RNA–Protein interactions for RNA: ENST00000545549.1

LINC01965-204, Transcript of long intergenic non-protein coding RNA 1965, humanhuman

TSL 4 BASIC

Gene LINC01965, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01965-204ENST00000545549 USP17L1Q7RTZ2 530 aa4.28□□□□□ -1.72
LINC01965-204ENST00000545549 NIM1KQ8IY84 436 aa4.28□□□□□ -1.72
LINC01965-204ENST00000545549 KLHDC4Q8TBB5 520 aa4.28□□□□□ -1.72
LINC01965-204ENST00000545549 DCPSQ96C86 337 aaKnown RBP4.28□□□□□ -1.72
LINC01965-204ENST00000545549 CDCA5Q96FF9 252 aa4.28□□□□□ -1.72
LINC01965-204ENST00000545549 PAWRQ96IZ0 340 aaKnown RBP4.28□□□□□ -1.72
LINC01965-204ENST00000545549 CCDC85AQ96PX6 553 aaPredicted RBP4.28□□□□□ -1.72
LINC01965-204ENST00000545549 EYA3Q99504 573 aa4.28□□□□□ -1.72
LINC01965-204ENST00000545549 ZC3H12CQ9C0D7 883 aaKnown RBP4.28□□□□□ -1.72
LINC01965-204ENST00000545549 GZF1Q9H116 711 aaPredicted RBP4.28□□□□□ -1.72
LINC01965-204ENST00000545549 ANTXR1Q9H6X2 564 aa4.28□□□□□ -1.72
LINC01965-204ENST00000545549 DBNDD1Q9H9R9 158 aa4.28□□□□□ -1.72
LINC01965-204ENST00000545549 GPR108Q9NPR9 543 aa4.28□□□□□ -1.72
LINC01965-204ENST00000545549 CNOT7Q9UIV1 285 aaKnown RBP4.28□□□□□ -1.72
LINC01965-204ENST00000545549 LRRFIP2Q9Y608 721 aaKnown RBP4.28□□□□□ -1.72
LINC01965-204ENST00000545549 DDX49Q9Y6V7 483 aaKnown RBP4.28□□□□□ -1.72
LINC01965-204ENST00000545549 ARAP2Q8WZ64 1704 aa4.28□□□□□ -1.72
LINC01965-204ENST00000545549 ALPK3Q96L96 1907 aa4.28□□□□□ -1.72
LINC01965-204ENST00000545549 REV3LO60673 3130 aa4.28□□□□□ -1.72
LINC01965-204ENST00000545549 RFX7Q2KHR2 1363 aa4.27□□□□□ -1.73
LINC01965-204ENST00000545549 USP9XQ93008 2570 aaPredicted RBP4.27□□□□□ -1.73
LINC01965-204ENST00000545549 ASTN2O75129 1339 aaPredicted RBP4.27□□□□□ -1.73
LINC01965-204ENST00000545549 MROH5Q6ZUA9 1318 aa4.27□□□□□ -1.73
LINC01965-204ENST00000545549 SALL1Q9NSC2 1324 aa4.27□□□□□ -1.73
LINC01965-204ENST00000545549 MANSC4A6NHS7 340 aaPredicted RBP4.27□□□□□ -1.73
LINC01965-204ENST00000545549 HIP1O00291 1037 aa4.27□□□□□ -1.73
LINC01965-204ENST00000545549 TAF5LO75529 589 aa4.27□□□□□ -1.73
LINC01965-204ENST00000545549 MBD3O95983 291 aa4.27□□□□□ -1.73
LINC01965-204ENST00000545549 ALADP13716 330 aa4.27□□□□□ -1.73
LINC01965-204ENST00000545549 MSNP26038 577 aaKnown RBP4.27□□□□□ -1.73
LINC01965-204ENST00000545549 ADD1P35611 737 aaKnown RBP4.27□□□□□ -1.73
LINC01965-204ENST00000545549 IGHMBP2P38935 993 aaKnown RBP4.27□□□□□ -1.73
LINC01965-204ENST00000545549 ANAPC15P60006 121 aa4.27□□□□□ -1.73
LINC01965-204ENST00000545549 HDLBPQ00341 1268 aaKnown RBP4.27□□□□□ -1.73
LINC01965-204ENST00000545549 TFF2Q03403 129 aa4.27□□□□□ -1.73
LINC01965-204ENST00000545549 CRHR2Q13324 411 aa4.27□□□□□ -1.73
LINC01965-204ENST00000545549 RAB3GAP1Q15042 981 aa4.27□□□□□ -1.73
LINC01965-204ENST00000545549 ERC1Q8IUD2 1116 aa4.27□□□□□ -1.73
LINC01965-204ENST00000545549 RNF135Q8IUD6 432 aa4.27□□□□□ -1.73
LINC01965-204ENST00000545549 PLEKHM2Q8IWE5 1019 aa4.27□□□□□ -1.73
LINC01965-204ENST00000545549 PHTF2Q8N3S3 785 aa4.27□□□□□ -1.73
LINC01965-204ENST00000545549 RILPL2Q969X0 211 aa4.27□□□□□ -1.73
LINC01965-204ENST00000545549 ZNF512BQ96KM6 892 aaPredicted RBP4.27□□□□□ -1.73
LINC01965-204ENST00000545549 MFSD14AQ96MC6 490 aa4.27□□□□□ -1.73
LINC01965-204ENST00000545549 HNRNPABQ99729 332 aaKnown RBP4.27□□□□□ -1.73
LINC01965-204ENST00000545549 GRPEL1Q9HAV7 217 aa4.27□□□□□ -1.73
LINC01965-204ENST00000545549 CYLDQ9NQC7 956 aa4.27□□□□□ -1.73
LINC01965-204ENST00000545549 BRPF3Q9ULD4 1205 aa4.27□□□□□ -1.73
LINC01965-204ENST00000545549 PA2G4Q9UQ80 394 aaKnown RBP4.27□□□□□ -1.73
LINC01965-204ENST00000545549 PCDHB11Q9Y5F2 797 aa4.27□□□□□ -1.73
LINC01965-204ENST00000545549 ATP6V1DQ9Y5K8 247 aa4.27□□□□□ -1.73
LINC01965-204ENST00000545549 LAMB1P07942 1786 aa4.27□□□□□ -1.73
LINC01965-204ENST00000545549 MYO3BQ8WXR4 1341 aa4.26□□□□□ -1.73
LINC01965-204ENST00000545549 H7C1D1 291 aa4.26□□□□□ -1.73
LINC01965-204ENST00000545549 WNT10BO00744 389 aa4.26□□□□□ -1.73
LINC01965-204ENST00000545549 LILRA1O75019 489 aa4.26□□□□□ -1.73
LINC01965-204ENST00000545549 GNRH1P01148 92 aa4.26□□□□□ -1.73
LINC01965-204ENST00000545549 SDSP20132 328 aa4.26□□□□□ -1.73
LINC01965-204ENST00000545549 MX1P20591 662 aa4.26□□□□□ -1.73
LINC01965-204ENST00000545549 ADORA1P30542 326 aa4.26□□□□□ -1.73
LINC01965-204ENST00000545549 IL15P40933 162 aaPredicted RBP4.26□□□□□ -1.73
LINC01965-204ENST00000545549 GYG1P46976 350 aa4.26□□□□□ -1.73
LINC01965-204ENST00000545549 SCTRP47872 440 aa4.26□□□□□ -1.73
LINC01965-204ENST00000545549 SMCPP49901 116 aaPredicted RBP4.26□□□□□ -1.73
LINC01965-204ENST00000545549 MCCD1P59942 119 aaPredicted RBP4.26□□□□□ -1.73
LINC01965-204ENST00000545549 UBXN2AP68543 259 aa4.26□□□□□ -1.73
LINC01965-204ENST00000545549 MAP3K10Q02779 954 aa4.26□□□□□ -1.73
LINC01965-204ENST00000545549 DHX9Q08211 1270 aaKnown RBP4.26□□□□□ -1.73
LINC01965-204ENST00000545549 CCDC173Q0VFZ6 552 aa4.26□□□□□ -1.73
LINC01965-204ENST00000545549 PUM3Q15397 648 aaKnown RBP4.26□□□□□ -1.73
LINC01965-204ENST00000545549 CCDC85BQ15834 202 aaPredicted RBP4.26□□□□□ -1.73
LINC01965-204ENST00000545549 CTC1Q2NKJ3 1217 aa4.26□□□□□ -1.73
LINC01965-204ENST00000545549 SLFNL1Q499Z3 407 aa4.26□□□□□ -1.73
LINC01965-204ENST00000545549 GLIPR1L2Q4G1C9 344 aa4.26□□□□□ -1.73
LINC01965-204ENST00000545549 LDLRAD1Q5T700 205 aa4.26□□□□□ -1.73
LINC01965-204ENST00000545549 FKBP1CQ5VVH2 108 aa4.26□□□□□ -1.73
LINC01965-204ENST00000545549 APOBEC3HQ6NTF7 200 aaKnown RBP4.26□□□□□ -1.73
LINC01965-204ENST00000545549 TRIM46Q7Z4K8 759 aa4.26□□□□□ -1.73
LINC01965-204ENST00000545549 CRIPAKQ8N1N5 446 aa4.26□□□□□ -1.73
LINC01965-204ENST00000545549 TNPO1Q92973 898 aaKnown RBP4.26□□□□□ -1.73
LINC01965-204ENST00000545549 GLMNQ92990 594 aa4.26□□□□□ -1.73
LINC01965-204ENST00000545549 KIF1BPQ96EK5 621 aa4.26□□□□□ -1.73
LINC01965-204ENST00000545549 AGBL1Q96MI9 1066 aa4.26□□□□□ -1.73
LINC01965-204ENST00000545549 TEPSINQ96N21 525 aa4.26□□□□□ -1.73
LINC01965-204ENST00000545549 UCN2Q96RP3 112 aa4.26□□□□□ -1.73
LINC01965-204ENST00000545549 MPHOSPH8Q99549 860 aa4.26□□□□□ -1.73
LINC01965-204ENST00000545549 MXD3Q9BW11 206 aa4.26□□□□□ -1.73
LINC01965-204ENST00000545549 IRF2BPLQ9H1B7 796 aa4.26□□□□□ -1.73
LINC01965-204ENST00000545549 OSBPL3Q9H4L5 887 aa4.26□□□□□ -1.73
LINC01965-204ENST00000545549 ANO2Q9NQ90 1003 aa4.26□□□□□ -1.73
LINC01965-204ENST00000545549 FAM86C1Q9NVL1 165 aa4.26□□□□□ -1.73
LINC01965-204ENST00000545549 ANKIB1Q9P2G1 1089 aa4.26□□□□□ -1.73
LINC01965-204ENST00000545549 SUGT1Q9Y2Z0 365 aa4.26□□□□□ -1.73
LINC01965-204ENST00000545549 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.26□□□□□ -1.73
LINC01965-204ENST00000545549 PCDHAC2Q9Y5I4 1007 aa4.26□□□□□ -1.73
LINC01965-204ENST00000545549 DNAH12Q6ZR08 3092 aa4.26□□□□□ -1.73
LINC01965-204ENST00000545549 TCF20Q9UGU0 1960 aaKnown RBP4.25□□□□□ -1.73
LINC01965-204ENST00000545549 GAKO14976 1311 aa4.25□□□□□ -1.73
LINC01965-204ENST00000545549 SALL3Q9BXA9 1300 aa4.25□□□□□ -1.73
LINC01965-204ENST00000545549 PROB1E7EW31 1015 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms