RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 SUGT1Q9Y2Z0 365 aa8.69□□□□□ -1.02
NIPBL-205ENST00000505998 A0A087WZG4 1122 aa8.68□□□□□ -1.02
NIPBL-205ENST00000505998 SSU72P8A0A1W2PR75 194 aa8.68□□□□□ -1.02
NIPBL-205ENST00000505998 FUT4P22083 530 aa8.68□□□□□ -1.02
NIPBL-205ENST00000505998 EGR3Q06889 387 aa8.68□□□□□ -1.02
NIPBL-205ENST00000505998 PLCL1Q15111 1095 aa8.68□□□□□ -1.02
NIPBL-205ENST00000505998 MRM1Q6IN84 353 aaKnown RBP8.68□□□□□ -1.02
NIPBL-205ENST00000505998 FIBCD1Q8N539 461 aa8.68□□□□□ -1.02
NIPBL-205ENST00000505998 ADCY4Q8NFM4 1077 aa8.68□□□□□ -1.02
NIPBL-205ENST00000505998 NOL6Q9H6R4 1146 aaKnown RBP8.68□□□□□ -1.02
NIPBL-205ENST00000505998 SIRPGQ9P1W8 387 aa8.68□□□□□ -1.02
NIPBL-205ENST00000505998 SUSD2Q9UGT4 822 aa8.68□□□□□ -1.02
NIPBL-205ENST00000505998 PCDHA11Q9Y5I1 949 aa8.68□□□□□ -1.02
NIPBL-205ENST00000505998 SUSD5O60279 629 aa8.67□□□□□ -1.02
NIPBL-205ENST00000505998 GSNP06396 782 aa8.67□□□□□ -1.02
NIPBL-205ENST00000505998 GP2P55259 537 aaKnown RBP8.67□□□□□ -1.02
NIPBL-205ENST00000505998 PCBP3P57721 371 aaKnown RBP8.67□□□□□ -1.02
NIPBL-205ENST00000505998 CWF19L1Q69YN2 538 aaKnown RBP8.67□□□□□ -1.02
NIPBL-205ENST00000505998 EEPD1Q7L9B9 569 aa8.67□□□□□ -1.02
NIPBL-205ENST00000505998 NBPF11Q86T75 865 aa8.67□□□□□ -1.02
NIPBL-205ENST00000505998 PI4K2BQ8TCG2 481 aa8.67□□□□□ -1.02
NIPBL-205ENST00000505998 DIS3Q9Y2L1 958 aaKnown RBP8.67□□□□□ -1.02
NIPBL-205ENST00000505998 SF3B6Q9Y3B4 125 aaKnown RBP8.67□□□□□ -1.02
NIPBL-205ENST00000505998 SYPP08247 313 aa8.66□□□□□ -1.02
NIPBL-205ENST00000505998 PPP2R5DQ14738 602 aa8.66□□□□□ -1.02
NIPBL-205ENST00000505998 CRTC3Q6UUV7 619 aa8.66□□□□□ -1.02
NIPBL-205ENST00000505998 Q8N3U1 123 aa8.66□□□□□ -1.02
NIPBL-205ENST00000505998 USHBP1Q8N6Y0 703 aa8.66□□□□□ -1.02
NIPBL-205ENST00000505998 PPP1R14AQ96A00 147 aa8.66□□□□□ -1.02
NIPBL-205ENST00000505998 FOXP3Q9BZS1 431 aa8.66□□□□□ -1.02
NIPBL-205ENST00000505998 TCFL5Q9UL49 500 aa8.66□□□□□ -1.02
NIPBL-205ENST00000505998 CCDC85CA6NKD9 419 aa8.65□□□□□ -1.02
NIPBL-205ENST00000505998 H0Y8X5 98 aa8.65□□□□□ -1.02
NIPBL-205ENST00000505998 CTSKP43235 329 aa8.65□□□□□ -1.02
NIPBL-205ENST00000505998 SV2CQ496J9 727 aa8.65□□□□□ -1.02
NIPBL-205ENST00000505998 SLC23A3Q6PIS1 610 aa8.65□□□□□ -1.02
NIPBL-205ENST00000505998 RNF111Q6ZNA4 994 aa8.65□□□□□ -1.02
NIPBL-205ENST00000505998 LINC00116Q8NCU8 138 aa8.65□□□□□ -1.02
NIPBL-205ENST00000505998 SYTL4Q96C24 671 aaPredicted RBP8.65□□□□□ -1.02
NIPBL-205ENST00000505998 ZDHHC15Q96MV8 337 aa8.65□□□□□ -1.02
NIPBL-205ENST00000505998 PRDM7Q9NQW5 492 aa8.65□□□□□ -1.02
NIPBL-205ENST00000505998 APEX2Q9UBZ4 518 aa8.65□□□□□ -1.02
NIPBL-205ENST00000505998 BMP8BP34820 402 aa8.64□□□□□ -1.03
NIPBL-205ENST00000505998 SERINC3Q13530 473 aa8.64□□□□□ -1.03
NIPBL-205ENST00000505998 CRACR2BQ8N4Y2 399 aaPredicted RBP8.64□□□□□ -1.03
NIPBL-205ENST00000505998 BVESQ8NE79 360 aa8.64□□□□□ -1.03
NIPBL-205ENST00000505998 RCC1LQ96I51 464 aaKnown RBP8.64□□□□□ -1.03
NIPBL-205ENST00000505998 ALPK1Q96QP1 1244 aa8.64□□□□□ -1.03
NIPBL-205ENST00000505998 EPN3Q9H201 632 aa8.64□□□□□ -1.03
NIPBL-205ENST00000505998 LRP2BPQ9P2M1 347 aa8.64□□□□□ -1.03
NIPBL-205ENST00000505998 CGGBP1Q9UFW8 167 aaPredicted RBP8.64□□□□□ -1.03
NIPBL-205ENST00000505998 AKT3Q9Y243 479 aa8.64□□□□□ -1.03
NIPBL-205ENST00000505998 MSRB2Q9Y3D2 182 aa8.64□□□□□ -1.03
NIPBL-205ENST00000505998 NOP56O00567 594 aaKnown RBP8.63□□□□□ -1.03
NIPBL-205ENST00000505998 POU4F1Q01851 419 aa8.63□□□□□ -1.03
NIPBL-205ENST00000505998 ABI1Q8IZP0 508 aa8.63□□□□□ -1.03
NIPBL-205ENST00000505998 ARHGEF39Q8N4T4 335 aa8.63□□□□□ -1.03
NIPBL-205ENST00000505998 ZNF513Q8N8E2 541 aaPredicted RBP8.63□□□□□ -1.03
NIPBL-205ENST00000505998 CCDC113Q9H0I3 377 aa8.63□□□□□ -1.03
NIPBL-205ENST00000505998 SLAMF8Q9P0V8 285 aa8.63□□□□□ -1.03
NIPBL-205ENST00000505998 AGRPO00253 132 aa8.62□□□□□ -1.03
NIPBL-205ENST00000505998 PDPK1O15530 556 aa8.62□□□□□ -1.03
NIPBL-205ENST00000505998 FKTNO75072 461 aa8.62□□□□□ -1.03
NIPBL-205ENST00000505998 VAV1P15498 845 aa8.62□□□□□ -1.03
NIPBL-205ENST00000505998 RPL10P27635 214 aaKnown RBP8.62□□□□□ -1.03
NIPBL-205ENST00000505998 NOP2P46087 812 aaKnown RBP8.62□□□□□ -1.03
NIPBL-205ENST00000505998 TEKQ02763 1124 aa8.62□□□□□ -1.03
NIPBL-205ENST00000505998 POMZP3Q6PJE2 187 aa8.62□□□□□ -1.03
NIPBL-205ENST00000505998 LRRN4CLQ8ND94 238 aa8.62□□□□□ -1.03
NIPBL-205ENST00000505998 OSBPL2Q9H1P3 480 aa8.62□□□□□ -1.03
NIPBL-205ENST00000505998 ZNF205O95201 554 aa8.61□□□□□ -1.03
NIPBL-205ENST00000505998 CD3EP07766 207 aa8.61□□□□□ -1.03
NIPBL-205ENST00000505998 AMPD2Q01433 879 aa8.61□□□□□ -1.03
NIPBL-205ENST00000505998 SLC10A6Q3KNW5 377 aa8.61□□□□□ -1.03
NIPBL-205ENST00000505998 ZNF792Q3KQV3 632 aa8.61□□□□□ -1.03
NIPBL-205ENST00000505998 WAPLQ7Z5K2 1190 aa8.61□□□□□ -1.03
NIPBL-205ENST00000505998 ST13P5Q8NFI4 369 aaPredicted RBP8.61□□□□□ -1.03
NIPBL-205ENST00000505998 MKL1Q969V6 931 aa8.61□□□□□ -1.03
NIPBL-205ENST00000505998 CCDC120Q96HB5 630 aa8.61□□□□□ -1.03
NIPBL-205ENST00000505998 MBNL3Q9NUK0 354 aaKnown RBP8.61□□□□□ -1.03
NIPBL-205ENST00000505998 ADAMTS6Q9UKP5 1117 aa8.61□□□□□ -1.03
NIPBL-205ENST00000505998 EMC9Q9Y3B6 208 aa8.61□□□□□ -1.03
NIPBL-205ENST00000505998 OAS3Q9Y6K5 1087 aaKnown RBP8.61□□□□□ -1.03
NIPBL-205ENST00000505998 DNAJC25-GNG10A0A024R161 153 aa8.6□□□□□ -1.03
NIPBL-205ENST00000505998 VAMP4O75379 141 aa8.6□□□□□ -1.03
NIPBL-205ENST00000505998 RNASE1P07998 156 aaKnown RBP8.6□□□□□ -1.03
NIPBL-205ENST00000505998 ENDOUP21128 410 aaKnown RBP8.6□□□□□ -1.03
NIPBL-205ENST00000505998 GRB10Q13322 594 aa8.6□□□□□ -1.03
NIPBL-205ENST00000505998 RASGRF1Q13972 1273 aa8.6□□□□□ -1.03
NIPBL-205ENST00000505998 RALGPS1Q5JS13 557 aa8.6□□□□□ -1.03
NIPBL-205ENST00000505998 DEPDC7Q96QD5 511 aa8.6□□□□□ -1.03
NIPBL-205ENST00000505998 SRPK1Q96SB4 655 aaKnown RBP8.6□□□□□ -1.03
NIPBL-205ENST00000505998 CDADC1Q9BWV3 514 aa8.6□□□□□ -1.03
NIPBL-205ENST00000505998 LNPKQ9C0E8 428 aa8.6□□□□□ -1.03
NIPBL-205ENST00000505998 RC3H2Q9HBD1 1191 aaKnown RBP8.6□□□□□ -1.03
NIPBL-205ENST00000505998 ZMYM5Q9UJ78 669 aa8.6□□□□□ -1.03
NIPBL-205ENST00000505998 TMEM59LQ9UK28 342 aa8.6□□□□□ -1.03
NIPBL-205ENST00000505998 KCNH1O95259 989 aa8.59□□□□□ -1.03
NIPBL-205ENST00000505998 ITGAVP06756 1048 aa8.59□□□□□ -1.03
NIPBL-205ENST00000505998 DPY19L1Q2PZI1 675 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms