RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 FHOD1Q9Y613 1164 aa9.74□□□□□ -0.85
YBX3-210ENST00000540975 FKTNO75072 461 aa9.73□□□□□ -0.85
YBX3-210ENST00000540975 GSNP06396 782 aa9.73□□□□□ -0.85
YBX3-210ENST00000540975 VAV1P15498 845 aa9.73□□□□□ -0.85
YBX3-210ENST00000540975 ZC3H6P61129 1189 aaKnown RBP9.73□□□□□ -0.85
YBX3-210ENST00000540975 KIAA1211LQ6NV74 962 aa9.73□□□□□ -0.85
YBX3-210ENST00000540975 VHLLQ6RSH7 139 aa9.73□□□□□ -0.85
YBX3-210ENST00000540975 WAPLQ7Z5K2 1190 aa9.73□□□□□ -0.85
YBX3-210ENST00000540975 ZSWIM9Q86XI8 627 aa9.73□□□□□ -0.85
YBX3-210ENST00000540975 MYLIPQ8WY64 445 aa9.73□□□□□ -0.85
YBX3-210ENST00000540975 G6PC3Q9BUM1 346 aa9.73□□□□□ -0.85
YBX3-210ENST00000540975 KLHL25Q9H0H3 589 aa9.73□□□□□ -0.85
YBX3-210ENST00000540975 RNF114Q9Y508 228 aa9.73□□□□□ -0.85
YBX3-210ENST00000540975 ITGA4P13612 1032 aa9.72□□□□□ -0.85
YBX3-210ENST00000540975 RAC2P15153 192 aa9.72□□□□□ -0.85
YBX3-210ENST00000540975 DUSP4Q13115 394 aa9.72□□□□□ -0.85
YBX3-210ENST00000540975 KCNMB1Q16558 191 aa9.72□□□□□ -0.85
YBX3-210ENST00000540975 NAALADL2Q58DX5 795 aa9.72□□□□□ -0.85
YBX3-210ENST00000540975 TNNI3KQ59H18 835 aa9.72□□□□□ -0.85
YBX3-210ENST00000540975 CRTC3Q6UUV7 619 aa9.72□□□□□ -0.85
YBX3-210ENST00000540975 ZPBP2Q6X784 338 aa9.72□□□□□ -0.85
YBX3-210ENST00000540975 SPPL2CQ8IUH8 684 aa9.72□□□□□ -0.85
YBX3-210ENST00000540975 FIBCD1Q8N539 461 aa9.72□□□□□ -0.85
YBX3-210ENST00000540975 OXR1Q8N573 874 aa9.72□□□□□ -0.85
YBX3-210ENST00000540975 FMNL2Q96PY5 1086 aa9.72□□□□□ -0.85
YBX3-210ENST00000540975 ZNF408Q9H9D4 720 aa9.72□□□□□ -0.85
YBX3-210ENST00000540975 ZMYM5Q9UJ78 669 aa9.72□□□□□ -0.85
YBX3-210ENST00000540975 DIS3Q9Y2L1 958 aaKnown RBP9.72□□□□□ -0.85
YBX3-210ENST00000540975 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.72□□□□□ -0.85
YBX3-210ENST00000540975 ZNF205O95201 554 aa9.71□□□□□ -0.86
YBX3-210ENST00000540975 EPHX1P07099 455 aa9.71□□□□□ -0.86
YBX3-210ENST00000540975 TRHRP34981 398 aaPredicted RBP9.71□□□□□ -0.86
YBX3-210ENST00000540975 ABHD4Q8TB40 342 aa9.71□□□□□ -0.86
YBX3-210ENST00000540975 C19orf44Q9H6X5 657 aa9.71□□□□□ -0.86
YBX3-210ENST00000540975 WHRNQ9P202 907 aa9.71□□□□□ -0.86
YBX3-210ENST00000540975 SUSD2Q9UGT4 822 aa9.71□□□□□ -0.86
YBX3-210ENST00000540975 GLI1P08151 1106 aa9.7□□□□□ -0.86
YBX3-210ENST00000540975 NR0B2Q15466 257 aa9.7□□□□□ -0.86
YBX3-210ENST00000540975 TMEM67Q5HYA8 995 aa9.7□□□□□ -0.86
YBX3-210ENST00000540975 CWF19L1Q69YN2 538 aaKnown RBP9.7□□□□□ -0.86
YBX3-210ENST00000540975 ADAT2Q7Z6V5 191 aaKnown RBP9.7□□□□□ -0.86
YBX3-210ENST00000540975 FGD4Q96M96 766 aa9.7□□□□□ -0.86
YBX3-210ENST00000540975 NOL6Q9H6R4 1146 aaKnown RBP9.7□□□□□ -0.86
YBX3-210ENST00000540975 ACTR10Q9NZ32 417 aa9.7□□□□□ -0.86
YBX3-210ENST00000540975 SF3B6Q9Y3B4 125 aaKnown RBP9.7□□□□□ -0.86
YBX3-210ENST00000540975 FITM1A5D6W6 292 aa9.69□□□□□ -0.86
YBX3-210ENST00000540975 ZNF503-AS2A6NEH8 195 aa9.69□□□□□ -0.86
YBX3-210ENST00000540975 H0Y8X5 98 aa9.69□□□□□ -0.86
YBX3-210ENST00000540975 NOP2P46087 812 aaKnown RBP9.69□□□□□ -0.86
YBX3-210ENST00000540975 CHRNEQ04844 493 aa9.69□□□□□ -0.86
YBX3-210ENST00000540975 ANKS4BQ8N8V4 417 aa9.69□□□□□ -0.86
YBX3-210ENST00000540975 GBP3Q9H0R5 595 aa9.69□□□□□ -0.86
YBX3-210ENST00000540975 PPM1BO75688 479 aa9.68□□□□□ -0.86
YBX3-210ENST00000540975 PPP2R5DQ14738 602 aa9.68□□□□□ -0.86
YBX3-210ENST00000540975 NCAPHQ15003 741 aa9.68□□□□□ -0.86
YBX3-210ENST00000540975 RTP2Q5QGT7 225 aa9.68□□□□□ -0.86
YBX3-210ENST00000540975 ADCY4Q8NFM4 1077 aa9.68□□□□□ -0.86
YBX3-210ENST00000540975 MAP6Q96JE9 813 aa9.68□□□□□ -0.86
YBX3-210ENST00000540975 SLC12A9Q9BXP2 914 aa9.68□□□□□ -0.86
YBX3-210ENST00000540975 ANKRD34BA5PLL1 514 aa9.67□□□□□ -0.86
YBX3-210ENST00000540975 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.67□□□□□ -0.86
YBX3-210ENST00000540975 ENDOUP21128 410 aaKnown RBP9.67□□□□□ -0.86
YBX3-210ENST00000540975 TIGD5Q53EQ6 642 aa9.67□□□□□ -0.86
YBX3-210ENST00000540975 LILRA2Q8N149 483 aa9.67□□□□□ -0.86
YBX3-210ENST00000540975 ARHGEF39Q8N4T4 335 aa9.67□□□□□ -0.86
YBX3-210ENST00000540975 RCC1LQ96I51 464 aaKnown RBP9.67□□□□□ -0.86
YBX3-210ENST00000540975 FCRL3Q96P31 734 aaPredicted RBP9.67□□□□□ -0.86
YBX3-210ENST00000540975 APBA2Q99767 749 aa9.67□□□□□ -0.86
YBX3-210ENST00000540975 CDADC1Q9BWV3 514 aa9.67□□□□□ -0.86
YBX3-210ENST00000540975 AP5S1Q9NUS5 200 aa9.67□□□□□ -0.86
YBX3-210ENST00000540975 NOTOA8MTQ0 251 aa9.66□□□□□ -0.86
YBX3-210ENST00000540975 GSTM1P09488 218 aa9.66□□□□□ -0.86
YBX3-210ENST00000540975 KIR2DL1P43626 348 aaPredicted RBP9.66□□□□□ -0.86
YBX3-210ENST00000540975 KIR2DL2P43627 348 aaPredicted RBP9.66□□□□□ -0.86
YBX3-210ENST00000540975 POU4F1Q01851 419 aa9.66□□□□□ -0.86
YBX3-210ENST00000540975 LARP1BQ659C4 914 aaKnown RBP9.66□□□□□ -0.86
YBX3-210ENST00000540975 C6orf15Q6UXA7 325 aaPredicted RBP9.66□□□□□ -0.86
YBX3-210ENST00000540975 ZNF513Q8N8E2 541 aaPredicted RBP9.66□□□□□ -0.86
YBX3-210ENST00000540975 LIN37Q96GY3 246 aaPredicted RBP9.66□□□□□ -0.86
YBX3-210ENST00000540975 HHIPL1Q96JK4 782 aa9.66□□□□□ -0.86
YBX3-210ENST00000540975 ZDHHC15Q96MV8 337 aa9.66□□□□□ -0.86
YBX3-210ENST00000540975 FAM53CQ9NYF3 392 aa9.66□□□□□ -0.86
YBX3-210ENST00000540975 TNFRSF10DQ9UBN6 386 aa9.66□□□□□ -0.86
YBX3-210ENST00000540975 PSPNO60542 156 aa9.65□□□□□ -0.86
YBX3-210ENST00000540975 FXNQ16595 210 aa9.65□□□□□ -0.86
YBX3-210ENST00000540975 FAM178BQ8IXR5 827 aa9.65□□□□□ -0.86
YBX3-210ENST00000540975 TMEM52Q8NDY8 209 aa9.65□□□□□ -0.86
YBX3-210ENST00000540975 MICAL1Q8TDZ2 1067 aa9.65□□□□□ -0.86
YBX3-210ENST00000540975 FCRL2Q96LA5 508 aaPredicted RBP9.65□□□□□ -0.86
YBX3-210ENST00000540975 C8orf37Q96NL8 207 aa9.65□□□□□ -0.86
YBX3-210ENST00000540975 KRTAP4-8Q9BYQ9 185 aa9.65□□□□□ -0.86
YBX3-210ENST00000540975 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.65□□□□□ -0.86
YBX3-210ENST00000540975 FADS2P1A8MWK0 482 aa9.64□□□□□ -0.87
YBX3-210ENST00000540975 USP2O75604 605 aaPredicted RBP9.64□□□□□ -0.87
YBX3-210ENST00000540975 DDAH1O94760 285 aa9.64□□□□□ -0.87
YBX3-210ENST00000540975 SNX17Q15036 470 aa9.64□□□□□ -0.87
YBX3-210ENST00000540975 SLC14A2Q15849 920 aa9.64□□□□□ -0.87
YBX3-210ENST00000540975 ANKS3Q6ZW76 656 aa9.64□□□□□ -0.87
YBX3-210ENST00000540975 RNF32Q9H0A6 362 aa9.64□□□□□ -0.87
YBX3-210ENST00000540975 ERVK13-1Q9NX77 482 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms