RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 SPAG1Q07617 926 aa28.49■■■□□ 2.15
HOXB3-201ENST00000311626 LAMB1P07942 1786 aa28.49■■■□□ 2.15
HOXB3-201ENST00000311626 KLRF2D3W0D1 207 aa28.49■■■□□ 2.15
HOXB3-201ENST00000311626 NRAPQ86VF7 1730 aa28.49■■■□□ 2.15
HOXB3-201ENST00000311626 GPIHBP1Q8IV16 184 aa28.49■■■□□ 2.15
HOXB3-201ENST00000311626 MB21D1Q8N884 522 aa28.49■■■□□ 2.15
HOXB3-201ENST00000311626 FUT8Q9BYC5 575 aa28.49■■■□□ 2.15
HOXB3-201ENST00000311626 TTF2Q9UNY4 1162 aaKnown RBP28.49■■■□□ 2.15
HOXB3-201ENST00000311626 CNTNAP4Q9C0A0 1308 aa28.48■■■□□ 2.15
HOXB3-201ENST00000311626 B4DLN1 442 aa28.48■■■□□ 2.15
HOXB3-201ENST00000311626 RASA1P20936 1047 aa28.48■■■□□ 2.15
HOXB3-201ENST00000311626 SMC1AQ14683 1233 aaKnown RBP28.48■■■□□ 2.15
HOXB3-201ENST00000311626 LONRF2Q1L5Z9 754 aa28.48■■■□□ 2.15
HOXB3-201ENST00000311626 BARHL2Q9NY43 387 aa28.48■■■□□ 2.15
HOXB3-201ENST00000311626 H7C1D1 291 aa28.48■■■□□ 2.15
HOXB3-201ENST00000311626 ENC1O14682 589 aa28.48■■■□□ 2.15
HOXB3-201ENST00000311626 CCNT1O60563 726 aaKnown RBP28.48■■■□□ 2.15
HOXB3-201ENST00000311626 PLCG1P19174 1290 aa28.48■■■□□ 2.15
HOXB3-201ENST00000311626 ST5P78524 1137 aa28.48■■■□□ 2.15
HOXB3-201ENST00000311626 TXNRD1Q16881 649 aa28.48■■■□□ 2.15
HOXB3-201ENST00000311626 NCAPH2Q6IBW4 605 aa28.48■■■□□ 2.15
HOXB3-201ENST00000311626 PYM1Q9BRP8 204 aaKnown RBP28.48■■■□□ 2.15
HOXB3-201ENST00000311626 SH3GLB2Q9NR46 395 aa28.48■■■□□ 2.15
HOXB3-201ENST00000311626 PDS5AQ29RF7 1337 aaKnown RBP28.47■■■□□ 2.15
HOXB3-201ENST00000311626 FECHP22830 423 aa28.47■■■□□ 2.15
HOXB3-201ENST00000311626 NAPAP54920 295 aa28.47■■■□□ 2.15
HOXB3-201ENST00000311626 HDAC6Q9UBN7 1215 aa28.47■■■□□ 2.15
HOXB3-201ENST00000311626 CCDC178Q5BJE1 867 aa28.46■■■□□ 2.15
HOXB3-201ENST00000311626 NAPGQ99747 312 aaPredicted RBP28.46■■■□□ 2.15
HOXB3-201ENST00000311626 UBA5Q9GZZ9 404 aa28.46■■■□□ 2.15
HOXB3-201ENST00000311626 RNF216Q9NWF9 866 aaPredicted RBP28.46■■■□□ 2.15
HOXB3-201ENST00000311626 EPN1Q9Y6I3 576 aaPredicted RBP28.46■■■□□ 2.15
HOXB3-201ENST00000311626 FCER1AP12319 257 aa28.46■■■□□ 2.15
HOXB3-201ENST00000311626 AGPAT5Q9NUQ2 364 aa28.46■■■□□ 2.15
HOXB3-201ENST00000311626 TECP42680 631 aa28.45■■■□□ 2.15
HOXB3-201ENST00000311626 CABP7Q86V35 215 aa28.45■■■□□ 2.15
HOXB3-201ENST00000311626 CCNL1Q9UK58 526 aaPredicted RBP28.45■■■□□ 2.15
HOXB3-201ENST00000311626 PALM3A6NDB9 673 aaPredicted RBP28.45■■■□□ 2.14
HOXB3-201ENST00000311626 NDUFA10O95299 355 aa28.45■■■□□ 2.14
HOXB3-201ENST00000311626 C8orf37Q96NL8 207 aa28.45■■■□□ 2.14
HOXB3-201ENST00000311626 RTCBQ9Y3I0 505 aaKnown RBP28.45■■■□□ 2.14
HOXB3-201ENST00000311626 MCM6Q14566 821 aa28.44■■■□□ 2.14
HOXB3-201ENST00000311626 JAKMIP3Q5VZ66 844 aa28.44■■■□□ 2.14
HOXB3-201ENST00000311626 WDR66Q8TBY9 1149 aa28.44■■■□□ 2.14
HOXB3-201ENST00000311626 DUSP9Q99956 384 aaKnown RBP28.44■■■□□ 2.14
HOXB3-201ENST00000311626 KBTBD4Q9NVX7 518 aa28.44■■■□□ 2.14
HOXB3-201ENST00000311626 TMEM260Q9NX78 707 aa28.44■■■□□ 2.14
HOXB3-201ENST00000311626 BIN2Q9UBW5 565 aaPredicted RBP28.44■■■□□ 2.14
HOXB3-201ENST00000311626 CCDC88AQ3V6T2 1871 aa28.44■■■□□ 2.14
HOXB3-201ENST00000311626 SMCO2A6NFE2 343 aa28.44■■■□□ 2.14
HOXB3-201ENST00000311626 LGALS16A8MUM7 142 aa28.44■■■□□ 2.14
HOXB3-201ENST00000311626 STK4Q13043 487 aa28.44■■■□□ 2.14
HOXB3-201ENST00000311626 CEP112Q8N8E3 955 aa28.44■■■□□ 2.14
HOXB3-201ENST00000311626 NOA1Q8NC60 698 aaKnown RBP28.44■■■□□ 2.14
HOXB3-201ENST00000311626 ANKS1AQ92625 1134 aa28.44■■■□□ 2.14
HOXB3-201ENST00000311626 LUC7L2Q9Y383 392 aaKnown RBP28.44■■■□□ 2.14
HOXB3-201ENST00000311626 AHDC1Q5TGY3 1603 aaPredicted RBP28.43■■■□□ 2.14
HOXB3-201ENST00000311626 BAG3O95817 575 aa28.43■■■□□ 2.14
HOXB3-201ENST00000311626 BTDP43251 543 aa28.43■■■□□ 2.14
HOXB3-201ENST00000311626 GNAQP50148 359 aa28.43■■■□□ 2.14
HOXB3-201ENST00000311626 WDR59Q6PJI9 974 aa28.43■■■□□ 2.14
HOXB3-201ENST00000311626 AMOTL1Q8IY63 956 aa28.43■■■□□ 2.14
HOXB3-201ENST00000311626 CCDC148Q8NFR7 591 aa28.43■■■□□ 2.14
HOXB3-201ENST00000311626 NEK11Q8NG66 645 aa28.43■■■□□ 2.14
HOXB3-201ENST00000311626 EYA3Q99504 573 aa28.43■■■□□ 2.14
HOXB3-201ENST00000311626 H3BQF6 201 aa28.43■■■□□ 2.14
HOXB3-201ENST00000311626 ERCC3P19447 782 aa28.43■■■□□ 2.14
HOXB3-201ENST00000311626 CDK8P49336 464 aa28.43■■■□□ 2.14
HOXB3-201ENST00000311626 PDE4DQ08499 809 aa28.43■■■□□ 2.14
HOXB3-201ENST00000311626 TTI2Q6NXR4 508 aa28.43■■■□□ 2.14
HOXB3-201ENST00000311626 CSGALNACT2Q8N6G5 542 aa28.43■■■□□ 2.14
HOXB3-201ENST00000311626 OR8K1Q8NGG5 319 aa28.43■■■□□ 2.14
HOXB3-201ENST00000311626 ZNF507Q8TCN5 953 aa28.43■■■□□ 2.14
HOXB3-201ENST00000311626 ASIC1P78348 528 aa28.42■■■□□ 2.14
HOXB3-201ENST00000311626 ANKRD40Q6AI12 368 aa28.42■■■□□ 2.14
HOXB3-201ENST00000311626 GIMAP8Q8ND71 665 aaPredicted RBP28.42■■■□□ 2.14
HOXB3-201ENST00000311626 UBXN6Q9BZV1 441 aa28.42■■■□□ 2.14
HOXB3-201ENST00000311626 MAGEC2Q9UBF1 373 aaPredicted RBP28.42■■■□□ 2.14
HOXB3-201ENST00000311626 PSMA7O14818 248 aa28.42■■■□□ 2.14
HOXB3-201ENST00000311626 SRGAP2O75044 1071 aa28.42■■■□□ 2.14
HOXB3-201ENST00000311626 PIGSQ96S52 555 aa28.42■■■□□ 2.14
HOXB3-201ENST00000311626 FLT1P17948 1338 aa28.42■■■□□ 2.14
HOXB3-201ENST00000311626 RHOBTB3O94955 611 aa28.41■■■□□ 2.14
HOXB3-201ENST00000311626 PCMTD1Q96MG8 357 aaPredicted RBP28.41■■■□□ 2.14
HOXB3-201ENST00000311626 CCSER1Q9C0I3 900 aa28.41■■■□□ 2.14
HOXB3-201ENST00000311626 ABCB6Q9NP58 842 aa28.41■■■□□ 2.14
HOXB3-201ENST00000311626 HERVK_113P62684 666 aa28.41■■■□□ 2.14
HOXB3-201ENST00000311626 TRIM14Q14142 442 aa28.41■■■□□ 2.14
HOXB3-201ENST00000311626 TUBGCP2Q9BSJ2 902 aa28.41■■■□□ 2.14
HOXB3-201ENST00000311626 RTFDC1Q9BY42 306 aaPredicted RBP28.41■■■□□ 2.14
HOXB3-201ENST00000311626 FRMPD2Q68DX3 1309 aaPredicted RBP28.41■■■□□ 2.14
HOXB3-201ENST00000311626 RASSF10A6NK89 507 aa28.4■■■□□ 2.14
HOXB3-201ENST00000311626 CYP2C19P33261 490 aa28.4■■■□□ 2.14
HOXB3-201ENST00000311626 VSNL1P62760 191 aa28.4■■■□□ 2.14
HOXB3-201ENST00000311626 GPSM2P81274 684 aa28.4■■■□□ 2.14
HOXB3-201ENST00000311626 STIM1Q13586 685 aa28.4■■■□□ 2.14
HOXB3-201ENST00000311626 ZKSCAN7Q9P0L1 754 aaPredicted RBP28.4■■■□□ 2.14
HOXB3-201ENST00000311626 OR52Z1P0C646 297 aa28.4■■■□□ 2.14
HOXB3-201ENST00000311626 KCNB1Q14721 858 aa28.4■■■□□ 2.14
HOXB3-201ENST00000311626 TEX11Q8IYF3 940 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms