RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 ERCC5P28715 1186 aaPredicted RBP13.19□□□□□ -0.3
MCF2L-202ENST00000375597 TRIM31Q9BZY9 425 aa13.19□□□□□ -0.3
MCF2L-202ENST00000375597 PDE2AO00408 941 aaPredicted RBP13.19□□□□□ -0.3
MCF2L-202ENST00000375597 CYP19A1P11511 503 aaPredicted RBP13.19□□□□□ -0.3
MCF2L-202ENST00000375597 RASSF7Q02833 373 aa13.19□□□□□ -0.3
MCF2L-202ENST00000375597 STAG1Q8WVM7 1258 aa13.19□□□□□ -0.3
MCF2L-202ENST00000375597 CNOT6LQ96LI5 555 aaKnown RBP13.19□□□□□ -0.3
MCF2L-202ENST00000375597 PLCG1P19174 1290 aa13.18□□□□□ -0.3
MCF2L-202ENST00000375597 ARID4AP29374 1257 aaPredicted RBP13.18□□□□□ -0.3
MCF2L-202ENST00000375597 CRKLP46109 303 aaKnown RBP13.18□□□□□ -0.3
MCF2L-202ENST00000375597 TNNI2P48788 182 aa13.18□□□□□ -0.3
MCF2L-202ENST00000375597 SARSP49591 514 aaKnown RBP13.18□□□□□ -0.3
MCF2L-202ENST00000375597 VGLL2Q8N8G2 317 aa13.18□□□□□ -0.3
MCF2L-202ENST00000375597 PNMA1Q8ND90 353 aa13.18□□□□□ -0.3
MCF2L-202ENST00000375597 ACBD3Q9H3P7 528 aa13.18□□□□□ -0.3
MCF2L-202ENST00000375597 TMEM260Q9NX78 707 aa13.18□□□□□ -0.3
MCF2L-202ENST00000375597 GOLGA6CA6NDK9 693 aa13.18□□□□□ -0.3
MCF2L-202ENST00000375597 GOLGA6DP0CG33 693 aa13.18□□□□□ -0.3
MCF2L-202ENST00000375597 STK4Q13043 487 aa13.18□□□□□ -0.3
MCF2L-202ENST00000375597 MAATS1Q7Z4T9 603 aa13.18□□□□□ -0.3
MCF2L-202ENST00000375597 TXNRD3Q86VQ6 643 aa13.18□□□□□ -0.3
MCF2L-202ENST00000375597 FCHSD1Q86WN1 690 aa13.18□□□□□ -0.3
MCF2L-202ENST00000375597 TMTC2Q8N394 836 aa13.18□□□□□ -0.3
MCF2L-202ENST00000375597 GLIS3Q8NEA6 775 aa13.18□□□□□ -0.3
MCF2L-202ENST00000375597 NHEJ1Q9H9Q4 299 aaPredicted RBP13.18□□□□□ -0.3
MCF2L-202ENST00000375597 GPCPD1Q9NPB8 672 aa13.18□□□□□ -0.3
MCF2L-202ENST00000375597 GOLGA6AQ9NYA3 693 aa13.18□□□□□ -0.3
MCF2L-202ENST00000375597 SRP68Q9UHB9 627 aaKnown RBP13.18□□□□□ -0.3
MCF2L-202ENST00000375597 REXO2Q9Y3B8 237 aaKnown RBP13.18□□□□□ -0.3
MCF2L-202ENST00000375597 SIPA1L3O60292 1781 aaPredicted RBP13.17□□□□□ -0.3
MCF2L-202ENST00000375597 RGPD5Q99666 1765 aa13.17□□□□□ -0.3
MCF2L-202ENST00000375597 GOLGA6BA6NDN3 693 aa13.17□□□□□ -0.3
MCF2L-202ENST00000375597 KRT86O43790 486 aa13.17□□□□□ -0.3
MCF2L-202ENST00000375597 CLSTN1O94985 981 aa13.17□□□□□ -0.3
MCF2L-202ENST00000375597 ARHGAP25P42331 645 aa13.17□□□□□ -0.3
MCF2L-202ENST00000375597 MECOMQ03112 1051 aa13.17□□□□□ -0.3
MCF2L-202ENST00000375597 PDCLQ13371 301 aa13.17□□□□□ -0.3
MCF2L-202ENST00000375597 ZNF444Q8N0Y2 327 aaPredicted RBP13.17□□□□□ -0.3
MCF2L-202ENST00000375597 GSDMAQ96QA5 445 aa13.17□□□□□ -0.3
MCF2L-202ENST00000375597 RNF26Q9BY78 433 aaPredicted RBP13.17□□□□□ -0.3
MCF2L-202ENST00000375597 DMGDHQ9UI17 866 aaKnown RBP13.17□□□□□ -0.3
MCF2L-202ENST00000375597 L1RE1Q9UN81 338 aa13.17□□□□□ -0.3
MCF2L-202ENST00000375597 SPATA31A3Q5VYP0 1347 aa13.17□□□□□ -0.3
MCF2L-202ENST00000375597 CCDC70Q6NSX1 233 aa13.17□□□□□ -0.3
MCF2L-202ENST00000375597 BLIDQ8IZY5 108 aa13.17□□□□□ -0.3
MCF2L-202ENST00000375597 GOLGA5Q8TBA6 731 aa13.17□□□□□ -0.3
MCF2L-202ENST00000375597 LRRC1Q9BTT6 524 aa13.17□□□□□ -0.3
MCF2L-202ENST00000375597 IFIH1Q9BYX4 1025 aaKnown RBP13.17□□□□□ -0.3
MCF2L-202ENST00000375597 TCP11L1Q9NUJ3 509 aa13.17□□□□□ -0.3
MCF2L-202ENST00000375597 AFDNP55196 1824 aaKnown RBP13.17□□□□□ -0.3
MCF2L-202ENST00000375597 TMCO5BA8MYB1 307 aa13.17□□□□□ -0.3
MCF2L-202ENST00000375597 EIF3CLB5ME19 914 aaKnown RBP13.17□□□□□ -0.3
MCF2L-202ENST00000375597 NOP2P46087 812 aaKnown RBP13.17□□□□□ -0.3
MCF2L-202ENST00000375597 APTXQ7Z2E3 356 aaKnown RBP13.17□□□□□ -0.3
MCF2L-202ENST00000375597 MB21D1Q8N884 522 aa13.17□□□□□ -0.3
MCF2L-202ENST00000375597 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.17□□□□□ -0.3
MCF2L-202ENST00000375597 EIF3CQ99613 913 aaKnown RBP13.17□□□□□ -0.3
MCF2L-202ENST00000375597 SEPT11Q9NVA2 429 aaKnown RBP13.17□□□□□ -0.3
MCF2L-202ENST00000375597 CAPN6Q9Y6Q1 641 aa13.17□□□□□ -0.3
MCF2L-202ENST00000375597 MROH5Q6ZUA9 1318 aa13.16□□□□□ -0.3
MCF2L-202ENST00000375597 POTEMA6NI47 508 aa13.16□□□□□ -0.3
MCF2L-202ENST00000375597 KRT18P05783 430 aaKnown RBP13.16□□□□□ -0.3
MCF2L-202ENST00000375597 EPS15P42566 896 aa13.16□□□□□ -0.3
MCF2L-202ENST00000375597 GNGT1P63211 74 aa13.16□□□□□ -0.3
MCF2L-202ENST00000375597 TXNRD1Q16881 649 aa13.16□□□□□ -0.3
MCF2L-202ENST00000375597 TCERG1LQ5VWI1 586 aa13.16□□□□□ -0.3
MCF2L-202ENST00000375597 NAA35Q5VZE5 725 aa13.16□□□□□ -0.3
MCF2L-202ENST00000375597 SRLQ86TD4 932 aa13.16□□□□□ -0.3
MCF2L-202ENST00000375597 BCAS4Q8TDM0 211 aa13.16□□□□□ -0.3
MCF2L-202ENST00000375597 COA7Q96BR5 231 aa13.16□□□□□ -0.3
MCF2L-202ENST00000375597 PHF20Q9BVI0 1012 aa13.16□□□□□ -0.3
MCF2L-202ENST00000375597 SELENOOQ9BVL4 669 aa13.16□□□□□ -0.3
MCF2L-202ENST00000375597 MPHOSPH10O00566 681 aaKnown RBP13.16□□□□□ -0.3
MCF2L-202ENST00000375597 EPHB6O15197 1021 aa13.16□□□□□ -0.3
MCF2L-202ENST00000375597 KRT14P02533 472 aa13.16□□□□□ -0.3
MCF2L-202ENST00000375597 HERVK_113P62684 666 aa13.16□□□□□ -0.3
MCF2L-202ENST00000375597 GFPT1Q06210 699 aaPredicted RBP13.16□□□□□ -0.3
MCF2L-202ENST00000375597 TROAPQ12815 778 aa13.16□□□□□ -0.3
MCF2L-202ENST00000375597 TMTC3Q6ZXV5 915 aa13.16□□□□□ -0.3
MCF2L-202ENST00000375597 LRRC47Q8N1G4 583 aaKnown RBP13.16□□□□□ -0.3
MCF2L-202ENST00000375597 UHMK1Q8TAS1 419 aaKnown RBP13.16□□□□□ -0.3
MCF2L-202ENST00000375597 C5P01031 1676 aa13.16□□□□□ -0.3
MCF2L-202ENST00000375597 CAMTA1Q9Y6Y1 1673 aa13.16□□□□□ -0.3
MCF2L-202ENST00000375597 RTL9Q8NET4 1388 aa13.16□□□□□ -0.3
MCF2L-202ENST00000375597 GTPBP6O43824 516 aaPredicted RBP13.16□□□□□ -0.3
MCF2L-202ENST00000375597 CYLC1P35663 651 aaPredicted RBP13.16□□□□□ -0.3
MCF2L-202ENST00000375597 GTF2A1P52655 376 aaPredicted RBP13.16□□□□□ -0.3
MCF2L-202ENST00000375597 PRPF4BQ13523 1007 aaKnown RBP13.16□□□□□ -0.3
MCF2L-202ENST00000375597 TTC31Q49AM3 519 aaPredicted RBP13.16□□□□□ -0.3
MCF2L-202ENST00000375597 CCDC40Q4G0X9 1142 aa13.16□□□□□ -0.3
MCF2L-202ENST00000375597 ANKRD40Q6AI12 368 aa13.16□□□□□ -0.3
MCF2L-202ENST00000375597 CABP7Q86V35 215 aa13.16□□□□□ -0.3
MCF2L-202ENST00000375597 SECISBP2LQ93073 1101 aaKnown RBP13.16□□□□□ -0.3
MCF2L-202ENST00000375597 EXOC4Q96A65 974 aa13.16□□□□□ -0.3
MCF2L-202ENST00000375597 FERMT2Q96AC1 680 aa13.16□□□□□ -0.3
MCF2L-202ENST00000375597 HYOU1Q9Y4L1 999 aa13.16□□□□□ -0.3
MCF2L-202ENST00000375597 EIF4A3P38919 411 aaKnown RBP13.15□□□□□ -0.3
MCF2L-202ENST00000375597 TBC1D10BQ4KMP7 808 aaPredicted RBP13.15□□□□□ -0.3
MCF2L-202ENST00000375597 SOGA3Q5TF21 947 aa13.15□□□□□ -0.3
MCF2L-202ENST00000375597 TRIML1Q8N9V2 468 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms