RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 CLIC6Q96NY7 704 aa18.71■□□□□ 0.59
TPM1-201ENST00000267996 PITPNM2Q9BZ72 1349 aa18.71■□□□□ 0.59
TPM1-201ENST00000267996 KINO60870 393 aaKnown RBP18.7■□□□□ 0.58
TPM1-201ENST00000267996 PFKFB1P16118 471 aa18.7■□□□□ 0.58
TPM1-201ENST00000267996 ATP2C1P98194 919 aaPredicted RBP18.7■□□□□ 0.58
TPM1-201ENST00000267996 ZNF174Q15697 407 aa18.7■□□□□ 0.58
TPM1-201ENST00000267996 CAMK4Q16566 473 aa18.7■□□□□ 0.58
TPM1-201ENST00000267996 RBSNQ9H1K0 784 aa18.7■□□□□ 0.58
TPM1-201ENST00000267996 RIC8AQ9NPQ8 531 aa18.7■□□□□ 0.58
TPM1-201ENST00000267996 ADARB2Q9NS39 739 aaKnown RBP18.7■□□□□ 0.58
TPM1-201ENST00000267996 GGA3Q9NZ52 723 aa18.7■□□□□ 0.58
TPM1-201ENST00000267996 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.7■□□□□ 0.58
TPM1-201ENST00000267996 TMEM232C9JQI7 657 aa18.69■□□□□ 0.58
TPM1-201ENST00000267996 PLA2G6O60733 806 aa18.69■□□□□ 0.58
TPM1-201ENST00000267996 ADCY7P51828 1080 aa18.69■□□□□ 0.58
TPM1-201ENST00000267996 CDC37Q16543 378 aaPredicted RBP18.69■□□□□ 0.58
TPM1-201ENST00000267996 FERMT2Q96AC1 680 aa18.69■□□□□ 0.58
TPM1-201ENST00000267996 ZNF341Q9BYN7 854 aa18.69■□□□□ 0.58
TPM1-201ENST00000267996 UTRNP46939 3433 aa18.69■□□□□ 0.58
TPM1-201ENST00000267996 GRIN1Q05586 938 aa18.69■□□□□ 0.58
TPM1-201ENST00000267996 SPICE1Q8N0Z3 855 aa18.69■□□□□ 0.58
TPM1-201ENST00000267996 REXO1Q8N1G1 1221 aaKnown RBP18.69■□□□□ 0.58
TPM1-201ENST00000267996 C4orf32Q8N8J7 132 aa18.69■□□□□ 0.58
TPM1-201ENST00000267996 TIGD1Q96MW7 591 aa18.69■□□□□ 0.58
TPM1-201ENST00000267996 GLIS2Q9BZE0 524 aaPredicted RBP18.69■□□□□ 0.58
TPM1-201ENST00000267996 MRVI1Q9Y6F6 885 aa18.69■□□□□ 0.58
TPM1-201ENST00000267996 ZNF202O95125 648 aa18.68■□□□□ 0.58
TPM1-201ENST00000267996 LMOD1P29536 600 aaPredicted RBP18.68■□□□□ 0.58
TPM1-201ENST00000267996 PTGDRQ13258 359 aa18.68■□□□□ 0.58
TPM1-201ENST00000267996 NONOQ15233 471 aaKnown RBP eCLIP18.68■□□□□ 0.58
TPM1-201ENST00000267996 CLK2P49760 499 aaKnown RBP18.67■□□□□ 0.58
TPM1-201ENST00000267996 INF2Q27J81 1249 aa18.67■□□□□ 0.58
TPM1-201ENST00000267996 GLT8D2Q9H1C3 349 aa18.67■□□□□ 0.58
TPM1-201ENST00000267996 PRR12Q9ULL5 1215 aa18.67■□□□□ 0.58
TPM1-201ENST00000267996 INPP5BP32019 993 aa18.66■□□□□ 0.58
TPM1-201ENST00000267996 SYKP43405 635 aa18.66■□□□□ 0.58
TPM1-201ENST00000267996 STAT2P52630 851 aa18.66■□□□□ 0.58
TPM1-201ENST00000267996 MRPL12P52815 198 aaKnown RBP18.66■□□□□ 0.58
TPM1-201ENST00000267996 FAM83BQ5T0W9 1011 aa18.66■□□□□ 0.58
TPM1-201ENST00000267996 ARL6IP4Q66PJ3 421 aaKnown RBP18.66■□□□□ 0.58
TPM1-201ENST00000267996 CCDC84Q86UT8 332 aaPredicted RBP18.66■□□□□ 0.58
TPM1-201ENST00000267996 L3MBTL3Q96JM7 780 aaPredicted RBP18.66■□□□□ 0.58
TPM1-201ENST00000267996 AMNQ9BXJ7 453 aa18.66■□□□□ 0.58
TPM1-201ENST00000267996 KIAA1683Q9H0B3 1180 aa18.66■□□□□ 0.58
TPM1-201ENST00000267996 PCDHA1Q9Y5I3 950 aa18.66■□□□□ 0.58
TPM1-201ENST00000267996 DOCK1Q14185 1865 aa18.66■□□□□ 0.58
TPM1-201ENST00000267996 CCDC192P0DO97 292 aa18.66■□□□□ 0.58
TPM1-201ENST00000267996 MCM7P33993 719 aa18.66■□□□□ 0.58
TPM1-201ENST00000267996 ORC2Q13416 577 aaPredicted RBP18.66■□□□□ 0.58
TPM1-201ENST00000267996 CKAP2LQ8IYA6 745 aa18.66■□□□□ 0.58
TPM1-201ENST00000267996 CHURC1Q8WUH1 139 aa18.66■□□□□ 0.58
TPM1-201ENST00000267996 CUL5Q93034 780 aa18.66■□□□□ 0.58
TPM1-201ENST00000267996 CSRNP2Q9H175 543 aa18.66■□□□□ 0.58
TPM1-201ENST00000267996 BIN2Q9UBW5 565 aaPredicted RBP18.66■□□□□ 0.58
TPM1-201ENST00000267996 KCNH3Q9ULD8 1083 aa18.66■□□□□ 0.58
TPM1-201ENST00000267996 ZC3H4Q9UPT8 1303 aaKnown RBP18.66■□□□□ 0.58
TPM1-201ENST00000267996 POLR2AP24928 1970 aaKnown RBP18.65■□□□□ 0.58
TPM1-201ENST00000267996 SSC5DA1L4H1 1573 aa18.65■□□□□ 0.58
TPM1-201ENST00000267996 IKQ13123 557 aaPredicted RBP18.65■□□□□ 0.58
TPM1-201ENST00000267996 JAKMIP3Q5VZ66 844 aa18.65■□□□□ 0.58
TPM1-201ENST00000267996 FAM160B2Q86V87 743 aa18.65■□□□□ 0.58
TPM1-201ENST00000267996 FBXO11Q86XK2 927 aa18.65■□□□□ 0.58
TPM1-201ENST00000267996 SCYL3Q8IZE3 742 aa18.65■□□□□ 0.58
TPM1-201ENST00000267996 WDR18Q9BV38 432 aa18.65■□□□□ 0.58
TPM1-201ENST00000267996 PSTPIP2Q9H939 334 aa18.65■□□□□ 0.58
TPM1-201ENST00000267996 TMEM260Q9NX78 707 aa18.65■□□□□ 0.58
TPM1-201ENST00000267996 FAM13BQ9NYF5 915 aa18.65■□□□□ 0.58
TPM1-201ENST00000267996 TYRO3Q06418 890 aa18.64■□□□□ 0.57
TPM1-201ENST00000267996 SUPT20HL1Q3ZLR7 823 aa18.64■□□□□ 0.57
TPM1-201ENST00000267996 PRAMEF18Q5VWM3 479 aa18.64■□□□□ 0.57
TPM1-201ENST00000267996 NEK8Q86SG6 692 aa18.64■□□□□ 0.57
TPM1-201ENST00000267996 ELOA2Q8IYF1 753 aaPredicted RBP18.64■□□□□ 0.57
TPM1-201ENST00000267996 LPAR1Q92633 364 aa18.64■□□□□ 0.57
TPM1-201ENST00000267996 FEM1BQ9UK73 627 aa18.64■□□□□ 0.57
TPM1-201ENST00000267996 LAD1O00515 517 aa18.63■□□□□ 0.57
TPM1-201ENST00000267996 EDIL3O43854 480 aa18.63■□□□□ 0.57
TPM1-201ENST00000267996 IL17AQ16552 155 aa18.63■□□□□ 0.57
TPM1-201ENST00000267996 SPECC1Q5M775 1068 aa18.63■□□□□ 0.57
TPM1-201ENST00000267996 DPY19L2Q6NUT2 758 aa18.63■□□□□ 0.57
TPM1-201ENST00000267996 TEX2Q8IWB9 1127 aa18.63■□□□□ 0.57
TPM1-201ENST00000267996 TBCKQ8TEA7 893 aa18.63■□□□□ 0.57
TPM1-201ENST00000267996 KLRG1Q96E93 195 aa18.63■□□□□ 0.57
TPM1-201ENST00000267996 SDF4Q9BRK5 362 aa18.63■□□□□ 0.57
TPM1-201ENST00000267996 RANBP17Q9H2T7 1088 aaKnown RBP18.63■□□□□ 0.57
TPM1-201ENST00000267996 WDR46O15213 610 aaKnown RBP18.63■□□□□ 0.57
TPM1-201ENST00000267996 PRPHP41219 470 aa18.63■□□□□ 0.57
TPM1-201ENST00000267996 SNAP25P60880 206 aa18.63■□□□□ 0.57
TPM1-201ENST00000267996 TRAF1Q13077 416 aa18.63■□□□□ 0.57
TPM1-201ENST00000267996 ZYXQ15942 572 aaKnown RBP18.63■□□□□ 0.57
TPM1-201ENST00000267996 USP49Q70CQ1 688 aa18.63■□□□□ 0.57
TPM1-201ENST00000267996 WRNIP1Q96S55 665 aa18.63■□□□□ 0.57
TPM1-201ENST00000267996 FEZ1Q99689 392 aa18.63■□□□□ 0.57
TPM1-201ENST00000267996 UBE2SQ16763 222 aa18.62■□□□□ 0.57
TPM1-201ENST00000267996 NOL9Q5SY16 702 aaKnown RBP18.62■□□□□ 0.57
TPM1-201ENST00000267996 PANK2Q9BZ23 570 aa18.62■□□□□ 0.57
TPM1-201ENST00000267996 TMEM60Q9H2L4 133 aa18.62■□□□□ 0.57
TPM1-201ENST00000267996 SRCAPQ6ZRS2 3230 aa18.61■□□□□ 0.57
TPM1-201ENST00000267996 GRIN3BO60391 1043 aa18.61■□□□□ 0.57
TPM1-201ENST00000267996 PTPRAP18433 802 aa18.61■□□□□ 0.57
TPM1-201ENST00000267996 GPR162Q16538 588 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms