RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 IFI16Q16666 785 aaKnown RBP8.36□□□□□ -1.07
SMARCE1-219ENST00000583294 FIBCD1Q8N539 461 aa8.36□□□□□ -1.07
SMARCE1-219ENST00000583294 ZNF513Q8N8E2 541 aaPredicted RBP8.36□□□□□ -1.07
SMARCE1-219ENST00000583294 UBE2FQ969M7 185 aa8.36□□□□□ -1.07
SMARCE1-219ENST00000583294 ZDHHC15Q96MV8 337 aa8.36□□□□□ -1.07
SMARCE1-219ENST00000583294 GPR62Q9BZJ7 368 aa8.36□□□□□ -1.07
SMARCE1-219ENST00000583294 EPN3Q9H201 632 aa8.36□□□□□ -1.07
SMARCE1-219ENST00000583294 GPATCH2Q9NW75 528 aa8.36□□□□□ -1.07
SMARCE1-219ENST00000583294 CCDC39Q9UFE4 941 aa8.36□□□□□ -1.07
SMARCE1-219ENST00000583294 AKT3Q9Y243 479 aa8.36□□□□□ -1.07
SMARCE1-219ENST00000583294 FHOD1Q9Y613 1164 aa8.36□□□□□ -1.07
SMARCE1-219ENST00000583294 AGRPO00253 132 aa8.35□□□□□ -1.07
SMARCE1-219ENST00000583294 SMARCA5O60264 1052 aaPredicted RBP8.35□□□□□ -1.07
SMARCE1-219ENST00000583294 ITGAVP06756 1048 aa8.35□□□□□ -1.07
SMARCE1-219ENST00000583294 JAZF1Q86VZ6 243 aa8.35□□□□□ -1.07
SMARCE1-219ENST00000583294 ABI1Q8IZP0 508 aa8.35□□□□□ -1.07
SMARCE1-219ENST00000583294 TRIT1Q9H3H1 467 aaKnown RBP8.35□□□□□ -1.07
SMARCE1-219ENST00000583294 ADGRE2Q9UHX3 823 aa8.35□□□□□ -1.07
SMARCE1-219ENST00000583294 MRPL42Q9Y6G3 142 aaKnown RBP8.35□□□□□ -1.07
SMARCE1-219ENST00000583294 TMEM265A0A087WTH1 108 aa8.34□□□□□ -1.07
SMARCE1-219ENST00000583294 NOP56O00567 594 aaKnown RBP8.34□□□□□ -1.07
SMARCE1-219ENST00000583294 SRFP11831 508 aa8.34□□□□□ -1.07
SMARCE1-219ENST00000583294 TPP2P29144 1249 aaPredicted RBP8.34□□□□□ -1.07
SMARCE1-219ENST00000583294 CLCN7P51798 805 aa8.34□□□□□ -1.07
SMARCE1-219ENST00000583294 LCE3BQ5TA77 95 aa8.34□□□□□ -1.07
SMARCE1-219ENST00000583294 NFXL1Q6ZNB6 911 aa8.34□□□□□ -1.07
SMARCE1-219ENST00000583294 KRTAP19-1Q8IUB9 90 aa8.34□□□□□ -1.07
SMARCE1-219ENST00000583294 BVESQ8NE79 360 aa8.34□□□□□ -1.07
SMARCE1-219ENST00000583294 SYTL5Q8TDW5 730 aaPredicted RBP8.34□□□□□ -1.07
SMARCE1-219ENST00000583294 SPATA9Q9BWV2 254 aa8.34□□□□□ -1.07
SMARCE1-219ENST00000583294 HDAC8Q9BY41 377 aa8.34□□□□□ -1.07
SMARCE1-219ENST00000583294 KANSL2Q9H9L4 492 aa8.34□□□□□ -1.07
SMARCE1-219ENST00000583294 CWC22Q9HCG8 908 aaKnown RBP8.34□□□□□ -1.07
SMARCE1-219ENST00000583294 SEMA3GQ9NS98 782 aa8.34□□□□□ -1.07
SMARCE1-219ENST00000583294 CGGBP1Q9UFW8 167 aaPredicted RBP8.34□□□□□ -1.07
SMARCE1-219ENST00000583294 ANGEL1Q9UNK9 670 aaKnown RBP8.34□□□□□ -1.07
SMARCE1-219ENST00000583294 SHROOM4Q9ULL8 1493 aa8.33□□□□□ -1.08
SMARCE1-219ENST00000583294 A0A087WZG4 1122 aa8.33□□□□□ -1.08
SMARCE1-219ENST00000583294 A0A1W2PQU0 124 aa8.33□□□□□ -1.08
SMARCE1-219ENST00000583294 IQCA1LA6NCM1 817 aa8.33□□□□□ -1.08
SMARCE1-219ENST00000583294 H0Y8X5 98 aa8.33□□□□□ -1.08
SMARCE1-219ENST00000583294 TBX1O43435 398 aa8.33□□□□□ -1.08
SMARCE1-219ENST00000583294 VAMP4O75379 141 aa8.33□□□□□ -1.08
SMARCE1-219ENST00000583294 KCNH1O95259 989 aa8.33□□□□□ -1.08
SMARCE1-219ENST00000583294 TSPYL5Q86VY4 417 aaPredicted RBP8.33□□□□□ -1.08
SMARCE1-219ENST00000583294 ZNF227Q86WZ6 799 aa8.33□□□□□ -1.08
SMARCE1-219ENST00000583294 ARHGEF39Q8N4T4 335 aa8.33□□□□□ -1.08
SMARCE1-219ENST00000583294 ENOX1Q8TC92 643 aaKnown RBP8.33□□□□□ -1.08
SMARCE1-219ENST00000583294 TCTN2Q96GX1 697 aa8.33□□□□□ -1.08
SMARCE1-219ENST00000583294 RNPC3Q96LT9 517 aaKnown RBP8.33□□□□□ -1.08
SMARCE1-219ENST00000583294 DIS3Q9Y2L1 958 aaKnown RBP8.33□□□□□ -1.08
SMARCE1-219ENST00000583294 TLDC2A0PJX2 215 aa8.32□□□□□ -1.08
SMARCE1-219ENST00000583294 PRNPP04156 253 aa8.32□□□□□ -1.08
SMARCE1-219ENST00000583294 CTSKP43235 329 aa8.32□□□□□ -1.08
SMARCE1-219ENST00000583294 BNIP3Q12983 259 aa8.32□□□□□ -1.08
SMARCE1-219ENST00000583294 AOC3Q16853 763 aa8.32□□□□□ -1.08
SMARCE1-219ENST00000583294 DPY19L1Q2PZI1 675 aa8.32□□□□□ -1.08
SMARCE1-219ENST00000583294 CRTC3Q6UUV7 619 aa8.32□□□□□ -1.08
SMARCE1-219ENST00000583294 LRRC47Q8N1G4 583 aaKnown RBP8.32□□□□□ -1.08
SMARCE1-219ENST00000583294 DAGLBQ8NCG7 672 aa8.32□□□□□ -1.08
SMARCE1-219ENST00000583294 SH3TC2Q8TF17 1288 aa8.32□□□□□ -1.08
SMARCE1-219ENST00000583294 ZNF669Q96BR6 464 aaPredicted RBP8.32□□□□□ -1.08
SMARCE1-219ENST00000583294 RCC1LQ96I51 464 aaKnown RBP8.32□□□□□ -1.08
SMARCE1-219ENST00000583294 HRASLS5Q96KN8 279 aa8.32□□□□□ -1.08
SMARCE1-219ENST00000583294 FMNL2Q96PY5 1086 aa8.32□□□□□ -1.08
SMARCE1-219ENST00000583294 GOLGA2P5Q9HBQ8 144 aa8.32□□□□□ -1.08
SMARCE1-219ENST00000583294 ATP13A1Q9HD20 1204 aa8.32□□□□□ -1.08
SMARCE1-219ENST00000583294 PRR13Q9NZ81 148 aa8.32□□□□□ -1.08
SMARCE1-219ENST00000583294 TMA7Q9Y2S6 64 aaKnown RBP8.32□□□□□ -1.08
SMARCE1-219ENST00000583294 SF3B6Q9Y3B4 125 aaKnown RBP8.32□□□□□ -1.08
SMARCE1-219ENST00000583294 EMC9Q9Y3B6 208 aa8.32□□□□□ -1.08
SMARCE1-219ENST00000583294 SNX11Q9Y5W9 270 aa8.32□□□□□ -1.08
SMARCE1-219ENST00000583294 PITPNM2Q9BZ72 1349 aa8.31□□□□□ -1.08
SMARCE1-219ENST00000583294 FAM153BP0C7A2 387 aa8.31□□□□□ -1.08
SMARCE1-219ENST00000583294 CD96P40200 585 aa8.31□□□□□ -1.08
SMARCE1-219ENST00000583294 PPP2R2AP63151 447 aa8.31□□□□□ -1.08
SMARCE1-219ENST00000583294 CWF19L1Q69YN2 538 aaKnown RBP8.31□□□□□ -1.08
SMARCE1-219ENST00000583294 ZNF655Q8N720 491 aaPredicted RBP8.31□□□□□ -1.08
SMARCE1-219ENST00000583294 SGSM3Q96HU1 749 aa8.31□□□□□ -1.08
SMARCE1-219ENST00000583294 BSDC1Q9NW68 430 aaPredicted RBP8.31□□□□□ -1.08
SMARCE1-219ENST00000583294 DUSP13Q9UII6 198 aa8.31□□□□□ -1.08
SMARCE1-219ENST00000583294 TBX22Q9Y458 520 aa8.31□□□□□ -1.08
SMARCE1-219ENST00000583294 GSNP06396 782 aa8.3□□□□□ -1.08
SMARCE1-219ENST00000583294 GRIA2P42262 883 aa8.3□□□□□ -1.08
SMARCE1-219ENST00000583294 POMZP3Q6PJE2 187 aa8.3□□□□□ -1.08
SMARCE1-219ENST00000583294 THAP5Q7Z6K1 395 aa8.3□□□□□ -1.08
SMARCE1-219ENST00000583294 VSIG10LQ86VR7 867 aa8.3□□□□□ -1.08
SMARCE1-219ENST00000583294 CREG2Q8IUH2 290 aa8.3□□□□□ -1.08
SMARCE1-219ENST00000583294 TRIM59Q8IWR1 403 aa8.3□□□□□ -1.08
SMARCE1-219ENST00000583294 TP53INP2Q8IXH6 220 aa8.3□□□□□ -1.08
SMARCE1-219ENST00000583294 BTN2A2Q8WVV5 523 aa8.3□□□□□ -1.08
SMARCE1-219ENST00000583294 MRGPRX3Q96LB0 322 aa8.3□□□□□ -1.08
SMARCE1-219ENST00000583294 GPR55Q9Y2T6 319 aaPredicted RBP8.3□□□□□ -1.08
SMARCE1-219ENST00000583294 RNF114Q9Y508 228 aa8.3□□□□□ -1.08
SMARCE1-219ENST00000583294 SSU72P8A0A1W2PR75 194 aa8.29□□□□□ -1.08
SMARCE1-219ENST00000583294 ADCY3O60266 1144 aa8.29□□□□□ -1.08
SMARCE1-219ENST00000583294 CD3EP07766 207 aa8.29□□□□□ -1.08
SMARCE1-219ENST00000583294 SYPP08247 313 aa8.29□□□□□ -1.08
SMARCE1-219ENST00000583294 LTKP29376 864 aa8.29□□□□□ -1.08
SMARCE1-219ENST00000583294 TXKP42681 527 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms