RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 RABEP2Q9H5N1 569 aa13.52□□□□□ -0.24
CHPF2-201ENST00000035307 LIFRP42702 1097 aa13.52□□□□□ -0.25
CHPF2-201ENST00000035307 HLTFQ14527 1009 aaKnown RBP eCLIP13.52□□□□□ -0.25
CHPF2-201ENST00000035307 KRT79Q5XKE5 535 aa13.52□□□□□ -0.25
CHPF2-201ENST00000035307 KRT222Q8N1A0 295 aa13.52□□□□□ -0.25
CHPF2-201ENST00000035307 PICK1Q9NRD5 415 aa13.52□□□□□ -0.25
CHPF2-201ENST00000035307 LUC7L2Q9Y383 392 aaKnown RBP13.52□□□□□ -0.25
CHPF2-201ENST00000035307 USP17L10C9JJH3 530 aa13.52□□□□□ -0.25
CHPF2-201ENST00000035307 BMP15O95972 392 aa13.52□□□□□ -0.25
CHPF2-201ENST00000035307 EEF2P13639 858 aaKnown RBP13.52□□□□□ -0.25
CHPF2-201ENST00000035307 CACNB1Q02641 598 aaPredicted RBP13.52□□□□□ -0.25
CHPF2-201ENST00000035307 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.52□□□□□ -0.25
CHPF2-201ENST00000035307 NBPF11Q86T75 865 aa13.52□□□□□ -0.25
CHPF2-201ENST00000035307 CSGALNACT2Q8N6G5 542 aa13.52□□□□□ -0.25
CHPF2-201ENST00000035307 SPAG5Q96R06 1193 aa13.52□□□□□ -0.25
CHPF2-201ENST00000035307 CCDC94Q9BW85 323 aaPredicted RBP13.52□□□□□ -0.25
CHPF2-201ENST00000035307 TSPYL1Q9H0U9 437 aa13.52□□□□□ -0.25
CHPF2-201ENST00000035307 ARHGEF10LQ9HCE6 1279 aa13.52□□□□□ -0.25
CHPF2-201ENST00000035307 SLIT2O94813 1529 aa13.52□□□□□ -0.25
CHPF2-201ENST00000035307 LRP6O75581 1613 aa13.51□□□□□ -0.25
CHPF2-201ENST00000035307 USP27XA6NNY8 438 aa13.51□□□□□ -0.25
CHPF2-201ENST00000035307 FMNL1O95466 1100 aaPredicted RBP13.51□□□□□ -0.25
CHPF2-201ENST00000035307 WWC2Q6AWC2 1192 aa13.51□□□□□ -0.25
CHPF2-201ENST00000035307 CERS5Q8N5B7 392 aa13.51□□□□□ -0.25
CHPF2-201ENST00000035307 TAF4BQ92750 862 aa13.51□□□□□ -0.25
CHPF2-201ENST00000035307 FAM107BQ9H098 131 aa13.51□□□□□ -0.25
CHPF2-201ENST00000035307 RMND1Q9NWS8 449 aa13.51□□□□□ -0.25
CHPF2-201ENST00000035307 PI4KBQ9UBF8 816 aa13.51□□□□□ -0.25
CHPF2-201ENST00000035307 EIF3JO75822 258 aaKnown RBP13.51□□□□□ -0.25
CHPF2-201ENST00000035307 FLOT1O75955 427 aa13.51□□□□□ -0.25
CHPF2-201ENST00000035307 TERF1P54274 439 aa13.51□□□□□ -0.25
CHPF2-201ENST00000035307 ARFGAP3Q9NP61 516 aa13.51□□□□□ -0.25
CHPF2-201ENST00000035307 DDX4Q9NQI0 724 aaKnown RBP13.51□□□□□ -0.25
CHPF2-201ENST00000035307 RNF181Q9P0P0 153 aa13.51□□□□□ -0.25
CHPF2-201ENST00000035307 RGPD1P0DJD0 1748 aa13.51□□□□□ -0.25
CHPF2-201ENST00000035307 DCAF8L1A6NGE4 600 aa13.51□□□□□ -0.25
CHPF2-201ENST00000035307 PP2D1A8MPX8 630 aa13.51□□□□□ -0.25
CHPF2-201ENST00000035307 ADCY7P51828 1080 aa13.51□□□□□ -0.25
CHPF2-201ENST00000035307 NBPF9Q3BBW0 867 aa13.51□□□□□ -0.25
CHPF2-201ENST00000035307 PRR16Q569H4 304 aa13.51□□□□□ -0.25
CHPF2-201ENST00000035307 CLEC17AQ6ZS10 378 aa13.51□□□□□ -0.25
CHPF2-201ENST00000035307 CCDC42Q96M95 316 aa13.51□□□□□ -0.25
CHPF2-201ENST00000035307 NBPF3Q9H094 633 aa13.51□□□□□ -0.25
CHPF2-201ENST00000035307 CCDC66A2RUB6 948 aa13.5□□□□□ -0.25
CHPF2-201ENST00000035307 TRAF5O00463 557 aa13.5□□□□□ -0.25
CHPF2-201ENST00000035307 TTLL1O95922 423 aa13.5□□□□□ -0.25
CHPF2-201ENST00000035307 BMS1Q14692 1282 aaKnown RBP13.5□□□□□ -0.25
CHPF2-201ENST00000035307 CCDC122Q5T0U0 273 aa13.5□□□□□ -0.25
CHPF2-201ENST00000035307 USP49Q70CQ1 688 aa13.5□□□□□ -0.25
CHPF2-201ENST00000035307 TAX1BP1Q86VP1 789 aa13.5□□□□□ -0.25
CHPF2-201ENST00000035307 PDLIM2Q96JY6 352 aa13.5□□□□□ -0.25
CHPF2-201ENST00000035307 FAM207AQ9NSI2 230 aaPredicted RBP13.5□□□□□ -0.25
CHPF2-201ENST00000035307 BCCIPQ9P287 314 aaKnown RBP eCLIP13.5□□□□□ -0.25
CHPF2-201ENST00000035307 PLSCR1O15162 318 aa13.5□□□□□ -0.25
CHPF2-201ENST00000035307 USO1O60763 962 aaKnown RBP13.5□□□□□ -0.25
CHPF2-201ENST00000035307 NONOQ15233 471 aaKnown RBP eCLIP13.5□□□□□ -0.255e-7■□□□□ 9.9
CHPF2-201ENST00000035307 NCAPH2Q6IBW4 605 aa13.5□□□□□ -0.25
CHPF2-201ENST00000035307 NELFBQ8WX92 580 aa13.5□□□□□ -0.25
CHPF2-201ENST00000035307 AKT1S1Q96B36 256 aa13.5□□□□□ -0.25
CHPF2-201ENST00000035307 SRRTQ9BXP5 876 aaKnown RBP13.5□□□□□ -0.25
CHPF2-201ENST00000035307 PSTPIP2Q9H939 334 aa13.5□□□□□ -0.25
CHPF2-201ENST00000035307 LUC7LQ9NQ29 371 aaKnown RBP13.5□□□□□ -0.25
CHPF2-201ENST00000035307 KCPQ6ZWJ8 1503 aa13.5□□□□□ -0.25
CHPF2-201ENST00000035307 LMO7Q8WWI1 1683 aa13.5□□□□□ -0.25
CHPF2-201ENST00000035307 SHTN1A0MZ66 631 aa13.5□□□□□ -0.25
CHPF2-201ENST00000035307 DDTLA6NHG4 134 aaPredicted RBP13.5□□□□□ -0.25
CHPF2-201ENST00000035307 H0YHG0 523 aa13.5□□□□□ -0.25
CHPF2-201ENST00000035307 MRPL12P52815 198 aaKnown RBP13.5□□□□□ -0.25
CHPF2-201ENST00000035307 RTKN2Q8IZC4 609 aa13.5□□□□□ -0.25
CHPF2-201ENST00000035307 MLKLQ8NB16 471 aa13.5□□□□□ -0.25
CHPF2-201ENST00000035307 CTAGE15A4D2H0 777 aa13.49□□□□□ -0.25
CHPF2-201ENST00000035307 CTAGE8P0CG41 777 aa13.49□□□□□ -0.25
CHPF2-201ENST00000035307 RASA1P20936 1047 aa13.49□□□□□ -0.25
CHPF2-201ENST00000035307 CTAGE6Q86UF2 777 aa13.49□□□□□ -0.25
CHPF2-201ENST00000035307 CTAGE4Q8IX94 777 aa13.49□□□□□ -0.25
CHPF2-201ENST00000035307 CTAGE1Q96RT6 745 aa13.49□□□□□ -0.25
CHPF2-201ENST00000035307 ZNF341Q9BYN7 854 aa13.49□□□□□ -0.25
CHPF2-201ENST00000035307 NLRC4Q9NPP4 1024 aa13.49□□□□□ -0.25
CHPF2-201ENST00000035307 CTAGE9A4FU28 777 aa13.49□□□□□ -0.25
CHPF2-201ENST00000035307 MMP1P03956 469 aa13.49□□□□□ -0.25
CHPF2-201ENST00000035307 PAK1Q13153 545 aa13.49□□□□□ -0.25
CHPF2-201ENST00000035307 DCAF17Q5H9S7 520 aaPredicted RBP13.49□□□□□ -0.25
CHPF2-201ENST00000035307 TMTC3Q6ZXV5 915 aa13.49□□□□□ -0.25
CHPF2-201ENST00000035307 SYCP3Q8IZU3 236 aa13.49□□□□□ -0.25
CHPF2-201ENST00000035307 TMEM87AQ8NBN3 555 aa13.49□□□□□ -0.25
CHPF2-201ENST00000035307 NOC4LQ9BVI4 516 aaKnown RBP13.49□□□□□ -0.25
CHPF2-201ENST00000035307 POLR3EQ9NVU0 708 aa13.49□□□□□ -0.25
CHPF2-201ENST00000035307 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.49□□□□□ -0.253e-6■■■□□ 17.4
CHPF2-201ENST00000035307 PAFAH1B1P43034 410 aa13.49□□□□□ -0.25
CHPF2-201ENST00000035307 GRIN1Q05586 938 aa13.49□□□□□ -0.25
CHPF2-201ENST00000035307 PPP2R3AQ06190 1150 aa13.49□□□□□ -0.25
CHPF2-201ENST00000035307 SPAG1Q07617 926 aa13.49□□□□□ -0.25
CHPF2-201ENST00000035307 EEPD1Q7L9B9 569 aa13.49□□□□□ -0.25
CHPF2-201ENST00000035307 TMC4Q7Z404 712 aa13.49□□□□□ -0.25
CHPF2-201ENST00000035307 MICALL2Q8IY33 904 aa13.49□□□□□ -0.25
CHPF2-201ENST00000035307 ANKRD13CQ8N6S4 541 aa13.49□□□□□ -0.25
CHPF2-201ENST00000035307 PHRF1Q9P1Y6 1649 aaKnown RBP13.49□□□□□ -0.25
CHPF2-201ENST00000035307 VIRMAQ69YN4 1812 aaKnown RBP13.49□□□□□ -0.25
CHPF2-201ENST00000035307 TRPM3Q9HCF6 1732 aaPredicted RBP13.49□□□□□ -0.25
CHPF2-201ENST00000035307 ALS2Q96Q42 1657 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms