RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 KCNH3Q9ULD8 1083 aa17.27■□□□□ 0.36
COL25A1-201ENST00000399126 SMARCA1P28370 1054 aa17.27■□□□□ 0.35
COL25A1-201ENST00000399126 LONRF3Q496Y0 759 aa17.27■□□□□ 0.35
COL25A1-201ENST00000399126 SLFN13Q68D06 897 aa17.27■□□□□ 0.35
COL25A1-201ENST00000399126 CEP131Q9UPN4 1083 aa17.27■□□□□ 0.35
COL25A1-201ENST00000399126 ZNF541Q9H0D2 1346 aa17.27■□□□□ 0.35
COL25A1-201ENST00000399126 CTAGE5O15320 804 aa17.26■□□□□ 0.35
COL25A1-201ENST00000399126 AP5Z1O43299 807 aa17.26■□□□□ 0.35
COL25A1-201ENST00000399126 ECE1P42892 770 aa17.26■□□□□ 0.35
COL25A1-201ENST00000399126 PDILTQ8N807 584 aa17.26■□□□□ 0.35
COL25A1-201ENST00000399126 FAM237AA0A1B0GTK4 181 aa17.26■□□□□ 0.35
COL25A1-201ENST00000399126 FOXN1O15353 648 aa17.26■□□□□ 0.35
COL25A1-201ENST00000399126 SLC1A4P43007 532 aa17.26■□□□□ 0.35
COL25A1-201ENST00000399126 CCDC173Q0VFZ6 552 aa17.26■□□□□ 0.35
COL25A1-201ENST00000399126 TNIP1Q15025 636 aa17.26■□□□□ 0.35
COL25A1-201ENST00000399126 TBC1D10BQ4KMP7 808 aaPredicted RBP17.26■□□□□ 0.35
COL25A1-201ENST00000399126 MICALL2Q8IY33 904 aa17.26■□□□□ 0.35
COL25A1-201ENST00000399126 SPICE1Q8N0Z3 855 aa17.26■□□□□ 0.35
COL25A1-201ENST00000399126 DAGLBQ8NCG7 672 aa17.26■□□□□ 0.35
COL25A1-201ENST00000399126 ANP32BQ92688 251 aaKnown RBP17.26■□□□□ 0.35
COL25A1-201ENST00000399126 EPSTI1Q96J88 318 aa17.26■□□□□ 0.35
COL25A1-201ENST00000399126 PPP1R9BQ96SB3 815 aa17.26■□□□□ 0.35
COL25A1-201ENST00000399126 CBX8Q9HC52 389 aa17.26■□□□□ 0.35
COL25A1-201ENST00000399126 TMEM260Q9NX78 707 aa17.26■□□□□ 0.35
COL25A1-201ENST00000399126 PGAP2Q9UHJ9 254 aa17.26■□□□□ 0.35
COL25A1-201ENST00000399126 HERC5Q9UII4 1024 aaKnown RBP17.26■□□□□ 0.35
COL25A1-201ENST00000399126 CCDC194A0A1B0GVG4 234 aa17.25■□□□□ 0.35
COL25A1-201ENST00000399126 F5H6K3 240 aa17.25■□□□□ 0.35
COL25A1-201ENST00000399126 SNAP25P60880 206 aa17.25■□□□□ 0.35
COL25A1-201ENST00000399126 KLRC3Q07444 240 aa17.25■□□□□ 0.35
COL25A1-201ENST00000399126 CCDC84Q86UT8 332 aaPredicted RBP17.25■□□□□ 0.35
COL25A1-201ENST00000399126 FAM200AQ8TCP9 573 aa17.25■□□□□ 0.35
COL25A1-201ENST00000399126 ACER1Q8TDN7 264 aa17.25■□□□□ 0.35
COL25A1-201ENST00000399126 BIN1O00499 593 aa17.25■□□□□ 0.35
COL25A1-201ENST00000399126 MAFGO15525 162 aa17.25■□□□□ 0.35
COL25A1-201ENST00000399126 MYO1BO43795 1136 aa17.25■□□□□ 0.35
COL25A1-201ENST00000399126 NDUFB10O96000 172 aa17.25■□□□□ 0.35
COL25A1-201ENST00000399126 IL17AQ16552 155 aa17.25■□□□□ 0.35
COL25A1-201ENST00000399126 BIN2Q9UBW5 565 aaPredicted RBP17.25■□□□□ 0.35
COL25A1-201ENST00000399126 SMCHD1A6NHR9 2005 aa17.25■□□□□ 0.35
COL25A1-201ENST00000399126 LTBP3Q9NS15 1303 aa17.25■□□□□ 0.35
COL25A1-201ENST00000399126 A0A087X0B3 334 aa17.24■□□□□ 0.35
COL25A1-201ENST00000399126 VWA3AA6NCI4 1184 aa17.24■□□□□ 0.35
COL25A1-201ENST00000399126 FZD9O00144 591 aa17.24■□□□□ 0.35
COL25A1-201ENST00000399126 KIF20AO95235 890 aa17.24■□□□□ 0.35
COL25A1-201ENST00000399126 ATP2C1P98194 919 aaPredicted RBP17.24■□□□□ 0.35
COL25A1-201ENST00000399126 PNOCQ13519 176 aa17.24■□□□□ 0.35
COL25A1-201ENST00000399126 KIAA1755Q5JYT7 1200 aa17.24■□□□□ 0.35
COL25A1-201ENST00000399126 GPATCH4Q5T3I0 446 aaKnown RBP17.24■□□□□ 0.35
COL25A1-201ENST00000399126 JAKMIP3Q5VZ66 844 aa17.24■□□□□ 0.35
COL25A1-201ENST00000399126 PDLIM2Q96JY6 352 aa17.24■□□□□ 0.35
COL25A1-201ENST00000399126 POLR2DO15514 142 aaKnown RBP17.24■□□□□ 0.35
COL25A1-201ENST00000399126 TAL1P17542 331 aaPredicted RBP17.24■□□□□ 0.35
COL25A1-201ENST00000399126 ZNF280AP59817 542 aaPredicted RBP17.24■□□□□ 0.35
COL25A1-201ENST00000399126 RASA3Q14644 834 aa17.24■□□□□ 0.35
COL25A1-201ENST00000399126 ISM2Q6H9L7 571 aa17.24■□□□□ 0.35
COL25A1-201ENST00000399126 KIAA1468Q9P260 1216 aa17.24■□□□□ 0.35
COL25A1-201ENST00000399126 FKBP1CQ5VVH2 108 aa17.24■□□□□ 0.35
COL25A1-201ENST00000399126 C6orf50Q9HD87 102 aa17.24■□□□□ 0.35
COL25A1-201ENST00000399126 TRAPPC10P48553 1259 aa17.23■□□□□ 0.35
COL25A1-201ENST00000399126 ZNF165P49910 485 aa17.23■□□□□ 0.35
COL25A1-201ENST00000399126 FAM83AQ86UY5 434 aa17.23■□□□□ 0.35
COL25A1-201ENST00000399126 GRAMD1CQ8IYS0 662 aa17.23■□□□□ 0.35
COL25A1-201ENST00000399126 C4orf32Q8N8J7 132 aa17.23■□□□□ 0.35
COL25A1-201ENST00000399126 TMEM60Q9H2L4 133 aa17.23■□□□□ 0.35
COL25A1-201ENST00000399126 CNOT7Q9UIV1 285 aaKnown RBP17.23■□□□□ 0.35
COL25A1-201ENST00000399126 ZBTB21Q9ULJ3 1066 aa17.23■□□□□ 0.35
COL25A1-201ENST00000399126 PNMA6FA0A0J9YX94 578 aa17.23■□□□□ 0.35
COL25A1-201ENST00000399126 GALNT17Q6IS24 598 aa17.23■□□□□ 0.35
COL25A1-201ENST00000399126 KRBA2Q6ZNG9 492 aa17.23■□□□□ 0.35
COL25A1-201ENST00000399126 ZNF579Q8NAF0 562 aaKnown RBP17.23■□□□□ 0.35
COL25A1-201ENST00000399126 CCDC12Q8WUD4 166 aaPredicted RBP17.23■□□□□ 0.35
COL25A1-201ENST00000399126 SYMPKQ92797 1274 aaKnown RBP17.23■□□□□ 0.35
COL25A1-201ENST00000399126 GLIS2Q9BZE0 524 aaPredicted RBP17.23■□□□□ 0.35
COL25A1-201ENST00000399126 STX1AQ16623 288 aa17.22■□□□□ 0.35
COL25A1-201ENST00000399126 UBE2SQ16763 222 aa17.22■□□□□ 0.35
COL25A1-201ENST00000399126 DPCR1Q3MIW9 517 aa17.22■□□□□ 0.35
COL25A1-201ENST00000399126 DCAF4Q8WV16 495 aa17.22■□□□□ 0.35
COL25A1-201ENST00000399126 FHDC1Q9C0D6 1143 aaPredicted RBP17.22■□□□□ 0.35
COL25A1-201ENST00000399126 SERTAD1Q9UHV2 236 aa17.22■□□□□ 0.35
COL25A1-201ENST00000399126 VGLL3A8MV65 326 aa17.22■□□□□ 0.35
COL25A1-201ENST00000399126 ZBTB5O15062 677 aa17.22■□□□□ 0.35
COL25A1-201ENST00000399126 CDC25AP30304 524 aa17.22■□□□□ 0.35
COL25A1-201ENST00000399126 ZYXQ15942 572 aaKnown RBP17.22■□□□□ 0.35
COL25A1-201ENST00000399126 QRICH1Q2TAL8 776 aa17.22■□□□□ 0.35
COL25A1-201ENST00000399126 UVSSAQ2YD98 709 aa17.22■□□□□ 0.35
COL25A1-201ENST00000399126 REXO1Q8N1G1 1221 aaKnown RBP17.22■□□□□ 0.35
COL25A1-201ENST00000399126 CNNM3Q8NE01 707 aa17.22■□□□□ 0.35
COL25A1-201ENST00000399126 MTMR8Q96EF0 704 aa17.22■□□□□ 0.35
COL25A1-201ENST00000399126 TIGD1Q96MW7 591 aa17.22■□□□□ 0.35
COL25A1-201ENST00000399126 FAM13BQ9NYF5 915 aa17.22■□□□□ 0.35
COL25A1-201ENST00000399126 GNA11P29992 359 aa17.21■□□□□ 0.35
COL25A1-201ENST00000399126 ARHGAP27Q6ZUM4 889 aa17.21■□□□□ 0.35
COL25A1-201ENST00000399126 GMCL1P1Q8NEA9 526 aa17.21■□□□□ 0.35
COL25A1-201ENST00000399126 TEPSINQ96N21 525 aa17.21■□□□□ 0.35
COL25A1-201ENST00000399126 PRR29P0C7W0 189 aa17.21■□□□□ 0.35
COL25A1-201ENST00000399126 RPS12P25398 132 aaKnown RBP17.21■□□□□ 0.35
COL25A1-201ENST00000399126 LETM2Q2VYF4 491 aa17.21■□□□□ 0.35
COL25A1-201ENST00000399126 TMEM232C9JQI7 657 aa17.2■□□□□ 0.34
COL25A1-201ENST00000399126 ADCY7P51828 1080 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms