RNA–Protein interactions for RNA: ENST00000550160.5

CNOT2-223, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 5

Gene CNOT2, Length 993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-223	ENST00000550160	SPDYE1	Q8NFV5	336 aa	Predicted RBP	13.44	□□□□□ -0.26
CNOT2-223	ENST00000550160	C8orf76	Q96K31	380 aa		13.44	□□□□□ -0.26
CNOT2-223	ENST00000550160	ALG1	Q9BT22	464 aa		13.44	□□□□□ -0.26
CNOT2-223	ENST00000550160	TANGO6	Q9C0B7	1094 aa		13.44	□□□□□ -0.26
CNOT2-223	ENST00000550160	UBA5	Q9GZZ9	404 aa		13.44	□□□□□ -0.26
CNOT2-223	ENST00000550160	OTOF	Q9HC10	1997 aa		13.43	□□□□□ -0.26
CNOT2-223	ENST00000550160	PASK	Q96RG2	1323 aa		13.43	□□□□□ -0.26
CNOT2-223	ENST00000550160	WDR33	Q9C0J8	1336 aa	Known RBP	13.43	□□□□□ -0.26
CNOT2-223	ENST00000550160	hCG_1984214	I3L0E3	225 aa		13.43	□□□□□ -0.26
CNOT2-223	ENST00000550160	IRF6	O14896	467 aa		13.43	□□□□□ -0.26
CNOT2-223	ENST00000550160	STX6	O43752	255 aa		13.43	□□□□□ -0.26
CNOT2-223	ENST00000550160	PLA2G6	O60733	806 aa		13.43	□□□□□ -0.26
CNOT2-223	ENST00000550160	SCG2	P13521	617 aa		13.43	□□□□□ -0.26
CNOT2-223	ENST00000550160	VCAM1	P19320	739 aa		13.43	□□□□□ -0.26
CNOT2-223	ENST00000550160	HUNK	P57058	714 aa		13.43	□□□□□ -0.26
CNOT2-223	ENST00000550160	TRAF1	Q13077	416 aa		13.43	□□□□□ -0.26
CNOT2-223	ENST00000550160	SNAPC2	Q13487	334 aa		13.43	□□□□□ -0.26
CNOT2-223	ENST00000550160	SYDE2	Q5VT97	1194 aa		13.43	□□□□□ -0.26
CNOT2-223	ENST00000550160	BTNL9	Q6UXG8	535 aa		13.43	□□□□□ -0.26
CNOT2-223	ENST00000550160	FAM177A1	Q8N128	213 aa	Predicted RBP	13.43	□□□□□ -0.26
CNOT2-223	ENST00000550160	ZNF713	Q8N859	430 aa	Predicted RBP	13.43	□□□□□ -0.26
CNOT2-223	ENST00000550160	ZNF784	Q8NCA9	323 aa	Predicted RBP	13.43	□□□□□ -0.26
CNOT2-223	ENST00000550160	NUP88	Q99567	741 aa	Predicted RBP	13.43	□□□□□ -0.26
CNOT2-223	ENST00000550160	RIOX1	Q9H6W3	641 aa		13.43	□□□□□ -0.26
CNOT2-223	ENST00000550160	EMILIN3	Q9NT22	766 aa		13.43	□□□□□ -0.26
CNOT2-223	ENST00000550160	KCNH4	Q9UQ05	1017 aa		13.43	□□□□□ -0.26
CNOT2-223	ENST00000550160	VPS37C	A5D8V6	355 aa	Predicted RBP	13.42	□□□□□ -0.26
CNOT2-223	ENST00000550160	FDPS	P14324	419 aa	Known RBP	13.42	□□□□□ -0.26
CNOT2-223	ENST00000550160	SYT1	P21579	422 aa		13.42	□□□□□ -0.26
CNOT2-223	ENST00000550160	DDIT3	P35638	169 aa		13.42	□□□□□ -0.26
CNOT2-223	ENST00000550160	SLC16A2	P36021	539 aa		13.42	□□□□□ -0.26
CNOT2-223	ENST00000550160	PFKFB3	Q16875	520 aa	Predicted RBP	13.42	□□□□□ -0.26
CNOT2-223	ENST00000550160	CST9	Q5W186	159 aa		13.42	□□□□□ -0.26
CNOT2-223	ENST00000550160	TTBK2	Q6IQ55	1244 aa		13.42	□□□□□ -0.26
CNOT2-223	ENST00000550160	FASTKD5	Q7L8L6	764 aa	Known RBP	13.42	□□□□□ -0.26
CNOT2-223	ENST00000550160	HOMER1	Q86YM7	354 aa		13.42	□□□□□ -0.26
CNOT2-223	ENST00000550160	ADGRF4	Q8IZF3	695 aa		13.42	□□□□□ -0.26
CNOT2-223	ENST00000550160	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.42	□□□□□ -0.26
CNOT2-223	ENST00000550160	CCDC148	Q8NFR7	591 aa		13.42	□□□□□ -0.26
CNOT2-223	ENST00000550160	CCDC12	Q8WUD4	166 aa	Predicted RBP	13.42	□□□□□ -0.26
CNOT2-223	ENST00000550160	PIBF1	Q8WXW3	757 aa		13.42	□□□□□ -0.26
CNOT2-223	ENST00000550160	RPAP3	Q9H6T3	665 aa	Predicted RBP	13.42	□□□□□ -0.26
CNOT2-223	ENST00000550160	VAT1L	Q9HCJ6	419 aa		13.42	□□□□□ -0.26
CNOT2-223	ENST00000550160	CTDP1	Q9Y5B0	961 aa	Predicted RBP	13.42	□□□□□ -0.26
CNOT2-223	ENST00000550160		A0A0G2JLL6	359 aa	Predicted RBP	13.41	□□□□□ -0.26
CNOT2-223	ENST00000550160	PNMA6F	A0A0J9YX94	578 aa		13.41	□□□□□ -0.26
CNOT2-223	ENST00000550160	CYTH3	O43739	400 aa		13.41	□□□□□ -0.26
CNOT2-223	ENST00000550160	FLOT1	O75955	427 aa		13.41	□□□□□ -0.26
CNOT2-223	ENST00000550160	ZBTB48	P10074	688 aa	Predicted RBP	13.41	□□□□□ -0.26
CNOT2-223	ENST00000550160	FDX1	P10109	184 aa		13.41	□□□□□ -0.26
CNOT2-223	ENST00000550160	PABPC4	Q13310	644 aa	Known RBP eCLIP	13.41	□□□□□ -0.26
CNOT2-223	ENST00000550160	SAFB	Q15424	915 aa	Known RBP eCLIP	13.41	□□□□□ -0.26
CNOT2-223	ENST00000550160	KIAA1755	Q5JYT7	1200 aa		13.41	□□□□□ -0.26
CNOT2-223	ENST00000550160	GADL1	Q6ZQY3	521 aa		13.41	□□□□□ -0.26
CNOT2-223	ENST00000550160	PRRT2	Q7Z6L0	340 aa	Predicted RBP	13.41	□□□□□ -0.26
CNOT2-223	ENST00000550160	PRPF38A	Q8NAV1	312 aa	Known RBP	13.41	□□□□□ -0.26
CNOT2-223	ENST00000550160	KIFC2	Q96AC6	838 aa		13.41	□□□□□ -0.26
CNOT2-223	ENST00000550160	PIGS	Q96S52	555 aa		13.41	□□□□□ -0.26
CNOT2-223	ENST00000550160	SLF1	Q9BQI6	1058 aa		13.41	□□□□□ -0.26
CNOT2-223	ENST00000550160	BRMS1	Q9HCU9	246 aa		13.41	□□□□□ -0.26
CNOT2-223	ENST00000550160	SH3GLB2	Q9NR46	395 aa		13.41	□□□□□ -0.26
CNOT2-223	ENST00000550160	PNMA2	Q9UL42	364 aa		13.41	□□□□□ -0.26
CNOT2-223	ENST00000550160	TRPM7	Q96QT4	1865 aa		13.41	□□□□□ -0.26
CNOT2-223	ENST00000550160	TMEM88B	A6NKF7	163 aa		13.4	□□□□□ -0.26
CNOT2-223	ENST00000550160	USP17L15	C9J2P7	530 aa		13.4	□□□□□ -0.26
CNOT2-223	ENST00000550160	USP17L13	C9JLJ4	530 aa		13.4	□□□□□ -0.26
CNOT2-223	ENST00000550160	USP17L11	C9JVI0	530 aa		13.4	□□□□□ -0.26
CNOT2-223	ENST00000550160	USP17L18	D6R9N7	530 aa		13.4	□□□□□ -0.26
CNOT2-223	ENST00000550160	USP17L22	D6RA61	530 aa		13.4	□□□□□ -0.26
CNOT2-223	ENST00000550160	USP17L17	D6RBQ6	530 aa		13.4	□□□□□ -0.26
CNOT2-223	ENST00000550160	USP17L19	D6RCP7	530 aa		13.4	□□□□□ -0.26
CNOT2-223	ENST00000550160	USP17L20	D6RJB6	530 aa		13.4	□□□□□ -0.26
CNOT2-223	ENST00000550160	ZBTB5	O15062	677 aa		13.4	□□□□□ -0.26
CNOT2-223	ENST00000550160	DTNB	O60941	627 aa		13.4	□□□□□ -0.26
CNOT2-223	ENST00000550160	CETP	P11597	493 aa		13.4	□□□□□ -0.26
CNOT2-223	ENST00000550160	GTF2A2	P52657	109 aa		13.4	□□□□□ -0.26
CNOT2-223	ENST00000550160	USP17L24	Q0WX57	530 aa		13.4	□□□□□ -0.26
CNOT2-223	ENST00000550160	CDC37	Q16543	378 aa	Predicted RBP	13.4	□□□□□ -0.26
CNOT2-223	ENST00000550160	HEATR3	Q7Z4Q2	680 aa		13.4	□□□□□ -0.26
CNOT2-223	ENST00000550160	WNK4	Q96J92	1243 aa		13.4	□□□□□ -0.26
CNOT2-223	ENST00000550160	CPVL	Q9H3G5	476 aa		13.4	□□□□□ -0.26
CNOT2-223	ENST00000550160	JMJD4	Q9H9V9	463 aa		13.4	□□□□□ -0.26
CNOT2-223	ENST00000550160	PRR12	Q9ULL5	1215 aa		13.4	□□□□□ -0.26
CNOT2-223	ENST00000550160	ABT1	Q9ULW3	272 aa	Known RBP	13.4	□□□□□ -0.26
CNOT2-223	ENST00000550160	ATP6V1D	Q9Y5K8	247 aa		13.4	□□□□□ -0.26
CNOT2-223	ENST00000550160	UTRN	P46939	3433 aa		13.39	□□□□□ -0.27
CNOT2-223	ENST00000550160	hCG_1642624	A0A1W2PR95	340 aa		13.39	□□□□□ -0.27
CNOT2-223	ENST00000550160	ZSCAN22	P10073	491 aa	Predicted RBP	13.39	□□□□□ -0.27
CNOT2-223	ENST00000550160	CALML3	P27482	149 aa		13.39	□□□□□ -0.27
CNOT2-223	ENST00000550160	ZNF157	P51786	506 aa	Predicted RBP	13.39	□□□□□ -0.27
CNOT2-223	ENST00000550160	FOSB	P53539	338 aa		13.39	□□□□□ -0.27
CNOT2-223	ENST00000550160	NLRP5	P59047	1200 aa		13.39	□□□□□ -0.27
CNOT2-223	ENST00000550160	IRX3	P78415	501 aa	Predicted RBP	13.39	□□□□□ -0.27
CNOT2-223	ENST00000550160	GNL2	Q13823	731 aa	Known RBP	13.39	□□□□□ -0.27
CNOT2-223	ENST00000550160	PKN1	Q16512	942 aa		13.39	□□□□□ -0.27
CNOT2-223	ENST00000550160	RGMB	Q6NW40	437 aa		13.39	□□□□□ -0.27
CNOT2-223	ENST00000550160	SAPCD2	Q86UD0	394 aa		13.39	□□□□□ -0.27
CNOT2-223	ENST00000550160	FBXO18	Q8NFZ0	1043 aa		13.39	□□□□□ -0.27
CNOT2-223	ENST00000550160	MTMR8	Q96EF0	704 aa		13.39	□□□□□ -0.27
CNOT2-223	ENST00000550160	AMN	Q9BXJ7	453 aa		13.39	□□□□□ -0.27

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