RNA–Protein interactions for RNA: ENST00000639955.1

NECAP1-221, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NECAP1, Length 3,479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-221ENST00000639955 PNMA1Q8ND90 353 aa8.66□□□□□ -1.02
NECAP1-221ENST00000639955 CRACR2AQ9BSW2 395 aa8.66□□□□□ -1.02
NECAP1-221ENST00000639955 RNF26Q9BY78 433 aaPredicted RBP8.66□□□□□ -1.02
NECAP1-221ENST00000639955 AGPAT5Q9NUQ2 364 aa8.66□□□□□ -1.02
NECAP1-221ENST00000639955 ZNF219Q9P2Y4 722 aaPredicted RBP8.66□□□□□ -1.02
NECAP1-221ENST00000639955 RTL9Q8NET4 1388 aa8.66□□□□□ -1.02
NECAP1-221ENST00000639955 UTRNP46939 3433 aa8.66□□□□□ -1.02
NECAP1-221ENST00000639955 GNPATO15228 680 aa8.66□□□□□ -1.02
NECAP1-221ENST00000639955 GNAT2P19087 354 aa8.66□□□□□ -1.02
NECAP1-221ENST00000639955 IL6STP40189 918 aaPredicted RBP8.66□□□□□ -1.02
NECAP1-221ENST00000639955 PDE4DQ08499 809 aa8.66□□□□□ -1.02
NECAP1-221ENST00000639955 CCDC96Q2M329 555 aa8.66□□□□□ -1.02
NECAP1-221ENST00000639955 KANK3Q6NY19 840 aa8.66□□□□□ -1.02
NECAP1-221ENST00000639955 DNAAF5Q86Y56 855 aa8.66□□□□□ -1.02
NECAP1-221ENST00000639955 TMTC2Q8N394 836 aa8.66□□□□□ -1.02
NECAP1-221ENST00000639955 CSGALNACT2Q8N6G5 542 aa8.66□□□□□ -1.02
NECAP1-221ENST00000639955 NOC3LQ8WTT2 800 aaKnown RBP8.66□□□□□ -1.02
NECAP1-221ENST00000639955 FAM84BQ96KN1 310 aaPredicted RBP8.66□□□□□ -1.02
NECAP1-221ENST00000639955 NAPGQ99747 312 aaPredicted RBP8.66□□□□□ -1.02
NECAP1-221ENST00000639955 CRNKL1Q9BZJ0 848 aaKnown RBP8.66□□□□□ -1.02
NECAP1-221ENST00000639955 CENPHQ9H3R5 247 aa8.66□□□□□ -1.02
NECAP1-221ENST00000639955 ADD3Q9UEY8 706 aaKnown RBP8.66□□□□□ -1.02
NECAP1-221ENST00000639955 TAF1P21675 1872 aa8.66□□□□□ -1.02
NECAP1-221ENST00000639955 PPP1R3GB7ZBB8 358 aa8.66□□□□□ -1.02
NECAP1-221ENST00000639955 PLEKP08567 350 aaPredicted RBP8.66□□□□□ -1.02
NECAP1-221ENST00000639955 MAP3K9P80192 1104 aa8.66□□□□□ -1.02
NECAP1-221ENST00000639955 SLC7A5Q01650 507 aa8.66□□□□□ -1.02
NECAP1-221ENST00000639955 TROAPQ12815 778 aa8.66□□□□□ -1.02
NECAP1-221ENST00000639955 GPS2Q13227 327 aa8.66□□□□□ -1.02
NECAP1-221ENST00000639955 GRIK5Q16478 980 aa8.66□□□□□ -1.02
NECAP1-221ENST00000639955 IL17AQ16552 155 aa8.66□□□□□ -1.02
NECAP1-221ENST00000639955 TDRD12Q587J7 1177 aaKnown RBP8.66□□□□□ -1.02
NECAP1-221ENST00000639955 FOXR1Q6PIV2 292 aa8.66□□□□□ -1.02
NECAP1-221ENST00000639955 DTHD1Q6ZMT9 781 aa8.66□□□□□ -1.02
NECAP1-221ENST00000639955 TMC4Q7Z404 712 aa8.66□□□□□ -1.02
NECAP1-221ENST00000639955 ZNF34Q8IZ26 560 aa8.66□□□□□ -1.02
NECAP1-221ENST00000639955 ZNF444Q8N0Y2 327 aaPredicted RBP8.66□□□□□ -1.02
NECAP1-221ENST00000639955 MTRQ99707 1265 aa8.66□□□□□ -1.02
NECAP1-221ENST00000639955 PLA2G12BQ9BX93 195 aa8.66□□□□□ -1.02
NECAP1-221ENST00000639955 NLRC4Q9NPP4 1024 aa8.66□□□□□ -1.02
NECAP1-221ENST00000639955 LUC7L2Q9Y383 392 aaKnown RBP8.66□□□□□ -1.02
NECAP1-221ENST00000639955 CDHR2Q9BYE9 1310 aa8.65□□□□□ -1.02
NECAP1-221ENST00000639955 A0A1B0GTH6 734 aa8.65□□□□□ -1.02
NECAP1-221ENST00000639955 PARP1P09874 1014 aaKnown RBP8.65□□□□□ -1.02
NECAP1-221ENST00000639955 HIBADHP31937 336 aaKnown RBP8.65□□□□□ -1.02
NECAP1-221ENST00000639955 C2orf54Q08AI8 447 aa8.65□□□□□ -1.02
NECAP1-221ENST00000639955 TBC1D8BQ0IIM8 1120 aa8.65□□□□□ -1.02
NECAP1-221ENST00000639955 TMTC3Q6ZXV5 915 aa8.65□□□□□ -1.02
NECAP1-221ENST00000639955 LRRC47Q8N1G4 583 aaKnown RBP8.65□□□□□ -1.02
NECAP1-221ENST00000639955 CCDC155Q8N6L0 562 aa8.65□□□□□ -1.02
NECAP1-221ENST00000639955 PROCA1Q8NCQ7 364 aaPredicted RBP8.65□□□□□ -1.02
NECAP1-221ENST00000639955 ZNF384Q8TF68 577 aa8.65□□□□□ -1.02
NECAP1-221ENST00000639955 KIFC2Q96AC6 838 aa8.65□□□□□ -1.02
NECAP1-221ENST00000639955 ABHD10Q9NUJ1 306 aa8.65□□□□□ -1.02
NECAP1-221ENST00000639955 TMEM260Q9NX78 707 aa8.65□□□□□ -1.02
NECAP1-221ENST00000639955 CALCOCO1Q9P1Z2 691 aa8.65□□□□□ -1.02
NECAP1-221ENST00000639955 MINPP1Q9UNW1 487 aa8.65□□□□□ -1.02
NECAP1-221ENST00000639955 RIMBP2O15034 1052 aa8.65□□□□□ -1.03
NECAP1-221ENST00000639955 BUB1O43683 1085 aa8.65□□□□□ -1.03
NECAP1-221ENST00000639955 ATP1A1P05023 1023 aaKnown RBP8.65□□□□□ -1.03
NECAP1-221ENST00000639955 SEC23AQ15436 765 aa8.65□□□□□ -1.03
NECAP1-221ENST00000639955 ZSCAN26Q16670 478 aa8.65□□□□□ -1.03
NECAP1-221ENST00000639955 TBC1D9BQ66K14 1250 aa8.65□□□□□ -1.03
NECAP1-221ENST00000639955 INTS5Q6P9B9 1019 aaKnown RBP8.65□□□□□ -1.03
NECAP1-221ENST00000639955 SRGAP1Q7Z6B7 1085 aa8.65□□□□□ -1.03
NECAP1-221ENST00000639955 CNGA4Q8IV77 575 aa8.65□□□□□ -1.03
NECAP1-221ENST00000639955 GPR161Q8N6U8 529 aaKnown RBP8.65□□□□□ -1.03
NECAP1-221ENST00000639955 GPCPD1Q9NPB8 672 aa8.65□□□□□ -1.03
NECAP1-221ENST00000639955 DCP1AQ9NPI6 582 aaPredicted RBP8.65□□□□□ -1.03
NECAP1-221ENST00000639955 FBXO3Q9UK99 471 aa8.65□□□□□ -1.03
NECAP1-221ENST00000639955 ZBTB12Q9Y330 459 aaPredicted RBP8.65□□□□□ -1.03
NECAP1-221ENST00000639955 SIPA1L3O60292 1781 aaPredicted RBP8.64□□□□□ -1.03
NECAP1-221ENST00000639955 ABCC6O95255 1503 aa8.64□□□□□ -1.03
NECAP1-221ENST00000639955 MPHOSPH10O00566 681 aaKnown RBP8.64□□□□□ -1.03
NECAP1-221ENST00000639955 TNNI2P48788 182 aa8.64□□□□□ -1.03
NECAP1-221ENST00000639955 NKX1-1Q15270 411 aaPredicted RBP8.64□□□□□ -1.03
NECAP1-221ENST00000639955 NELFCDQ8IXH7 590 aa8.64□□□□□ -1.03
NECAP1-221ENST00000639955 BLIDQ8IZY5 108 aa8.64□□□□□ -1.03
NECAP1-221ENST00000639955 GOLGA6L1Q8N7Z2 621 aa8.64□□□□□ -1.03
NECAP1-221ENST00000639955 SH3RF3Q8TEJ3 882 aaPredicted RBP8.64□□□□□ -1.03
NECAP1-221ENST00000639955 CDK5RAP3Q96JB5 506 aa8.64□□□□□ -1.03
NECAP1-221ENST00000639955 PHF20Q9BVI0 1012 aa8.64□□□□□ -1.03
NECAP1-221ENST00000639955 CDC23Q9UJX2 597 aa8.64□□□□□ -1.03
NECAP1-221ENST00000639955 KCPQ6ZWJ8 1503 aa8.64□□□□□ -1.03
NECAP1-221ENST00000639955 GOLGA6L9A6NEM1 432 aa8.64□□□□□ -1.03
NECAP1-221ENST00000639955 APBA1Q02410 837 aa8.64□□□□□ -1.03
NECAP1-221ENST00000639955 RIOK1Q9BRS2 568 aaKnown RBP8.64□□□□□ -1.03
NECAP1-221ENST00000639955 ADAM21Q9UKJ8 722 aa8.64□□□□□ -1.03
NECAP1-221ENST00000639955 EPN1Q9Y6I3 576 aaPredicted RBP8.64□□□□□ -1.03
NECAP1-221ENST00000639955 CNTNAP5Q8WYK1 1306 aa8.64□□□□□ -1.03
NECAP1-221ENST00000639955 NCK2O43639 380 aa8.64□□□□□ -1.03
NECAP1-221ENST00000639955 CAMTA2O94983 1202 aa8.64□□□□□ -1.03
NECAP1-221ENST00000639955 TBX2Q13207 712 aaPredicted RBP8.64□□□□□ -1.03
NECAP1-221ENST00000639955 TCP11X2Q5H9J9 407 aa8.64□□□□□ -1.03
NECAP1-221ENST00000639955 LEKR1Q6ZMV7 388 aa8.64□□□□□ -1.03
NECAP1-221ENST00000639955 COA7Q96BR5 231 aa8.64□□□□□ -1.03
NECAP1-221ENST00000639955 FAM107BQ9H098 131 aa8.64□□□□□ -1.03
NECAP1-221ENST00000639955 LCMT1Q9UIC8 334 aa8.64□□□□□ -1.03
NECAP1-221ENST00000639955 FAM196BA6NMK8 535 aa8.63□□□□□ -1.03
NECAP1-221ENST00000639955 AKR1B10O60218 316 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms