000402326 PLEKHG4Q58EX7 1191 aa3.52□□□□□ -1.85
CBX3P9-201ENST00000402326 FOXB2Q5VYV0 432 aa3.52□□□□□ -1.85
CBX3P9-201ENST00000402326 GTF2IRD2BQ6EKJ0 949 aa3.52□□□□□ -1.85
CBX3P9-201ENST00000402326 SLC23A3Q6PIS1 610 aa3.52□□□□□ -1.85
CBX3P9-201ENST00000402326 GTF2IRD2Q86UP8 949 aa3.52□□□□□ -1.85
CBX3P9-201ENST00000402326 HOMER1Q86YM7 354 aa3.52□□□□□ -1.85
CBX3P9-201ENST00000402326 WFDC3Q8IUB2 231 aa3.52□□□□□ -1.85
CBX3P9-201ENST00000402326 JMYQ8N9B5 988 aa3.52□□□□□ -1.85
CBX3P9-201ENST00000402326 PI4K2BQ8TCG2 481 aa3.52□□□□□ -1.85
CBX3P9-201ENST00000402326 THAP3Q8WTV1 239 aaPredicted RBP3.52□□□□□ -1.85
CBX3P9-201ENST00000402326 CCDC140Q96MF4 163 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms