RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 SAR1BQ9Y6B6 198 aa6.54□□□□□ -1.36
CHD4-206ENST00000536999 ADAMTSL1Q8N6G6 1762 aa6.54□□□□□ -1.36
CHD4-206ENST00000536999 CEP290O15078 2479 aa6.53□□□□□ -1.36
CHD4-206ENST00000536999 ZNF609O15014 1411 aa6.53□□□□□ -1.36
CHD4-206ENST00000536999 BICDL2A1A5D9 508 aa6.53□□□□□ -1.36
CHD4-206ENST00000536999 TRIM75PA6NK02 468 aa6.53□□□□□ -1.36
CHD4-206ENST00000536999 EIF3CLB5ME19 914 aaKnown RBP6.53□□□□□ -1.36
CHD4-206ENST00000536999 MFAP3LO75121 409 aa6.53□□□□□ -1.36
CHD4-206ENST00000536999 TRPA1O75762 1119 aa6.53□□□□□ -1.36
CHD4-206ENST00000536999 ERLIN2O94905 339 aa6.53□□□□□ -1.36
CHD4-206ENST00000536999 FMNL1O95466 1100 aaPredicted RBP6.53□□□□□ -1.36
CHD4-206ENST00000536999 FDPSP14324 419 aaKnown RBP6.53□□□□□ -1.36
CHD4-206ENST00000536999 TCP1P17987 556 aaKnown RBP6.53□□□□□ -1.36
CHD4-206ENST00000536999 ATP2B1P20020 1258 aa6.53□□□□□ -1.36
CHD4-206ENST00000536999 TM4SF1P30408 202 aa6.53□□□□□ -1.36
CHD4-206ENST00000536999 MDM2Q00987 491 aaPredicted RBP6.53□□□□□ -1.36
CHD4-206ENST00000536999 IFFO1Q0D2I5 559 aa6.53□□□□□ -1.36
CHD4-206ENST00000536999 SLMAPQ14BN4 828 aa6.53□□□□□ -1.36
CHD4-206ENST00000536999 PTPAQ15257 358 aa6.53□□□□□ -1.36
CHD4-206ENST00000536999 SPA17Q15506 151 aa6.53□□□□□ -1.36
CHD4-206ENST00000536999 PKN2Q16513 984 aaKnown RBP6.53□□□□□ -1.36
CHD4-206ENST00000536999 CCDC178Q5BJE1 867 aa6.53□□□□□ -1.36
CHD4-206ENST00000536999 FIGNQ5HY92 759 aa6.53□□□□□ -1.36
CHD4-206ENST00000536999 SOGA3Q5TF21 947 aa6.53□□□□□ -1.36
CHD4-206ENST00000536999 ARL6IP4Q66PJ3 421 aaKnown RBP6.53□□□□□ -1.36
CHD4-206ENST00000536999 KRT40Q6A162 431 aa6.53□□□□□ -1.36
CHD4-206ENST00000536999 MCTP2Q6DN12 878 aa6.53□□□□□ -1.36
CHD4-206ENST00000536999 DDX46Q7L014 1031 aaKnown RBP6.53□□□□□ -1.36
CHD4-206ENST00000536999 TADA2BQ86TJ2 420 aa6.53□□□□□ -1.36
CHD4-206ENST00000536999 CCDC84Q86UT8 332 aaPredicted RBP6.53□□□□□ -1.36
CHD4-206ENST00000536999 TMEM139Q8IV31 216 aa6.53□□□□□ -1.36
CHD4-206ENST00000536999 C10orf67Q8IYJ2 551 aa6.53□□□□□ -1.36
CHD4-206ENST00000536999 TRIM58Q8NG06 486 aa6.53□□□□□ -1.36
CHD4-206ENST00000536999 SP7Q8TDD2 431 aaPredicted RBP6.53□□□□□ -1.36
CHD4-206ENST00000536999 XAGE3Q8WTP9 111 aa6.53□□□□□ -1.36
CHD4-206ENST00000536999 DHX58Q96C10 678 aa6.53□□□□□ -1.36
CHD4-206ENST00000536999 KAZALD1Q96I82 304 aa6.53□□□□□ -1.36
CHD4-206ENST00000536999 HHIPL1Q96JK4 782 aa6.53□□□□□ -1.36
CHD4-206ENST00000536999 TCEANC2Q96MN5 208 aa6.53□□□□□ -1.36
CHD4-206ENST00000536999 EIF3CQ99613 913 aaKnown RBP6.53□□□□□ -1.36
CHD4-206ENST00000536999 DBNDD2Q9BQY9 259 aa6.53□□□□□ -1.36
CHD4-206ENST00000536999 EDEM3Q9BZQ6 932 aa6.53□□□□□ -1.36
CHD4-206ENST00000536999 LRRC27Q9C0I9 530 aa6.53□□□□□ -1.36
CHD4-206ENST00000536999 ZNF408Q9H9D4 720 aa6.53□□□□□ -1.36
CHD4-206ENST00000536999 LGR6Q9HBX8 967 aa6.53□□□□□ -1.36
CHD4-206ENST00000536999 PDE11AQ9HCR9 933 aa6.53□□□□□ -1.36
CHD4-206ENST00000536999 LIMA1Q9UHB6 759 aaKnown RBP6.53□□□□□ -1.36
CHD4-206ENST00000536999 HDAC9Q9UKV0 1011 aa6.53□□□□□ -1.36
CHD4-206ENST00000536999 FAM184BQ9ULE4 1060 aa6.53□□□□□ -1.36
CHD4-206ENST00000536999 LUC7L2Q9Y383 392 aaKnown RBP6.53□□□□□ -1.36
CHD4-206ENST00000536999 KDM3BQ7LBC6 1761 aa6.53□□□□□ -1.36
CHD4-206ENST00000536999 RTL9Q8NET4 1388 aa6.53□□□□□ -1.36
CHD4-206ENST00000536999 DLEC1Q9Y238 1755 aa6.52□□□□□ -1.37
CHD4-206ENST00000536999 GOLGA6CA6NDK9 693 aa6.52□□□□□ -1.37
CHD4-206ENST00000536999 GOLGA6BA6NDN3 693 aa6.52□□□□□ -1.37
CHD4-206ENST00000536999 GOLGA6L10A6NI86 522 aa6.52□□□□□ -1.37
CHD4-206ENST00000536999 C19orf67A6NJJ6 358 aa6.52□□□□□ -1.37
CHD4-206ENST00000536999 GOLGA8AA7E2F4 631 aa6.52□□□□□ -1.37
CHD4-206ENST00000536999 BIN1O00499 593 aa6.52□□□□□ -1.37
CHD4-206ENST00000536999 LAD1O00515 517 aa6.52□□□□□ -1.37
CHD4-206ENST00000536999 N4BP3O15049 544 aa6.52□□□□□ -1.37
CHD4-206ENST00000536999 SHOX2O60902 331 aaPredicted RBP6.52□□□□□ -1.37
CHD4-206ENST00000536999 HSF2BPO75031 334 aa6.52□□□□□ -1.37
CHD4-206ENST00000536999 TACC1O75410 805 aa6.52□□□□□ -1.37
CHD4-206ENST00000536999 FGAP02671 866 aa6.52□□□□□ -1.37
CHD4-206ENST00000536999 MMP1P03956 469 aa6.52□□□□□ -1.37
CHD4-206ENST00000536999 SERPINB2P05120 415 aa6.52□□□□□ -1.37
CHD4-206ENST00000536999 GOLGA6DP0CG33 693 aa6.52□□□□□ -1.37
CHD4-206ENST00000536999 ERCC3P19447 782 aa6.52□□□□□ -1.37
CHD4-206ENST00000536999 CALML3P27482 149 aa6.52□□□□□ -1.37
CHD4-206ENST00000536999 NOP2P46087 812 aaKnown RBP6.52□□□□□ -1.37
CHD4-206ENST00000536999 DNM2P50570 870 aa6.52□□□□□ -1.37
CHD4-206ENST00000536999 VAV2P52735 878 aa6.52□□□□□ -1.37
CHD4-206ENST00000536999 USP14P54578 494 aa6.52□□□□□ -1.37
CHD4-206ENST00000536999 AMPD3Q01432 767 aa6.52□□□□□ -1.37
CHD4-206ENST00000536999 KIF5AQ12840 1032 aa6.52□□□□□ -1.37
CHD4-206ENST00000536999 MAP3K12Q12852 859 aa6.52□□□□□ -1.37
CHD4-206ENST00000536999 AIMP1Q12904 312 aaKnown RBP6.52□□□□□ -1.37
CHD4-206ENST00000536999 LONRF3Q496Y0 759 aa6.52□□□□□ -1.37
CHD4-206ENST00000536999 PAPD7Q5XG87 772 aaKnown RBP6.52□□□□□ -1.37
CHD4-206ENST00000536999 GALNT17Q6IS24 598 aa6.52□□□□□ -1.37
CHD4-206ENST00000536999 FOXR2Q6PJQ5 311 aa6.52□□□□□ -1.37
CHD4-206ENST00000536999 SHC4Q6S5L8 630 aa6.52□□□□□ -1.37
CHD4-206ENST00000536999 LMBR1LQ6UX01 489 aa6.52□□□□□ -1.37
CHD4-206ENST00000536999 FMNL3Q8IVF7 1028 aa6.52□□□□□ -1.37
CHD4-206ENST00000536999 MICALL1Q8N3F8 863 aa6.52□□□□□ -1.37
CHD4-206ENST00000536999 RNF10Q8N5U6 811 aaKnown RBP6.52□□□□□ -1.37
CHD4-206ENST00000536999 NEK11Q8NG66 645 aa6.52□□□□□ -1.37
CHD4-206ENST00000536999 MAP3K14Q99558 947 aa6.52□□□□□ -1.37
CHD4-206ENST00000536999 NUP88Q99567 741 aaPredicted RBP6.52□□□□□ -1.37
CHD4-206ENST00000536999 PLA2G12BQ9BX93 195 aa6.52□□□□□ -1.37
CHD4-206ENST00000536999 RNF26Q9BY78 433 aaPredicted RBP6.52□□□□□ -1.37
CHD4-206ENST00000536999 THAP9Q9H5L6 903 aa6.52□□□□□ -1.37
CHD4-206ENST00000536999 ACTR5Q9H9F9 607 aaPredicted RBP6.52□□□□□ -1.37
CHD4-206ENST00000536999 GOLGA6AQ9NYA3 693 aa6.52□□□□□ -1.37
CHD4-206ENST00000536999 ADD3Q9UEY8 706 aaKnown RBP6.52□□□□□ -1.37
CHD4-206ENST00000536999 MAN1B1Q9UKM7 699 aa6.52□□□□□ -1.37
CHD4-206ENST00000536999 EPN1Q9Y6I3 576 aaPredicted RBP6.52□□□□□ -1.37
CHD4-206ENST00000536999 RGPD2P0DJD1 1756 aa6.52□□□□□ -1.37
CHD4-206ENST00000536999 MAST3O60307 1309 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms