RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 PRPF3O43395 683 aaKnown RBP17.19■□□□□ 0.34
USP43-202ENST00000570475 SARSP49591 514 aaKnown RBP17.19■□□□□ 0.34
USP43-202ENST00000570475 KLK7P49862 253 aa17.19■□□□□ 0.34
USP43-202ENST00000570475 CASP8Q14790 479 aa17.19■□□□□ 0.34
USP43-202ENST00000570475 TYW1BQ6NUM6 668 aa17.19■□□□□ 0.34
USP43-202ENST00000570475 GTPBP6O43824 516 aaPredicted RBP17.18■□□□□ 0.34
USP43-202ENST00000570475 NDUFA10O95299 355 aa17.18■□□□□ 0.34
USP43-202ENST00000570475 TECP42680 631 aa17.18■□□□□ 0.34
USP43-202ENST00000570475 CACNA2D4Q7Z3S7 1137 aa17.18■□□□□ 0.34
USP43-202ENST00000570475 MAPKAPK5Q8IW41 473 aa17.18■□□□□ 0.34
USP43-202ENST00000570475 PNMA1Q8ND90 353 aa17.18■□□□□ 0.34
USP43-202ENST00000570475 CELF1Q92879 486 aaKnown RBP17.18■□□□□ 0.34
USP43-202ENST00000570475 POLD4Q9HCU8 107 aa17.18■□□□□ 0.34
USP43-202ENST00000570475 SLC39A2Q9NP94 309 aa17.18■□□□□ 0.34
USP43-202ENST00000570475 ZNF652Q9Y2D9 606 aa17.18■□□□□ 0.34
USP43-202ENST00000570475 XDHP47989 1333 aa17.18■□□□□ 0.34
USP43-202ENST00000570475 POTEB2H3BUK9 544 aa17.18■□□□□ 0.34
USP43-202ENST00000570475 ZNF185O15231 689 aa17.18■□□□□ 0.34
USP43-202ENST00000570475 TMTC3Q6ZXV5 915 aa17.18■□□□□ 0.34
USP43-202ENST00000570475 NBPF5PQ86XG9 351 aaPredicted RBP17.18■□□□□ 0.34
USP43-202ENST00000570475 SMCR8Q8TEV9 937 aaPredicted RBP17.18■□□□□ 0.34
USP43-202ENST00000570475 PHF20Q9BVI0 1012 aa17.18■□□□□ 0.34
USP43-202ENST00000570475 C5P01031 1676 aa17.18■□□□□ 0.34
USP43-202ENST00000570475 ADAMTS3O15072 1205 aa17.18■□□□□ 0.34
USP43-202ENST00000570475 KRT86O43790 486 aa17.18■□□□□ 0.34
USP43-202ENST00000570475 DIXDC1Q155Q3 683 aa17.18■□□□□ 0.34
USP43-202ENST00000570475 TBC1D7Q9P0N9 293 aa17.18■□□□□ 0.34
USP43-202ENST00000570475 SAR1BQ9Y6B6 198 aa17.18■□□□□ 0.34
USP43-202ENST00000570475 FGFR2P21802 821 aa17.17■□□□□ 0.34
USP43-202ENST00000570475 MECOMQ03112 1051 aa17.17■□□□□ 0.34
USP43-202ENST00000570475 KIF5AQ12840 1032 aa17.17■□□□□ 0.34
USP43-202ENST00000570475 KRT26Q7Z3Y9 468 aa17.17■□□□□ 0.34
USP43-202ENST00000570475 TICAM2Q86XR7 235 aa17.17■□□□□ 0.34
USP43-202ENST00000570475 TGFBRAP1Q8WUH2 860 aa17.17■□□□□ 0.34
USP43-202ENST00000570475 KCND1Q9NSA2 647 aa17.17■□□□□ 0.34
USP43-202ENST00000570475 LOC102724428A0A0B4J2F2 783 aa17.17■□□□□ 0.34
USP43-202ENST00000570475 HIBADHP31937 336 aaKnown RBP17.17■□□□□ 0.34
USP43-202ENST00000570475 CYLC1P35663 651 aaPredicted RBP17.17■□□□□ 0.34
USP43-202ENST00000570475 SIK1P57059 783 aa17.17■□□□□ 0.34
USP43-202ENST00000570475 FAM204AQ9H8W3 233 aa17.17■□□□□ 0.34
USP43-202ENST00000570475 AGPAT5Q9NUQ2 364 aa17.17■□□□□ 0.34
USP43-202ENST00000570475 DUSP10Q9Y6W6 482 aa17.17■□□□□ 0.34
USP43-202ENST00000570475 RASGRP2Q7LDG7 609 aa17.17■□□□□ 0.34
USP43-202ENST00000570475 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.17■□□□□ 0.34
USP43-202ENST00000570475 UBA5Q9GZZ9 404 aa17.17■□□□□ 0.34
USP43-202ENST00000570475 F8W031 263 aaPredicted RBP17.16■□□□□ 0.34
USP43-202ENST00000570475 ATP1A1P05023 1023 aaKnown RBP17.16■□□□□ 0.34
USP43-202ENST00000570475 C2CD5Q86YS7 1000 aa17.16■□□□□ 0.34
USP43-202ENST00000570475 CALML3P27482 149 aa17.16■□□□□ 0.34
USP43-202ENST00000570475 C2orf54Q08AI8 447 aa17.16■□□□□ 0.34
USP43-202ENST00000570475 NKX1-1Q15270 411 aaPredicted RBP17.16■□□□□ 0.34
USP43-202ENST00000570475 RSRC2Q7L4I2 434 aaKnown RBP17.16■□□□□ 0.34
USP43-202ENST00000570475 TUBGCP2Q9BSJ2 902 aa17.16■□□□□ 0.34
USP43-202ENST00000570475 ANKZF1Q9H8Y5 726 aa17.16■□□□□ 0.34
USP43-202ENST00000570475 NLRC4Q9NPP4 1024 aa17.16■□□□□ 0.34
USP43-202ENST00000570475 BIN2Q9UBW5 565 aaPredicted RBP17.16■□□□□ 0.34
USP43-202ENST00000570475 MRC1P22897 1456 aa17.16■□□□□ 0.34
USP43-202ENST00000570475 SLC7A5Q01650 507 aa17.16■□□□□ 0.34
USP43-202ENST00000570475 TROAPQ12815 778 aa17.16■□□□□ 0.34
USP43-202ENST00000570475 CRYBG1Q9Y4K1 1723 aa17.16■□□□□ 0.34
USP43-202ENST00000570475 FAM182BQ5T319 152 aa17.15■□□□□ 0.34
USP43-202ENST00000570475 ZNF658Q5TYW1 1059 aaPredicted RBP17.15■□□□□ 0.34
USP43-202ENST00000570475 C3orf67Q6ZVT6 689 aa17.15■□□□□ 0.34
USP43-202ENST00000570475 FAM107BQ9H098 131 aa17.15■□□□□ 0.34
USP43-202ENST00000570475 ZNF335Q9H4Z2 1342 aaPredicted RBP17.15■□□□□ 0.34
USP43-202ENST00000570475 PMS1P54277 932 aaKnown RBP17.15■□□□□ 0.34
USP43-202ENST00000570475 SEC23AQ15436 765 aa17.15■□□□□ 0.34
USP43-202ENST00000570475 ZNF34Q8IZ26 560 aa17.15■□□□□ 0.34
USP43-202ENST00000570475 NOC3LQ8WTT2 800 aaKnown RBP17.15■□□□□ 0.34
USP43-202ENST00000570475 SHISA4Q96DD7 197 aa17.15■□□□□ 0.34
USP43-202ENST00000570475 MMS19Q96T76 1030 aa17.15■□□□□ 0.34
USP43-202ENST00000570475 TMEM60Q9H2L4 133 aa17.15■□□□□ 0.34
USP43-202ENST00000570475 SMARCAL1Q9NZC9 954 aa17.15■□□□□ 0.34
USP43-202ENST00000570475 SEC63Q9UGP8 760 aaKnown RBP17.15■□□□□ 0.34
USP43-202ENST00000570475 KCNQ2O43526 872 aa17.14■□□□□ 0.34
USP43-202ENST00000570475 EPS15P42566 896 aa17.14■□□□□ 0.34
USP43-202ENST00000570475 LRRC41Q15345 812 aa17.14■□□□□ 0.34
USP43-202ENST00000570475 DHX37Q8IY37 1157 aaKnown RBP17.14■□□□□ 0.34
USP43-202ENST00000570475 NLRP3Q96P20 1036 aa17.14■□□□□ 0.34
USP43-202ENST00000570475 RWDD2AQ9UIY3 292 aa17.14■□□□□ 0.34
USP43-202ENST00000570475 MST1RQ04912 1400 aa17.14■□□□□ 0.33
USP43-202ENST00000570475 KRT83P78385 493 aa17.14■□□□□ 0.33
USP43-202ENST00000570475 CABP7Q86V35 215 aa17.14■□□□□ 0.33
USP43-202ENST00000570475 BUB1O43683 1085 aa17.14■□□□□ 0.33
USP43-202ENST00000570475 KRT18P05783 430 aaKnown RBP17.14■□□□□ 0.33
USP43-202ENST00000570475 IBSPP21815 317 aaPredicted RBP17.14■□□□□ 0.33
USP43-202ENST00000570475 ATP2C1P98194 919 aaPredicted RBP17.14■□□□□ 0.33
USP43-202ENST00000570475 PICALMQ13492 652 aa17.14■□□□□ 0.33
USP43-202ENST00000570475 KCTD19Q17RG1 926 aaPredicted RBP17.14■□□□□ 0.33
USP43-202ENST00000570475 SND1Q7KZF4 910 aaKnown RBP eCLIP17.14■□□□□ 0.33
USP43-202ENST00000570475 IFT81Q8WYA0 676 aa17.14■□□□□ 0.33
USP43-202ENST00000570475 ZNF512BQ96KM6 892 aaPredicted RBP17.14■□□□□ 0.33
USP43-202ENST00000570475 KANSL2Q9H9L4 492 aa17.14■□□□□ 0.33
USP43-202ENST00000570475 KIF13AQ9H1H9 1805 aa17.14■□□□□ 0.33
USP43-202ENST00000570475 FCER1AP12319 257 aa17.13■□□□□ 0.33
USP43-202ENST00000570475 WHAMMP3Q1A5X7 153 aa17.13■□□□□ 0.33
USP43-202ENST00000570475 MAP9Q49MG5 647 aa17.13■□□□□ 0.33
USP43-202ENST00000570475 PARP10Q53GL7 1025 aa17.13■□□□□ 0.33
USP43-202ENST00000570475 FAM84BQ96KN1 310 aaPredicted RBP17.13■□□□□ 0.33
USP43-202ENST00000570475 DCP1AQ9NPI6 582 aaPredicted RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms