RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 TMX2Q9Y320 296 aa11.29□□□□□ -0.6
DDX39A-220ENST00000593008 WDR19Q8NEZ3 1342 aa11.29□□□□□ -0.6
DDX39A-220ENST00000593008 PLEKHA8P1O95397 391 aa11.28□□□□□ -0.6
DDX39A-220ENST00000593008 GNRH1P01148 92 aa11.28□□□□□ -0.6
DDX39A-220ENST00000593008 HMGB1P09429 215 aaKnown RBP11.28□□□□□ -0.6
DDX39A-220ENST00000593008 HOXD10P28358 340 aa11.28□□□□□ -0.6
DDX39A-220ENST00000593008 SNAP25P60880 206 aa11.28□□□□□ -0.6
DDX39A-220ENST00000593008 CCT2P78371 535 aaKnown RBP11.28□□□□□ -0.6
DDX39A-220ENST00000593008 ME3Q16798 604 aa11.28□□□□□ -0.6
DDX39A-220ENST00000593008 FAM83BQ5T0W9 1011 aa11.28□□□□□ -0.6
DDX39A-220ENST00000593008 SLFN13Q68D06 897 aa11.28□□□□□ -0.6
DDX39A-220ENST00000593008 APOA5Q6Q788 366 aa11.28□□□□□ -0.6
DDX39A-220ENST00000593008 SAMD1Q6SPF0 538 aaPredicted RBP11.28□□□□□ -0.6
DDX39A-220ENST00000593008 CATSPERGQ6ZRH7 1159 aa11.28□□□□□ -0.6
DDX39A-220ENST00000593008 NBPF11Q86T75 865 aa11.28□□□□□ -0.6
DDX39A-220ENST00000593008 STAG2Q8N3U4 1231 aa11.28□□□□□ -0.6
DDX39A-220ENST00000593008 ANKS1AQ92625 1134 aa11.28□□□□□ -0.6
DDX39A-220ENST00000593008 TANGO6Q9C0B7 1094 aa11.28□□□□□ -0.6
DDX39A-220ENST00000593008 KAT14Q9H8E8 782 aa11.28□□□□□ -0.6
DDX39A-220ENST00000593008 FBXO28Q9NVF7 368 aa11.28□□□□□ -0.6
DDX39A-220ENST00000593008 RBPJLQ9UBG7 517 aa11.28□□□□□ -0.6
DDX39A-220ENST00000593008 ISY1Q9ULR0 285 aaKnown RBP11.28□□□□□ -0.6
DDX39A-220ENST00000593008 ERICH2A1L162 156 aa11.27□□□□□ -0.61
DDX39A-220ENST00000593008 CCDC69A6NI79 296 aa11.27□□□□□ -0.61
DDX39A-220ENST00000593008 F5H6K3 240 aa11.27□□□□□ -0.61
DDX39A-220ENST00000593008 PDHBP11177 359 aa11.27□□□□□ -0.61
DDX39A-220ENST00000593008 PDIA3P30101 505 aaKnown RBP11.27□□□□□ -0.61
DDX39A-220ENST00000593008 CDC27P30260 824 aa11.27□□□□□ -0.61
DDX39A-220ENST00000593008 FLT3LGP49771 235 aa11.27□□□□□ -0.61
DDX39A-220ENST00000593008 KLRC3Q07444 240 aa11.27□□□□□ -0.61
DDX39A-220ENST00000593008 TROAPQ12815 778 aa11.27□□□□□ -0.61
DDX39A-220ENST00000593008 CCDC96Q2M329 555 aa11.27□□□□□ -0.61
DDX39A-220ENST00000593008 Q3C1V9 767 aa11.27□□□□□ -0.61
DDX39A-220ENST00000593008 SGMS1Q86VZ5 419 aa11.27□□□□□ -0.61
DDX39A-220ENST00000593008 DGKHQ86XP1 1220 aa11.27□□□□□ -0.61
DDX39A-220ENST00000593008 GPRC5AQ8NFJ5 357 aa11.27□□□□□ -0.61
DDX39A-220ENST00000593008 MKL1Q969V6 931 aa11.27□□□□□ -0.61
DDX39A-220ENST00000593008 ARMC5Q96C12 935 aa11.27□□□□□ -0.61
DDX39A-220ENST00000593008 VCPKMTQ9H867 229 aa11.27□□□□□ -0.61
DDX39A-220ENST00000593008 GPCPD1Q9NPB8 672 aa11.27□□□□□ -0.61
DDX39A-220ENST00000593008 FAM217BQ9NTX9 383 aaPredicted RBP11.27□□□□□ -0.61
DDX39A-220ENST00000593008 hCG_1642624A0A1W2PR95 340 aa11.26□□□□□ -0.61
DDX39A-220ENST00000593008 POTEFA5A3E0 1075 aa11.26□□□□□ -0.61
DDX39A-220ENST00000593008 GOLGA8AA7E2F4 631 aa11.26□□□□□ -0.61
DDX39A-220ENST00000593008 SNHG28P0DPA3 235 aa11.26□□□□□ -0.61
DDX39A-220ENST00000593008 ELNP15502 786 aa11.26□□□□□ -0.61
DDX39A-220ENST00000593008 SLC16A2P36021 539 aa11.26□□□□□ -0.61
DDX39A-220ENST00000593008 LIFRP42702 1097 aa11.26□□□□□ -0.61
DDX39A-220ENST00000593008 RGS19P49795 217 aa11.26□□□□□ -0.61
DDX39A-220ENST00000593008 PRMT2P55345 433 aa11.26□□□□□ -0.61
DDX39A-220ENST00000593008 ERVK-9P63128 1117 aa11.26□□□□□ -0.61
DDX39A-220ENST00000593008 ERVK-24P63145 666 aa11.26□□□□□ -0.61
DDX39A-220ENST00000593008 SCRN1Q12765 414 aa11.26□□□□□ -0.61
DDX39A-220ENST00000593008 GRM4Q14833 912 aa11.26□□□□□ -0.61
DDX39A-220ENST00000593008 SART3Q15020 963 aaKnown RBP11.26□□□□□ -0.61
DDX39A-220ENST00000593008 GMCL1P1Q8NEA9 526 aa11.26□□□□□ -0.61
DDX39A-220ENST00000593008 PIBF1Q8WXW3 757 aa11.26□□□□□ -0.61
DDX39A-220ENST00000593008 COA7Q96BR5 231 aa11.26□□□□□ -0.61
DDX39A-220ENST00000593008 ZNF333Q96JL9 665 aa11.26□□□□□ -0.61
DDX39A-220ENST00000593008 PORCNQ9H237 461 aa11.26□□□□□ -0.61
DDX39A-220ENST00000593008 SH2D4AQ9H788 454 aa11.26□□□□□ -0.61
DDX39A-220ENST00000593008 MORF4L1Q9UBU8 362 aa11.26□□□□□ -0.61
DDX39A-220ENST00000593008 BIN2Q9UBW5 565 aaPredicted RBP11.26□□□□□ -0.61
DDX39A-220ENST00000593008 MAD2L2Q9UI95 211 aa11.26□□□□□ -0.61
DDX39A-220ENST00000593008 SLC12A7Q9Y666 1083 aa11.26□□□□□ -0.61
DDX39A-220ENST00000593008 BRCA2P51587 3418 aa11.26□□□□□ -0.61
DDX39A-220ENST00000593008 SPDYE16A6NNV3 312 aaPredicted RBP11.25□□□□□ -0.61
DDX39A-220ENST00000593008 ZBTB43O43298 467 aa11.25□□□□□ -0.61
DDX39A-220ENST00000593008 ADCY3O60266 1144 aa11.25□□□□□ -0.61
DDX39A-220ENST00000593008 CNMDO75829 334 aa11.25□□□□□ -0.61
DDX39A-220ENST00000593008 GRK4P32298 578 aa11.25□□□□□ -0.61
DDX39A-220ENST00000593008 ADD1P35611 737 aaKnown RBP11.25□□□□□ -0.61
DDX39A-220ENST00000593008 SLC4A3P48751 1232 aa11.25□□□□□ -0.61
DDX39A-220ENST00000593008 MLLT1Q03111 559 aaPredicted RBP11.25□□□□□ -0.61
DDX39A-220ENST00000593008 ZNF543Q08ER8 600 aa11.25□□□□□ -0.61
DDX39A-220ENST00000593008 WDR78Q5VTH9 848 aa11.25□□□□□ -0.61
DDX39A-220ENST00000593008 CATIPQ7Z7H3 387 aa11.25□□□□□ -0.61
DDX39A-220ENST00000593008 CCDC83Q8IWF9 413 aa11.25□□□□□ -0.61
DDX39A-220ENST00000593008 CCAR1Q8IX12 1150 aaKnown RBP11.25□□□□□ -0.61
DDX39A-220ENST00000593008 UBA5Q9GZZ9 404 aa11.25□□□□□ -0.61
DDX39A-220ENST00000593008 ALDH8A1Q9H2A2 487 aaPredicted RBP11.25□□□□□ -0.61
DDX39A-220ENST00000593008 FOXD4L1Q9NU39 408 aa11.25□□□□□ -0.61
DDX39A-220ENST00000593008 BTBD7Q9P203 1132 aa11.25□□□□□ -0.61
DDX39A-220ENST00000593008 PARP14Q460N5 1801 aa11.24□□□□□ -0.61
DDX39A-220ENST00000593008 ST18O60284 1047 aa11.24□□□□□ -0.61
DDX39A-220ENST00000593008 JAK2O60674 1132 aa11.24□□□□□ -0.61
DDX39A-220ENST00000593008 FLOT1O75955 427 aa11.24□□□□□ -0.61
DDX39A-220ENST00000593008 DDAH1O94760 285 aa11.24□□□□□ -0.61
DDX39A-220ENST00000593008 CTDNEP1O95476 244 aa11.24□□□□□ -0.61
DDX39A-220ENST00000593008 BMP3P12645 472 aa11.24□□□□□ -0.61
DDX39A-220ENST00000593008 EN2P19622 333 aaPredicted RBP11.24□□□□□ -0.61
DDX39A-220ENST00000593008 SLC1A4P43007 532 aa11.24□□□□□ -0.61
DDX39A-220ENST00000593008 METAP2P50579 478 aaKnown RBP eCLIP11.24□□□□□ -0.61
DDX39A-220ENST00000593008 EVCP57679 992 aa11.24□□□□□ -0.61
DDX39A-220ENST00000593008 COG2Q14746 738 aa11.24□□□□□ -0.61
DDX39A-220ENST00000593008 MTFR1Q15390 333 aa11.24□□□□□ -0.61
DDX39A-220ENST00000593008 RTN1Q16799 776 aa11.24□□□□□ -0.61
DDX39A-220ENST00000593008 FBXL16Q8N461 479 aa11.24□□□□□ -0.61
DDX39A-220ENST00000593008 CCDC82Q8N4S0 544 aa11.24□□□□□ -0.61
DDX39A-220ENST00000593008 SRBD1Q8N5C6 995 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms