RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 ANKRD39Q53RE8 183 aa6.09□□□□□ -1.43
LEMD3-204ENST00000542032 PRR23BQ6ZRT6 265 aa6.09□□□□□ -1.43
LEMD3-204ENST00000542032 LSRQ86X29 649 aaPredicted RBP6.09□□□□□ -1.43
LEMD3-204ENST00000542032 OXR1Q8N573 874 aa6.09□□□□□ -1.43
LEMD3-204ENST00000542032 ANKS4BQ8N8V4 417 aa6.09□□□□□ -1.43
LEMD3-204ENST00000542032 SHISA4Q96DD7 197 aa6.09□□□□□ -1.43
LEMD3-204ENST00000542032 TRHRP34981 398 aaPredicted RBP6.08□□□□□ -1.44
LEMD3-204ENST00000542032 CTSKP43235 329 aa6.08□□□□□ -1.44
LEMD3-204ENST00000542032 CHRNEQ04844 493 aa6.08□□□□□ -1.44
LEMD3-204ENST00000542032 DUSP4Q13115 394 aa6.08□□□□□ -1.44
LEMD3-204ENST00000542032 ZYXQ15942 572 aaKnown RBP6.08□□□□□ -1.44
LEMD3-204ENST00000542032 UNC5AQ6ZN44 842 aa6.08□□□□□ -1.44
LEMD3-204ENST00000542032 RUFY4Q6ZNE9 571 aa6.08□□□□□ -1.44
LEMD3-204ENST00000542032 PPFIBP1Q86W92 1011 aa6.08□□□□□ -1.44
LEMD3-204ENST00000542032 SMARCC1Q92922 1105 aaPredicted RBP6.08□□□□□ -1.44
LEMD3-204ENST00000542032 GPRASP2Q96D09 838 aa6.08□□□□□ -1.44
LEMD3-204ENST00000542032 FOXP3Q9BZS1 431 aa6.08□□□□□ -1.44
LEMD3-204ENST00000542032 MKRN2Q9H000 416 aaKnown RBP6.08□□□□□ -1.44
LEMD3-204ENST00000542032 CHST7Q9NS84 486 aa6.08□□□□□ -1.44
LEMD3-204ENST00000542032 TCFL5Q9UL49 500 aa6.08□□□□□ -1.44
LEMD3-204ENST00000542032 MINPP1Q9UNW1 487 aa6.08□□□□□ -1.44
LEMD3-204ENST00000542032 PCDHB12Q9Y5F1 795 aa6.08□□□□□ -1.44
LEMD3-204ENST00000542032 EFEMP2O95967 443 aa6.07□□□□□ -1.44
LEMD3-204ENST00000542032 GIPRP48546 466 aa6.07□□□□□ -1.44
LEMD3-204ENST00000542032 CEBPAP49715 358 aaPredicted RBP6.07□□□□□ -1.44
LEMD3-204ENST00000542032 PCBP3P57721 371 aaKnown RBP6.07□□□□□ -1.44
LEMD3-204ENST00000542032 SNX17Q15036 470 aa6.07□□□□□ -1.44
LEMD3-204ENST00000542032 C9orf131Q5VYM1 1079 aa6.07□□□□□ -1.44
LEMD3-204ENST00000542032 SPPL2CQ8IUH8 684 aa6.07□□□□□ -1.44
LEMD3-204ENST00000542032 C7orf61Q8IZ16 206 aa6.07□□□□□ -1.44
LEMD3-204ENST00000542032 TGIF2Q9GZN2 237 aa6.07□□□□□ -1.44
LEMD3-204ENST00000542032 RNF32Q9H0A6 362 aa6.07□□□□□ -1.44
LEMD3-204ENST00000542032 C19orf44Q9H6X5 657 aa6.07□□□□□ -1.44
LEMD3-204ENST00000542032 PODXL2Q9NZ53 605 aa6.07□□□□□ -1.44
LEMD3-204ENST00000542032 EFR3BQ9Y2G0 817 aa6.07□□□□□ -1.44
LEMD3-204ENST00000542032 LTBP3Q9NS15 1303 aa6.06□□□□□ -1.44
LEMD3-204ENST00000542032 KRT1P04264 644 aa6.06□□□□□ -1.44
LEMD3-204ENST00000542032 BMP8BP34820 402 aa6.06□□□□□ -1.44
LEMD3-204ENST00000542032 KIR2DL1P43626 348 aaPredicted RBP6.06□□□□□ -1.44
LEMD3-204ENST00000542032 KIR2DL2P43627 348 aaPredicted RBP6.06□□□□□ -1.44
LEMD3-204ENST00000542032 MPZL3Q6UWV2 235 aa6.06□□□□□ -1.44
LEMD3-204ENST00000542032 SYDE1Q6ZW31 735 aaPredicted RBP6.06□□□□□ -1.44
LEMD3-204ENST00000542032 AMIGO3Q86WK7 504 aa6.06□□□□□ -1.44
LEMD3-204ENST00000542032 C19orf47Q8N9M1 422 aaKnown RBP6.06□□□□□ -1.44
LEMD3-204ENST00000542032 MAP6Q96JE9 813 aa6.06□□□□□ -1.44
LEMD3-204ENST00000542032 CWC22Q9HCG8 908 aaKnown RBP6.06□□□□□ -1.44
LEMD3-204ENST00000542032 GFOD1Q9NXC2 390 aa6.06□□□□□ -1.44
LEMD3-204ENST00000542032 ZNF214Q9UL59 606 aaPredicted RBP6.06□□□□□ -1.44
LEMD3-204ENST00000542032 ZNF205O95201 554 aa6.05□□□□□ -1.44
LEMD3-204ENST00000542032 SYPP08247 313 aa6.05□□□□□ -1.44
LEMD3-204ENST00000542032 C1QTNF9P0C862 333 aa6.05□□□□□ -1.44
LEMD3-204ENST00000542032 RPL10P27635 214 aaKnown RBP6.05□□□□□ -1.44
LEMD3-204ENST00000542032 KRTAP10-2P60368 255 aa6.05□□□□□ -1.44
LEMD3-204ENST00000542032 AXDND1Q5T1B0 1012 aaPredicted RBP6.05□□□□□ -1.44
LEMD3-204ENST00000542032 ZPBP2Q6X784 338 aa6.05□□□□□ -1.44
LEMD3-204ENST00000542032 CCDC81Q6ZN84 652 aa6.05□□□□□ -1.44
LEMD3-204ENST00000542032 SYTL4Q96C24 671 aaPredicted RBP6.05□□□□□ -1.44
LEMD3-204ENST00000542032 SHDQ96IW2 340 aa6.05□□□□□ -1.44
LEMD3-204ENST00000542032 YBX2Q9Y2T7 364 aaKnown RBP6.05□□□□□ -1.44
LEMD3-204ENST00000542032 FAM86C2PA6NEL3 165 aa6.04□□□□□ -1.44
LEMD3-204ENST00000542032 NRDCO43847 1150 aa6.04□□□□□ -1.44
LEMD3-204ENST00000542032 EIF6P56537 245 aaKnown RBP6.04□□□□□ -1.44
LEMD3-204ENST00000542032 TDRD10Q5VZ19 366 aaKnown RBP6.04□□□□□ -1.44
LEMD3-204ENST00000542032 FBXW10Q5XX13 1052 aa6.04□□□□□ -1.44
LEMD3-204ENST00000542032 DCAF15Q66K64 600 aa6.04□□□□□ -1.44
LEMD3-204ENST00000542032 WAPLQ7Z5K2 1190 aa6.04□□□□□ -1.44
LEMD3-204ENST00000542032 NLRX1Q86UT6 975 aa6.04□□□□□ -1.44
LEMD3-204ENST00000542032 IRF2BP1Q8IU81 584 aa6.04□□□□□ -1.44
LEMD3-204ENST00000542032 CCDC144CPQ8IYA2 1237 aa6.04□□□□□ -1.44
LEMD3-204ENST00000542032 FBXO15Q8NCQ5 510 aaPredicted RBP6.04□□□□□ -1.44
LEMD3-204ENST00000542032 OR6P1Q8NGX9 317 aa6.04□□□□□ -1.44
LEMD3-204ENST00000542032 SEC16BQ96JE7 1060 aa6.04□□□□□ -1.44
LEMD3-204ENST00000542032 HHIPL1Q96JK4 782 aa6.04□□□□□ -1.44
LEMD3-204ENST00000542032 FCRL2Q96LA5 508 aaPredicted RBP6.04□□□□□ -1.44
LEMD3-204ENST00000542032 SRRTQ9BXP5 876 aaKnown RBP6.04□□□□□ -1.44
LEMD3-204ENST00000542032 ACBD3Q9H3P7 528 aa6.04□□□□□ -1.44
LEMD3-204ENST00000542032 NSUN3Q9H649 340 aaKnown RBP6.04□□□□□ -1.44
LEMD3-204ENST00000542032 FBXL21Q9UKT6 434 aa6.04□□□□□ -1.44
LEMD3-204ENST00000542032 CCDC9Q9Y3X0 531 aaKnown RBP6.04□□□□□ -1.44
LEMD3-204ENST00000542032 A0A1W2PQH9 124 aa6.03□□□□□ -1.44
LEMD3-204ENST00000542032 FADS2P1A8MWK0 482 aa6.03□□□□□ -1.44
LEMD3-204ENST00000542032 CBFA2T2O43439 604 aa6.03□□□□□ -1.44
LEMD3-204ENST00000542032 FOXD2O60548 495 aaPredicted RBP6.03□□□□□ -1.44
LEMD3-204ENST00000542032 GSNP06396 782 aa6.03□□□□□ -1.44
LEMD3-204ENST00000542032 VAV1P15498 845 aa6.03□□□□□ -1.44
LEMD3-204ENST00000542032 CD247P20963 164 aa6.03□□□□□ -1.44
LEMD3-204ENST00000542032 ENDOUP21128 410 aaKnown RBP6.03□□□□□ -1.44
LEMD3-204ENST00000542032 RTP2Q5QGT7 225 aa6.03□□□□□ -1.44
LEMD3-204ENST00000542032 INTS4Q96HW7 963 aaKnown RBP6.03□□□□□ -1.44
LEMD3-204ENST00000542032 DIRC2Q96SL1 478 aa6.03□□□□□ -1.44
LEMD3-204ENST00000542032 SLC6A17Q9H1V8 727 aa6.03□□□□□ -1.44
LEMD3-204ENST00000542032 GP6Q9HCN6 339 aa6.03□□□□□ -1.44
LEMD3-204ENST00000542032 ERVK13-1Q9NX77 482 aa6.03□□□□□ -1.44
LEMD3-204ENST00000542032 SLC12A7Q9Y666 1083 aa6.03□□□□□ -1.44
LEMD3-204ENST00000542032 USP2O75604 605 aaPredicted RBP6.02□□□□□ -1.45
LEMD3-204ENST00000542032 MED14OSP0DP75 135 aa6.02□□□□□ -1.45
LEMD3-204ENST00000542032 NASPP49321 788 aaPredicted RBP6.02□□□□□ -1.45
LEMD3-204ENST00000542032 CASP7P55210 303 aa6.02□□□□□ -1.45
LEMD3-204ENST00000542032 ZNF445P59923 1031 aa6.02□□□□□ -1.45
LEMD3-204ENST00000542032 CRTC3Q6UUV7 619 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms