RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 CDADC1Q9BWV3 514 aa5.44□□□□□ -1.54
SPG11-206ENST00000558093 GP6Q9HCN6 339 aa5.44□□□□□ -1.54
SPG11-206ENST00000558093 CARMIL2Q6F5E8 1435 aa5.43□□□□□ -1.54
SPG11-206ENST00000558093 USP2O75604 605 aaPredicted RBP5.43□□□□□ -1.54
SPG11-206ENST00000558093 HPXP02790 462 aa5.43□□□□□ -1.54
SPG11-206ENST00000558093 CD247P20963 164 aa5.43□□□□□ -1.54
SPG11-206ENST00000558093 BMP8BP34820 402 aa5.43□□□□□ -1.54
SPG11-206ENST00000558093 TRHRP34981 398 aaPredicted RBP5.43□□□□□ -1.54
SPG11-206ENST00000558093 SLC14A2Q15849 920 aa5.43□□□□□ -1.54
SPG11-206ENST00000558093 ADAT2Q7Z6V5 191 aaKnown RBP5.43□□□□□ -1.54
SPG11-206ENST00000558093 SPPL2CQ8IUH8 684 aa5.43□□□□□ -1.54
SPG11-206ENST00000558093 LILRA2Q8N149 483 aa5.43□□□□□ -1.54
SPG11-206ENST00000558093 FIBCD1Q8N539 461 aa5.43□□□□□ -1.54
SPG11-206ENST00000558093 NAT16Q8N8M0 369 aa5.43□□□□□ -1.54
SPG11-206ENST00000558093 ADCY4Q8NFM4 1077 aa5.43□□□□□ -1.54
SPG11-206ENST00000558093 ZDHHC15Q96MV8 337 aa5.43□□□□□ -1.54
SPG11-206ENST00000558093 NOL6Q9H6R4 1146 aaKnown RBP5.43□□□□□ -1.54
SPG11-206ENST00000558093 ACTR10Q9NZ32 417 aa5.43□□□□□ -1.54
SPG11-206ENST00000558093 GPR160Q9UJ42 338 aa5.43□□□□□ -1.54
SPG11-206ENST00000558093 SUGT1Q9Y2Z0 365 aa5.43□□□□□ -1.54
SPG11-206ENST00000558093 SF3B6Q9Y3B4 125 aaKnown RBP5.43□□□□□ -1.54
SPG11-206ENST00000558093 R3HCC1Q9Y3T6 440 aaKnown RBP5.43□□□□□ -1.54
SPG11-206ENST00000558093 ZNF451Q9Y4E5 1061 aa5.43□□□□□ -1.54
SPG11-206ENST00000558093 FHOD1Q9Y613 1164 aa5.43□□□□□ -1.54
SPG11-206ENST00000558093 LRRC10BA6NIK2 292 aa5.42□□□□□ -1.54
SPG11-206ENST00000558093 H0Y8X5 98 aa5.42□□□□□ -1.54
SPG11-206ENST00000558093 SMAD7O15105 426 aaKnown RBP5.42□□□□□ -1.54
SPG11-206ENST00000558093 EPHX1P07099 455 aa5.42□□□□□ -1.54
SPG11-206ENST00000558093 NAT2P11245 290 aa5.42□□□□□ -1.54
SPG11-206ENST00000558093 CTSKP43235 329 aa5.42□□□□□ -1.54
SPG11-206ENST00000558093 CASP7P55210 303 aa5.42□□□□□ -1.54
SPG11-206ENST00000558093 ZNF445P59923 1031 aa5.42□□□□□ -1.54
SPG11-206ENST00000558093 PPP2R5DQ14738 602 aa5.42□□□□□ -1.54
SPG11-206ENST00000558093 MLANAQ16655 118 aa5.42□□□□□ -1.54
SPG11-206ENST00000558093 ANKRD39Q53RE8 183 aa5.42□□□□□ -1.54
SPG11-206ENST00000558093 LARP1BQ659C4 914 aaKnown RBP5.42□□□□□ -1.54
SPG11-206ENST00000558093 KIAA1211LQ6NV74 962 aa5.42□□□□□ -1.54
SPG11-206ENST00000558093 ZPBP2Q6X784 338 aa5.42□□□□□ -1.54
SPG11-206ENST00000558093 CEP128Q6ZU80 1094 aa5.42□□□□□ -1.54
SPG11-206ENST00000558093 LIN37Q96GY3 246 aaPredicted RBP5.42□□□□□ -1.54
SPG11-206ENST00000558093 MAP6Q96JE9 813 aa5.42□□□□□ -1.54
SPG11-206ENST00000558093 FCRL2Q96LA5 508 aaPredicted RBP5.42□□□□□ -1.54
SPG11-206ENST00000558093 C19orf44Q9H6X5 657 aa5.42□□□□□ -1.54
SPG11-206ENST00000558093 FAM53CQ9NYF3 392 aa5.42□□□□□ -1.54
SPG11-206ENST00000558093 WHRNQ9P202 907 aa5.42□□□□□ -1.54
SPG11-206ENST00000558093 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.42□□□□□ -1.54
SPG11-206ENST00000558093 CBFA2T2O43439 604 aa5.41□□□□□ -1.54
SPG11-206ENST00000558093 PPM1BO75688 479 aa5.41□□□□□ -1.54
SPG11-206ENST00000558093 ZNF205O95201 554 aa5.41□□□□□ -1.54
SPG11-206ENST00000558093 CD3EP07766 207 aa5.41□□□□□ -1.54
SPG11-206ENST00000558093 GSTM1P09488 218 aa5.41□□□□□ -1.54
SPG11-206ENST00000558093 FGRP09769 529 aa5.41□□□□□ -1.54
SPG11-206ENST00000558093 ZC3H6P61129 1189 aaKnown RBP5.41□□□□□ -1.54
SPG11-206ENST00000558093 OGFOD2Q6N063 350 aa5.41□□□□□ -1.54
SPG11-206ENST00000558093 PPP1R14AQ96A00 147 aa5.41□□□□□ -1.54
SPG11-206ENST00000558093 FGD4Q96M96 766 aa5.41□□□□□ -1.54
SPG11-206ENST00000558093 FMNL2Q96PY5 1086 aa5.41□□□□□ -1.54
SPG11-206ENST00000558093 RNF32Q9H0A6 362 aa5.41□□□□□ -1.54
SPG11-206ENST00000558093 AP5S1Q9NUS5 200 aa5.41□□□□□ -1.54
SPG11-206ENST00000558093 TMEM82A0PJX8 343 aa5.4□□□□□ -1.54
SPG11-206ENST00000558093 ZNF503-AS2A6NEH8 195 aa5.4□□□□□ -1.54
SPG11-206ENST00000558093 VAV1P15498 845 aa5.4□□□□□ -1.54
SPG11-206ENST00000558093 KIR2DL1P43626 348 aaPredicted RBP5.4□□□□□ -1.54
SPG11-206ENST00000558093 KIR2DL2P43627 348 aaPredicted RBP5.4□□□□□ -1.54
SPG11-206ENST00000558093 NOP2P46087 812 aaKnown RBP5.4□□□□□ -1.54
SPG11-206ENST00000558093 POU4F1Q01851 419 aa5.4□□□□□ -1.54
SPG11-206ENST00000558093 NCAPHQ15003 741 aa5.4□□□□□ -1.54
SPG11-206ENST00000558093 KLHL6Q8WZ60 621 aa5.4□□□□□ -1.54
SPG11-206ENST00000558093 DIRC2Q96SL1 478 aa5.4□□□□□ -1.54
SPG11-206ENST00000558093 KLHL25Q9H0H3 589 aa5.4□□□□□ -1.54
SPG11-206ENST00000558093 ZNF408Q9H9D4 720 aa5.4□□□□□ -1.54
SPG11-206ENST00000558093 IGSF5Q9NSI5 407 aa5.4□□□□□ -1.54
SPG11-206ENST00000558093 PRKAG3Q9UGI9 489 aa5.4□□□□□ -1.54
SPG11-206ENST00000558093 GPR55Q9Y2T6 319 aaPredicted RBP5.4□□□□□ -1.54
SPG11-206ENST00000558093 TAF6LQ9Y6J9 622 aa5.4□□□□□ -1.54
SPG11-206ENST00000558093 ANKRD34BA5PLL1 514 aa5.39□□□□□ -1.55
SPG11-206ENST00000558093 NR0B2Q15466 257 aa5.39□□□□□ -1.55
SPG11-206ENST00000558093 TIGD5Q53EQ6 642 aa5.39□□□□□ -1.55
SPG11-206ENST00000558093 MCF2L2Q86YR7 1114 aa5.39□□□□□ -1.55
SPG11-206ENST00000558093 CRACR2BQ8N4Y2 399 aaPredicted RBP5.39□□□□□ -1.55
SPG11-206ENST00000558093 SLC43A3Q8NBI5 491 aa5.39□□□□□ -1.55
SPG11-206ENST00000558093 LINC01599Q8WXQ3 324 aa5.39□□□□□ -1.55
SPG11-206ENST00000558093 HHIPL1Q96JK4 782 aa5.39□□□□□ -1.55
SPG11-206ENST00000558093 G6PC3Q9BUM1 346 aa5.39□□□□□ -1.55
SPG11-206ENST00000558093 SLC6A17Q9H1V8 727 aa5.39□□□□□ -1.55
SPG11-206ENST00000558093 NSUN3Q9H649 340 aaKnown RBP5.39□□□□□ -1.55
SPG11-206ENST00000558093 CWC22Q9HCG8 908 aaKnown RBP5.39□□□□□ -1.55
SPG11-206ENST00000558093 ERVK13-1Q9NX77 482 aa5.39□□□□□ -1.55
SPG11-206ENST00000558093 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.39□□□□□ -1.55
SPG11-206ENST00000558093 TNFRSF10DQ9UBN6 386 aa5.39□□□□□ -1.55
SPG11-206ENST00000558093 EBF1Q9UH73 591 aa5.39□□□□□ -1.55
SPG11-206ENST00000558093 DIS3Q9Y2L1 958 aaKnown RBP5.39□□□□□ -1.55
SPG11-206ENST00000558093 A0A087WZG4 1122 aa5.38□□□□□ -1.55
SPG11-206ENST00000558093 A0A1W2PQ27 194 aa5.38□□□□□ -1.55
SPG11-206ENST00000558093 A0A1W2PQ64 194 aa5.38□□□□□ -1.55
SPG11-206ENST00000558093 A0A1W2PQC6 194 aa5.38□□□□□ -1.55
SPG11-206ENST00000558093 A0A1W2PQD8 194 aa5.38□□□□□ -1.55
SPG11-206ENST00000558093 PSPNO60542 156 aa5.38□□□□□ -1.55
SPG11-206ENST00000558093 DDAH1O94760 285 aa5.38□□□□□ -1.55
SPG11-206ENST00000558093 FARP2O94887 1054 aaPredicted RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms