RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 SUSD2Q9UGT4 822 aa8.98□□□□□ -0.97
NIPBL-203ENST00000503274 PPM1BO75688 479 aa8.97□□□□□ -0.97
NIPBL-203ENST00000503274 NAT2P11245 290 aa8.97□□□□□ -0.97
NIPBL-203ENST00000503274 RANGAP1P46060 587 aaPredicted RBP8.97□□□□□ -0.97
NIPBL-203ENST00000503274 ZNF143P52747 638 aaPredicted RBP8.97□□□□□ -0.97
NIPBL-203ENST00000503274 PCBP3P57721 371 aaKnown RBP8.97□□□□□ -0.97
NIPBL-203ENST00000503274 DDR2Q16832 855 aa8.97□□□□□ -0.97
NIPBL-203ENST00000503274 NBPF6Q5VWK0 638 aa8.97□□□□□ -0.97
NIPBL-203ENST00000503274 RNF111Q6ZNA4 994 aa8.97□□□□□ -0.97
NIPBL-203ENST00000503274 LINC00116Q8NCU8 138 aa8.97□□□□□ -0.97
NIPBL-203ENST00000503274 NBPF4Q96M43 638 aa8.97□□□□□ -0.97
NIPBL-203ENST00000503274 APBA2Q99767 749 aa8.97□□□□□ -0.97
NIPBL-203ENST00000503274 ADAMTS6Q9UKP5 1117 aa8.97□□□□□ -0.97
NIPBL-203ENST00000503274 SSU72P8A0A1W2PR75 194 aa8.96□□□□□ -0.98
NIPBL-203ENST00000503274 U2SURPO15042 1029 aaKnown RBP8.96□□□□□ -0.98
NIPBL-203ENST00000503274 GJB6O95452 261 aa8.96□□□□□ -0.98
NIPBL-203ENST00000503274 GSNP06396 782 aa8.96□□□□□ -0.98
NIPBL-203ENST00000503274 CTSKP43235 329 aa8.96□□□□□ -0.98
NIPBL-203ENST00000503274 ZNF792Q3KQV3 632 aa8.96□□□□□ -0.98
NIPBL-203ENST00000503274 FIBCD1Q8N539 461 aa8.96□□□□□ -0.98
NIPBL-203ENST00000503274 FOXP3Q9BZS1 431 aa8.96□□□□□ -0.98
NIPBL-203ENST00000503274 MBNL3Q9NUK0 354 aaKnown RBP8.96□□□□□ -0.98
NIPBL-203ENST00000503274 TCFL5Q9UL49 500 aa8.96□□□□□ -0.98
NIPBL-203ENST00000503274 DIS3Q9Y2L1 958 aaKnown RBP8.96□□□□□ -0.98
NIPBL-203ENST00000503274 RNASE1P07998 156 aaKnown RBP8.95□□□□□ -0.98
NIPBL-203ENST00000503274 SYPP08247 313 aa8.95□□□□□ -0.98
NIPBL-203ENST00000503274 CWF19L1Q69YN2 538 aaKnown RBP8.95□□□□□ -0.98
NIPBL-203ENST00000503274 ADCY4Q8NFM4 1077 aa8.95□□□□□ -0.98
NIPBL-203ENST00000503274 ALPK1Q96QP1 1244 aa8.95□□□□□ -0.98
NIPBL-203ENST00000503274 NOL6Q9H6R4 1146 aaKnown RBP8.95□□□□□ -0.98
NIPBL-203ENST00000503274 SLAMF8Q9P0V8 285 aa8.95□□□□□ -0.98
NIPBL-203ENST00000503274 SUGT1Q9Y2Z0 365 aa8.95□□□□□ -0.98
NIPBL-203ENST00000503274 SF3B6Q9Y3B4 125 aaKnown RBP8.95□□□□□ -0.98
NIPBL-203ENST00000503274 H0Y8X5 98 aa8.94□□□□□ -0.98
NIPBL-203ENST00000503274 BMP8BP34820 402 aa8.94□□□□□ -0.98
NIPBL-203ENST00000503274 TEKQ02763 1124 aa8.94□□□□□ -0.98
NIPBL-203ENST00000503274 SOGA3Q5TF21 947 aa8.94□□□□□ -0.98
NIPBL-203ENST00000503274 MRM1Q6IN84 353 aaKnown RBP8.94□□□□□ -0.98
NIPBL-203ENST00000503274 CRTC3Q6UUV7 619 aa8.94□□□□□ -0.98
NIPBL-203ENST00000503274 SYTL4Q96C24 671 aaPredicted RBP8.94□□□□□ -0.98
NIPBL-203ENST00000503274 RCC1LQ96I51 464 aaKnown RBP8.94□□□□□ -0.98
NIPBL-203ENST00000503274 SUSD5O60279 629 aa8.93□□□□□ -0.98
NIPBL-203ENST00000503274 PPP2R5DQ14738 602 aa8.93□□□□□ -0.98
NIPBL-203ENST00000503274 EEPD1Q7L9B9 569 aa8.93□□□□□ -0.98
NIPBL-203ENST00000503274 ARHGEF39Q8N4T4 335 aa8.93□□□□□ -0.98
NIPBL-203ENST00000503274 CCDC120Q96HB5 630 aa8.93□□□□□ -0.98
NIPBL-203ENST00000503274 RC3H2Q9HBD1 1191 aaKnown RBP8.93□□□□□ -0.98
NIPBL-203ENST00000503274 APEX2Q9UBZ4 518 aa8.93□□□□□ -0.98
NIPBL-203ENST00000503274 DNAJC25-GNG10A0A024R161 153 aa8.92□□□□□ -0.98
NIPBL-203ENST00000503274 VAV1P15498 845 aa8.92□□□□□ -0.98
NIPBL-203ENST00000503274 RALGPS1Q5JS13 557 aa8.92□□□□□ -0.98
NIPBL-203ENST00000503274 ZNF513Q8N8E2 541 aaPredicted RBP8.92□□□□□ -0.98
NIPBL-203ENST00000503274 ZDHHC15Q96MV8 337 aa8.92□□□□□ -0.98
NIPBL-203ENST00000503274 ADAMTS10Q9H324 1103 aa8.92□□□□□ -0.98
NIPBL-203ENST00000503274 SIRPGQ9P1W8 387 aa8.92□□□□□ -0.98
NIPBL-203ENST00000503274 ADGRE2Q9UHX3 823 aa8.92□□□□□ -0.98
NIPBL-203ENST00000503274 ZNF281Q9Y2X9 895 aa8.92□□□□□ -0.98
NIPBL-203ENST00000503274 FKTNO75072 461 aa8.91□□□□□ -0.98
NIPBL-203ENST00000503274 ZNF205O95201 554 aa8.91□□□□□ -0.98
NIPBL-203ENST00000503274 RPL10P27635 214 aaKnown RBP8.91□□□□□ -0.98
NIPBL-203ENST00000503274 POU4F1Q01851 419 aa8.91□□□□□ -0.98
NIPBL-203ENST00000503274 CBLL1Q75N03 491 aa8.91□□□□□ -0.98
NIPBL-203ENST00000503274 LRRN4CLQ8ND94 238 aa8.91□□□□□ -0.98
NIPBL-203ENST00000503274 BVESQ8NE79 360 aa8.91□□□□□ -0.98
NIPBL-203ENST00000503274 PMFBP1Q8TBY8 1022 aa8.91□□□□□ -0.98
NIPBL-203ENST00000503274 UBXN4Q92575 508 aa8.91□□□□□ -0.98
NIPBL-203ENST00000503274 DNAJC2Q99543 621 aaKnown RBP8.91□□□□□ -0.98
NIPBL-203ENST00000503274 CGGBP1Q9UFW8 167 aaPredicted RBP8.91□□□□□ -0.98
NIPBL-203ENST00000503274 TMEM59LQ9UK28 342 aa8.91□□□□□ -0.98
NIPBL-203ENST00000503274 AKT3Q9Y243 479 aa8.91□□□□□ -0.98
NIPBL-203ENST00000503274 NOP56O00567 594 aaKnown RBP8.9□□□□□ -0.98
NIPBL-203ENST00000503274 ENDOUP21128 410 aaKnown RBP8.9□□□□□ -0.98
NIPBL-203ENST00000503274 NOP2P46087 812 aaKnown RBP8.9□□□□□ -0.98
NIPBL-203ENST00000503274 SV2CQ496J9 727 aa8.9□□□□□ -0.98
NIPBL-203ENST00000503274 WAPLQ7Z5K2 1190 aa8.9□□□□□ -0.98
NIPBL-203ENST00000503274 PPP1R14AQ96A00 147 aa8.9□□□□□ -0.98
NIPBL-203ENST00000503274 EPN3Q9H201 632 aa8.9□□□□□ -0.98
NIPBL-203ENST00000503274 TMEM82A0PJX8 343 aa8.89□□□□□ -0.99
NIPBL-203ENST00000503274 GDNFP39905 211 aa8.89□□□□□ -0.99
NIPBL-203ENST00000503274 SERINC3Q13530 473 aa8.89□□□□□ -0.99
NIPBL-203ENST00000503274 MCTP1Q6DN14 999 aa8.89□□□□□ -0.99
NIPBL-203ENST00000503274 POMZP3Q6PJE2 187 aa8.89□□□□□ -0.99
NIPBL-203ENST00000503274 CRACR2BQ8N4Y2 399 aaPredicted RBP8.89□□□□□ -0.99
NIPBL-203ENST00000503274 SLC12A9Q9BXP2 914 aa8.89□□□□□ -0.99
NIPBL-203ENST00000503274 ZMYM5Q9UJ78 669 aa8.89□□□□□ -0.99
NIPBL-203ENST00000503274 CTNND2Q9UQB3 1225 aa8.89□□□□□ -0.99
NIPBL-203ENST00000503274 EMC9Q9Y3B6 208 aa8.89□□□□□ -0.99
NIPBL-203ENST00000503274 MSRB2Q9Y3D2 182 aa8.89□□□□□ -0.99
NIPBL-203ENST00000503274 BTBD11A6QL63 1104 aa8.88□□□□□ -0.99
NIPBL-203ENST00000503274 VAMP4O75379 141 aa8.88□□□□□ -0.99
NIPBL-203ENST00000503274 CD3EP07766 207 aa8.88□□□□□ -0.99
NIPBL-203ENST00000503274 ZGLP1P0C6A0 271 aa8.88□□□□□ -0.99
NIPBL-203ENST00000503274 IRAK1P51617 712 aa8.88□□□□□ -0.99
NIPBL-203ENST00000503274 HK2P52789 917 aa8.88□□□□□ -0.99
NIPBL-203ENST00000503274 DUSP4Q13115 394 aa8.88□□□□□ -0.99
NIPBL-203ENST00000503274 GRB10Q13322 594 aa8.88□□□□□ -0.99
NIPBL-203ENST00000503274 CDADC1Q9BWV3 514 aa8.88□□□□□ -0.99
NIPBL-203ENST00000503274 CCDC113Q9H0I3 377 aa8.88□□□□□ -0.99
NIPBL-203ENST00000503274 GOLGA2P5Q9HBQ8 144 aa8.88□□□□□ -0.99
NIPBL-203ENST00000503274 C19orf73Q9NVV2 129 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms