RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 H7C0C1 242 aa10.68□□□□□ -0.7
CHD3-202ENST00000358181 ATP5OP48047 213 aa10.68□□□□□ -0.7
CHD3-202ENST00000358181 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.68□□□□□ -0.72e-6■□□□□ 10
CHD3-202ENST00000358181 LGR6Q9HBX8 967 aa10.68□□□□□ -0.7
CHD3-202ENST00000358181 ZKSCAN5Q9Y2L8 839 aa10.68□□□□□ -0.7
CHD3-202ENST00000358181 CFAP69A5D8W1 941 aa10.68□□□□□ -0.7
CHD3-202ENST00000358181 SKILP12757 684 aa10.68□□□□□ -0.7
CHD3-202ENST00000358181 ADCY1Q08828 1119 aa10.68□□□□□ -0.7
CHD3-202ENST00000358181 DDX53Q86TM3 631 aaKnown RBP10.68□□□□□ -0.7
CHD3-202ENST00000358181 BBS5Q8N3I7 341 aa10.68□□□□□ -0.7
CHD3-202ENST00000358181 PPWD1Q96BP3 646 aaKnown RBP10.68□□□□□ -0.7
CHD3-202ENST00000358181 CCDC138Q96M89 665 aa10.68□□□□□ -0.7
CHD3-202ENST00000358181 DHX29Q7Z478 1369 aaKnown RBP10.68□□□□□ -0.7
CHD3-202ENST00000358181 NEMFO60524 1076 aa10.68□□□□□ -0.7
CHD3-202ENST00000358181 ABCB4P21439 1286 aa10.68□□□□□ -0.7
CHD3-202ENST00000358181 SLC1A4P43007 532 aa10.68□□□□□ -0.7
CHD3-202ENST00000358181 TSNAXIP1Q2TAA8 658 aa10.68□□□□□ -0.7
CHD3-202ENST00000358181 MFSD4BQ5TF39 518 aa10.68□□□□□ -0.7
CHD3-202ENST00000358181 KSR2Q6VAB6 950 aa10.68□□□□□ -0.7
CHD3-202ENST00000358181 EEPD1Q7L9B9 569 aa10.68□□□□□ -0.7
CHD3-202ENST00000358181 SNX25Q9H3E2 840 aa10.68□□□□□ -0.7
CHD3-202ENST00000358181 ARMT1Q9H993 441 aa10.68□□□□□ -0.7
CHD3-202ENST00000358181 COPRSQ9NQ92 184 aa10.68□□□□□ -0.7
CHD3-202ENST00000358181 DOK7Q18PE1 504 aa10.68□□□□□ -0.7
CHD3-202ENST00000358181 C1orf131Q8NDD1 294 aaKnown RBP10.68□□□□□ -0.7
CHD3-202ENST00000358181 GBP5Q96PP8 586 aa10.68□□□□□ -0.7
CHD3-202ENST00000358181 FBXL5Q9UKA1 691 aa10.68□□□□□ -0.7
CHD3-202ENST00000358181 FAF1Q9UNN5 650 aaPredicted RBP10.68□□□□□ -0.7
CHD3-202ENST00000358181 LRRIQ4A6NIV6 560 aa10.68□□□□□ -0.7
CHD3-202ENST00000358181 MXD4Q14582 209 aaPredicted RBP10.68□□□□□ -0.7
CHD3-202ENST00000358181 UHMK1Q8TAS1 419 aaKnown RBP10.68□□□□□ -0.7
CHD3-202ENST00000358181 DDX41Q9UJV9 622 aaKnown RBP10.68□□□□□ -0.7
CHD3-202ENST00000358181 WDR64B1ANS9 1081 aa10.67□□□□□ -0.7
CHD3-202ENST00000358181 CREB3O43889 395 aa10.67□□□□□ -0.7
CHD3-202ENST00000358181 RCN2Q14257 317 aa10.67□□□□□ -0.7
CHD3-202ENST00000358181 TTC19Q6DKK2 380 aaPredicted RBP10.67□□□□□ -0.7
CHD3-202ENST00000358181 CHMP1BQ7LBR1 199 aa10.67□□□□□ -0.7
CHD3-202ENST00000358181 RPGRIP1Q96KN7 1286 aa10.67□□□□□ -0.7
CHD3-202ENST00000358181 IFT122Q9HBG6 1241 aa10.67□□□□□ -0.7
CHD3-202ENST00000358181 SLC12A6Q9UHW9 1150 aa10.67□□□□□ -0.7
CHD3-202ENST00000358181 TMEM247A6NEH6 219 aa10.67□□□□□ -0.7
CHD3-202ENST00000358181 PRDM1O75626 825 aa10.67□□□□□ -0.7
CHD3-202ENST00000358181 BMP15O95972 392 aa10.67□□□□□ -0.7
CHD3-202ENST00000358181 FLOT2Q14254 428 aa10.67□□□□□ -0.7
CHD3-202ENST00000358181 SLMAPQ14BN4 828 aa10.67□□□□□ -0.7
CHD3-202ENST00000358181 FRA10AC1Q70Z53 315 aa10.67□□□□□ -0.7
CHD3-202ENST00000358181 RGL1Q9NZL6 768 aa10.67□□□□□ -0.7
CHD3-202ENST00000358181 HESX1Q9UBX0 185 aa10.67□□□□□ -0.7
CHD3-202ENST00000358181 HMGB1P1B2RPK0 211 aaPredicted RBP10.67□□□□□ -0.7
CHD3-202ENST00000358181 HIP1RO75146 1068 aa10.67□□□□□ -0.7
CHD3-202ENST00000358181 POLGP54098 1239 aaPredicted RBP10.67□□□□□ -0.7
CHD3-202ENST00000358181 GOLGA8FQ08AF8 430 aa10.67□□□□□ -0.7
CHD3-202ENST00000358181 GOLGA8DPQ0D2H9 430 aa10.67□□□□□ -0.7
CHD3-202ENST00000358181 TMC2Q8TDI7 906 aa10.67□□□□□ -0.7
CHD3-202ENST00000358181 NCLNQ969V3 563 aa10.67□□□□□ -0.7
CHD3-202ENST00000358181 HMGXB3Q12766 1538 aa10.67□□□□□ -0.7
CHD3-202ENST00000358181 TRPA1O75762 1119 aa10.67□□□□□ -0.7
CHD3-202ENST00000358181 DDHD2O94830 711 aa10.67□□□□□ -0.7
CHD3-202ENST00000358181 GARSP41250 739 aaKnown RBP10.67□□□□□ -0.7
CHD3-202ENST00000358181 PRIM1P49642 420 aaKnown RBP10.67□□□□□ -0.7
CHD3-202ENST00000358181 YWHAEP62258 255 aaKnown RBP10.67□□□□□ -0.7
CHD3-202ENST00000358181 ZSCAN23Q3MJ62 389 aa10.67□□□□□ -0.7
CHD3-202ENST00000358181 HAUS3Q68CZ6 603 aa10.67□□□□□ -0.7
CHD3-202ENST00000358181 POLR3CQ9BUI4 534 aaPredicted RBP10.67□□□□□ -0.7
CHD3-202ENST00000358181 CCDC159P0C7I6 412 aa10.67□□□□□ -0.7
CHD3-202ENST00000358181 HOXC9P31274 260 aa10.67□□□□□ -0.7
CHD3-202ENST00000358181 ARHGAP24Q8N264 748 aa10.67□□□□□ -0.7
CHD3-202ENST00000358181 ESYT1Q9BSJ8 1104 aa10.67□□□□□ -0.7
CHD3-202ENST00000358181 C6orf203Q9P0P8 240 aaPredicted RBP10.67□□□□□ -0.7
CHD3-202ENST00000358181 DNM3Q9UQ16 869 aa10.67□□□□□ -0.7
CHD3-202ENST00000358181 OSBPP22059 807 aa10.67□□□□□ -0.7
CHD3-202ENST00000358181 OSTNP61366 133 aa10.67□□□□□ -0.7
CHD3-202ENST00000358181 PRKCQQ04759 706 aa10.67□□□□□ -0.7
CHD3-202ENST00000358181 LONRF2Q1L5Z9 754 aa10.67□□□□□ -0.7
CHD3-202ENST00000358181 NBPF20Q3BBV1 942 aa10.67□□□□□ -0.7
CHD3-202ENST00000358181 NBPF10Q6P3W6 841 aaKnown RBP10.67□□□□□ -0.7
CHD3-202ENST00000358181 C11orf74Q86VG3 221 aa10.67□□□□□ -0.7
CHD3-202ENST00000358181 C7orf31Q8N865 590 aa10.67□□□□□ -0.7
CHD3-202ENST00000358181 TGFBRAP1Q8WUH2 860 aa10.67□□□□□ -0.7
CHD3-202ENST00000358181 OSBPL10Q9BXB5 764 aa10.67□□□□□ -0.7
CHD3-202ENST00000358181 SLC38A10Q9HBR0 1119 aa10.67□□□□□ -0.7
CHD3-202ENST00000358181 GPC4O75487 556 aa10.66□□□□□ -0.7
CHD3-202ENST00000358181 MBD4O95243 580 aa10.66□□□□□ -0.7
CHD3-202ENST00000358181 MAP3K7CLP57077 242 aa10.66□□□□□ -0.7
CHD3-202ENST00000358181 C16orf72Q14CZ0 275 aa10.66□□□□□ -0.7
CHD3-202ENST00000358181 XKR9Q5GH70 373 aa10.66□□□□□ -0.7
CHD3-202ENST00000358181 C8orf74Q6P047 294 aa10.66□□□□□ -0.7
CHD3-202ENST00000358181 PDZD4Q76G19 769 aaPredicted RBP10.66□□□□□ -0.7
CHD3-202ENST00000358181 NPATQ14207 1427 aa10.66□□□□□ -0.7
CHD3-202ENST00000358181 ACTN1P12814 892 aa10.66□□□□□ -0.7
CHD3-202ENST00000358181 THOC5Q13769 683 aaKnown RBP10.66□□□□□ -0.7
CHD3-202ENST00000358181 RINT1Q6NUQ1 792 aa10.66□□□□□ -0.7
CHD3-202ENST00000358181 MAPKAPK5Q8IW41 473 aa10.66□□□□□ -0.7
CHD3-202ENST00000358181 GOLGA5Q8TBA6 731 aa10.66□□□□□ -0.7
CHD3-202ENST00000358181 OTUD7AQ8TE49 926 aaPredicted RBP10.66□□□□□ -0.7
CHD3-202ENST00000358181 SARS2Q9NP81 518 aaKnown RBP10.66□□□□□ -0.7
CHD3-202ENST00000358181 SEPT9Q9UHD8 586 aaPredicted RBP10.66□□□□□ -0.7
CHD3-202ENST00000358181 RNMTO43148 476 aaKnown RBP10.66□□□□□ -0.7
CHD3-202ENST00000358181 SCNN1DP51172 638 aa10.66□□□□□ -0.7
CHD3-202ENST00000358181 KCNQ4P56696 695 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms