RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 TBX2Q13207 712 aaPredicted RBP3.07□□□□□ -1.92
MDC1-208ENST00000494654 NNTQ13423 1086 aa3.07□□□□□ -1.92
MDC1-208ENST00000494654 NAA25Q14CX7 972 aa3.07□□□□□ -1.92
MDC1-208ENST00000494654 NCAPHQ15003 741 aa3.07□□□□□ -1.92
MDC1-208ENST00000494654 ME3Q16798 604 aa3.07□□□□□ -1.92
MDC1-208ENST00000494654 AMOTQ4VCS5 1084 aa3.07□□□□□ -1.92
MDC1-208ENST00000494654 CMPK2Q5EBM0 449 aa3.07□□□□□ -1.92
MDC1-208ENST00000494654 LARP1BQ659C4 914 aaKnown RBP3.07□□□□□ -1.92
MDC1-208ENST00000494654 CWF19L1Q69YN2 538 aaKnown RBP3.07□□□□□ -1.92
MDC1-208ENST00000494654 CC2D2BQ6DHV5 1058 aa3.07□□□□□ -1.92
MDC1-208ENST00000494654 CYB5D1Q6P9G0 228 aa3.07□□□□□ -1.92
MDC1-208ENST00000494654 KDM7AQ6ZMT4 941 aa3.07□□□□□ -1.92
MDC1-208ENST00000494654 TSHZ1Q6ZSZ6 1077 aa3.07□□□□□ -1.92
MDC1-208ENST00000494654 ARMC9Q7Z3E5 817 aa3.07□□□□□ -1.92
MDC1-208ENST00000494654 SPATA21Q7Z572 469 aa3.07□□□□□ -1.92
MDC1-208ENST00000494654 SDCCAG8Q86SQ7 713 aaPredicted RBP3.07□□□□□ -1.92
MDC1-208ENST00000494654 CTAGE6Q86UF2 777 aa3.07□□□□□ -1.92
MDC1-208ENST00000494654 TRIM74Q86UV6 250 aa3.07□□□□□ -1.92
MDC1-208ENST00000494654 TRIM73Q86UV7 250 aa3.07□□□□□ -1.92
MDC1-208ENST00000494654 BPHLQ86WA6 291 aaPredicted RBP3.07□□□□□ -1.92
MDC1-208ENST00000494654 PROSER2Q86WR7 435 aaPredicted RBP3.07□□□□□ -1.92
MDC1-208ENST00000494654 NCAPG2Q86XI2 1143 aa3.07□□□□□ -1.92
MDC1-208ENST00000494654 CTAGE4Q8IX94 777 aa3.07□□□□□ -1.92
MDC1-208ENST00000494654 CCDC13Q8IYE1 715 aa3.07□□□□□ -1.92
MDC1-208ENST00000494654 RPUSD2Q8IZ73 545 aaKnown RBP3.07□□□□□ -1.92
MDC1-208ENST00000494654 CNTROBQ8N137 903 aa3.07□□□□□ -1.92
MDC1-208ENST00000494654 ENGASEQ8NFI3 743 aa3.07□□□□□ -1.92
MDC1-208ENST00000494654 SNIP1Q8TAD8 396 aaKnown RBP3.07□□□□□ -1.92
MDC1-208ENST00000494654 COG1Q8WTW3 980 aa3.07□□□□□ -1.92
MDC1-208ENST00000494654 LMBR1Q8WVP7 490 aa3.07□□□□□ -1.92
MDC1-208ENST00000494654 MRPS27Q92552 414 aaKnown RBP3.07□□□□□ -1.92
MDC1-208ENST00000494654 CNKSR1Q969H4 720 aa3.07□□□□□ -1.92
MDC1-208ENST00000494654 ITPKCQ96DU7 683 aa3.07□□□□□ -1.92
MDC1-208ENST00000494654 SAAL1Q96ER3 474 aa3.07□□□□□ -1.92
MDC1-208ENST00000494654 THOC1Q96FV9 657 aaKnown RBP3.07□□□□□ -1.92
MDC1-208ENST00000494654 ANKRD27Q96NW4 1050 aa3.07□□□□□ -1.92
MDC1-208ENST00000494654 WDR24Q96S15 920 aa3.07□□□□□ -1.92
MDC1-208ENST00000494654 MEIS3Q99687 375 aa3.07□□□□□ -1.92
MDC1-208ENST00000494654 KLF16Q9BXK1 252 aaPredicted RBP3.07□□□□□ -1.92
MDC1-208ENST00000494654 IL25Q9H293 177 aa3.07□□□□□ -1.92
MDC1-208ENST00000494654 EPC1Q9H2F5 836 aa3.07□□□□□ -1.92
MDC1-208ENST00000494654 GOLPH3LQ9H4A5 285 aa3.07□□□□□ -1.92
MDC1-208ENST00000494654 SLC40A1Q9NP59 571 aa3.07□□□□□ -1.92
MDC1-208ENST00000494654 AAASQ9NRG9 546 aa3.07□□□□□ -1.92
MDC1-208ENST00000494654 MBIPQ9NS73 344 aa3.07□□□□□ -1.92
MDC1-208ENST00000494654 DDX20Q9UHI6 824 aaKnown RBP3.07□□□□□ -1.92
MDC1-208ENST00000494654 CFAP45Q9UL16 551 aa3.07□□□□□ -1.92
MDC1-208ENST00000494654 CORO1CQ9ULV4 474 aaPredicted RBP3.07□□□□□ -1.92
MDC1-208ENST00000494654 TTF2Q9UNY4 1162 aaKnown RBP3.07□□□□□ -1.92
MDC1-208ENST00000494654 PCDHB9Q9Y5E1 797 aa3.07□□□□□ -1.92
MDC1-208ENST00000494654 NDUFB9Q9Y6M9 179 aa3.07□□□□□ -1.92
MDC1-208ENST00000494654 AFF2P51816 1311 aa3.07□□□□□ -1.92
MDC1-208ENST00000494654 UBN2Q6ZU65 1347 aa3.07□□□□□ -1.92
MDC1-208ENST00000494654 TMEM94Q12767 1356 aa3.07□□□□□ -1.92
MDC1-208ENST00000494654 ABCC12Q96J65 1359 aa3.07□□□□□ -1.92
MDC1-208ENST00000494654 MST1RQ04912 1400 aa3.07□□□□□ -1.92
MDC1-208ENST00000494654 EDC4Q6P2E9 1401 aaKnown RBP3.07□□□□□ -1.92
MDC1-208ENST00000494654 ARHGAP23Q9P227 1491 aa3.07□□□□□ -1.92
MDC1-208ENST00000494654 SLIT3O75094 1523 aa3.07□□□□□ -1.92
MDC1-208ENST00000494654 NFAT5O94916 1531 aa3.07□□□□□ -1.92
MDC1-208ENST00000494654 ARFGEF1Q9Y6D6 1849 aa3.07□□□□□ -1.92
MDC1-208ENST00000494654 TAF1P21675 1872 aa3.07□□□□□ -1.92
MDC1-208ENST00000494654 NDUFAB1O14561 156 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 ZSCAN9O15535 394 aaPredicted RBP3.06□□□□□ -1.92
MDC1-208ENST00000494654 KIF5CO60282 957 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 PPFIA3O75145 1194 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 RAB11FIP3O75154 756 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 CDKL5O76039 1030 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 SASH1O94885 1247 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 RTN3O95197 1032 aaPredicted RBP3.06□□□□□ -1.92
MDC1-208ENST00000494654 GSTA1P08263 222 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 TOP1P11387 765 aaKnown RBP3.06□□□□□ -1.92
MDC1-208ENST00000494654 TIMP2P16035 220 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 FERP16591 822 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 ATP5JP18859 108 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 PSMA5P28066 241 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 GBP2P32456 591 aaPredicted RBP3.06□□□□□ -1.92
MDC1-208ENST00000494654 ABCD1P33897 745 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 CCT4P50991 539 aaKnown RBP3.06□□□□□ -1.92
MDC1-208ENST00000494654 IRAK1P51617 712 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 USP14P54578 494 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 CRB1P82279 1406 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 AMPD2Q01433 879 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 ROR2Q01974 943 aaKnown RBP3.06□□□□□ -1.92
MDC1-208ENST00000494654 MYL5Q02045 173 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 LMNB2Q03252 620 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 SFSWAPQ12872 951 aaKnown RBP3.06□□□□□ -1.92
MDC1-208ENST00000494654 XRCC4Q13426 336 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 STIM1Q13586 685 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 TBC1D25Q3MII6 688 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 DPCR1Q3MIW9 517 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 LACTB2Q53H82 288 aaPredicted RBP3.06□□□□□ -1.92
MDC1-208ENST00000494654 INTS6LQ5JSJ4 861 aaKnown RBP3.06□□□□□ -1.92
MDC1-208ENST00000494654 NBPF14Q5TI25 921 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 FOCADQ5VW36 1801 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 NAA35Q5VZE5 725 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 NAA16Q6N069 864 aaPredicted RBP3.06□□□□□ -1.92
MDC1-208ENST00000494654 PRPF40BQ6NWY9 871 aaKnown RBP3.06□□□□□ -1.92
MDC1-208ENST00000494654 MIS18BP1Q6P0N0 1132 aa3.06□□□□□ -1.92
MDC1-208ENST00000494654 C6orf89Q6UWU4 347 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms