RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.68□□□□□ -1.02
COL4A5-205ENST00000483338 PDE2AO00408 941 aaPredicted RBP8.68□□□□□ -1.02
COL4A5-205ENST00000483338 TRAPPC3O43617 180 aa8.68□□□□□ -1.02
COL4A5-205ENST00000483338 ATP1A1P05023 1023 aaKnown RBP8.68□□□□□ -1.02
COL4A5-205ENST00000483338 PDHA1P08559 390 aa8.68□□□□□ -1.02
COL4A5-205ENST00000483338 FAM200BP0CF97 657 aa8.68□□□□□ -1.02
COL4A5-205ENST00000483338 VCAM1P19320 739 aa8.68□□□□□ -1.02
COL4A5-205ENST00000483338 SP100P23497 879 aaPredicted RBP8.68□□□□□ -1.02
COL4A5-205ENST00000483338 ESCO1Q5FWF5 840 aa8.68□□□□□ -1.02
COL4A5-205ENST00000483338 FKBP15Q5T1M5 1219 aa8.68□□□□□ -1.02
COL4A5-205ENST00000483338 OLFML1Q6UWY5 402 aa8.68□□□□□ -1.02
COL4A5-205ENST00000483338 SLF2Q8IX21 1173 aa8.68□□□□□ -1.02
COL4A5-205ENST00000483338 SMCR8Q8TEV9 937 aaPredicted RBP8.68□□□□□ -1.02
COL4A5-205ENST00000483338 RPS6KC1Q96S38 1066 aa8.68□□□□□ -1.02
COL4A5-205ENST00000483338 SEC62Q99442 399 aaKnown RBP8.68□□□□□ -1.02
COL4A5-205ENST00000483338 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.68□□□□□ -1.025e-7■■□□□ 12.6
COL4A5-205ENST00000483338 IL1RAPL2Q9NP60 686 aa8.68□□□□□ -1.02
COL4A5-205ENST00000483338 UTP6Q9NYH9 597 aaKnown RBP8.68□□□□□ -1.02
COL4A5-205ENST00000483338 DMGDHQ9UI17 866 aaKnown RBP8.68□□□□□ -1.02
COL4A5-205ENST00000483338 MYH7P12883 1935 aa8.68□□□□□ -1.02
COL4A5-205ENST00000483338 ADAMTSL3P82987 1691 aa8.68□□□□□ -1.02
COL4A5-205ENST00000483338 PNMA6EA0A0J9YXQ4 647 aa8.68□□□□□ -1.02
COL4A5-205ENST00000483338 A0A1W2PQ27 194 aa8.68□□□□□ -1.02
COL4A5-205ENST00000483338 A0A1W2PQ64 194 aa8.68□□□□□ -1.02
COL4A5-205ENST00000483338 A0A1W2PQD8 194 aa8.68□□□□□ -1.02
COL4A5-205ENST00000483338 SLC27A2O14975 620 aa8.68□□□□□ -1.02
COL4A5-205ENST00000483338 ADCY1Q08828 1119 aa8.68□□□□□ -1.02
COL4A5-205ENST00000483338 NEXNQ0ZGT2 675 aa8.68□□□□□ -1.02
COL4A5-205ENST00000483338 C16orf87Q6PH81 154 aa8.68□□□□□ -1.02
COL4A5-205ENST00000483338 GET4Q7L5D6 327 aaPredicted RBP8.68□□□□□ -1.02
COL4A5-205ENST00000483338 ILDR1Q86SU0 546 aaPredicted RBP8.68□□□□□ -1.02
COL4A5-205ENST00000483338 HOOK3Q86VS8 718 aa8.68□□□□□ -1.02
COL4A5-205ENST00000483338 RNF168Q8IYW5 571 aaPredicted RBP8.68□□□□□ -1.02
COL4A5-205ENST00000483338 LINS1Q8NG48 757 aa8.68□□□□□ -1.02
COL4A5-205ENST00000483338 FGD4Q96M96 766 aa8.68□□□□□ -1.02
COL4A5-205ENST00000483338 SLF1Q9BQI6 1058 aa8.68□□□□□ -1.02
COL4A5-205ENST00000483338 NAA15Q9BXJ9 866 aaKnown RBP8.68□□□□□ -1.02
COL4A5-205ENST00000483338 C19orf44Q9H6X5 657 aa8.68□□□□□ -1.02
COL4A5-205ENST00000483338 CABP1Q9NZU7 370 aa8.68□□□□□ -1.02
COL4A5-205ENST00000483338 LRRC7Q96NW7 1537 aa8.67□□□□□ -1.02
COL4A5-205ENST00000483338 ZNF335Q9H4Z2 1342 aaPredicted RBP8.67□□□□□ -1.02
COL4A5-205ENST00000483338 ALOX15P16050 662 aaPredicted RBP8.67□□□□□ -1.02
COL4A5-205ENST00000483338 ATP2A2P16615 1042 aaKnown RBP8.67□□□□□ -1.02
COL4A5-205ENST00000483338 RFC5P40937 340 aa8.67□□□□□ -1.02
COL4A5-205ENST00000483338 PLOD1Q02809 727 aaPredicted RBP8.67□□□□□ -1.02
COL4A5-205ENST00000483338 C2orf54Q08AI8 447 aa8.67□□□□□ -1.02
COL4A5-205ENST00000483338 GLE1Q53GS7 698 aaKnown RBP8.67□□□□□ -1.02
COL4A5-205ENST00000483338 CPLX3Q8WVH0 158 aa8.67□□□□□ -1.02
COL4A5-205ENST00000483338 DMAP1Q9NPF5 467 aaPredicted RBP8.67□□□□□ -1.02
COL4A5-205ENST00000483338 TRIM10Q9UDY6 481 aa8.67□□□□□ -1.02
COL4A5-205ENST00000483338 TMCO1Q9UM00 188 aa8.67□□□□□ -1.02
COL4A5-205ENST00000483338 A8MUI8 341 aa8.67□□□□□ -1.02
COL4A5-205ENST00000483338 CA8P35219 290 aa8.67□□□□□ -1.02
COL4A5-205ENST00000483338 MRPS25P82663 173 aaKnown RBP8.67□□□□□ -1.02
COL4A5-205ENST00000483338 RBL2Q08999 1139 aa8.67□□□□□ -1.02
COL4A5-205ENST00000483338 LONRF3Q496Y0 759 aa8.67□□□□□ -1.02
COL4A5-205ENST00000483338 OR52E8Q6IFG1 317 aa8.67□□□□□ -1.02
COL4A5-205ENST00000483338 TMEM154Q6P9G4 183 aa8.67□□□□□ -1.02
COL4A5-205ENST00000483338 BICDL1Q6ZP65 573 aa8.67□□□□□ -1.02
COL4A5-205ENST00000483338 EXOC3L1Q86VI1 746 aa8.67□□□□□ -1.02
COL4A5-205ENST00000483338 IQCKQ8N0W5 287 aa8.67□□□□□ -1.02
COL4A5-205ENST00000483338 MLKLQ8NB16 471 aa8.67□□□□□ -1.02
COL4A5-205ENST00000483338 RPGRIP1Q96KN7 1286 aa8.67□□□□□ -1.02
COL4A5-205ENST00000483338 BARX2Q9UMQ3 279 aaPredicted RBP8.67□□□□□ -1.02
COL4A5-205ENST00000483338 CEP170BQ9Y4F5 1589 aaPredicted RBP8.67□□□□□ -1.02
COL4A5-205ENST00000483338 SAR1BQ9Y6B6 198 aa8.67□□□□□ -1.02
COL4A5-205ENST00000483338 WASLO00401 505 aaPredicted RBP8.67□□□□□ -1.02
COL4A5-205ENST00000483338 TRIM37O94972 964 aa8.67□□□□□ -1.02
COL4A5-205ENST00000483338 ZKSCAN1P17029 563 aaPredicted RBP8.67□□□□□ -1.02
COL4A5-205ENST00000483338 EPHB4P54760 987 aa8.67□□□□□ -1.02
COL4A5-205ENST00000483338 KCNJ2P63252 427 aa8.67□□□□□ -1.02
COL4A5-205ENST00000483338 CREB3L3Q68CJ9 461 aa8.67□□□□□ -1.02
COL4A5-205ENST00000483338 SLC15A3Q8IY34 581 aa8.67□□□□□ -1.02
COL4A5-205ENST00000483338 ZBTB8BQ8NAP8 495 aaPredicted RBP8.67□□□□□ -1.02
COL4A5-205ENST00000483338 DYDC1Q8WWB3 177 aa8.67□□□□□ -1.02
COL4A5-205ENST00000483338 TEKT1Q969V4 418 aa8.67□□□□□ -1.02
COL4A5-205ENST00000483338 NUDT16Q96DE0 195 aaKnown RBP8.67□□□□□ -1.02
COL4A5-205ENST00000483338 LTV1Q96GA3 475 aaPredicted RBP8.67□□□□□ -1.02
COL4A5-205ENST00000483338 OXCT2Q9BYC2 517 aaPredicted RBP8.67□□□□□ -1.02
COL4A5-205ENST00000483338 TUBE1Q9UJT0 475 aa8.67□□□□□ -1.02
COL4A5-205ENST00000483338 TAF6LQ9Y6J9 622 aa8.67□□□□□ -1.02
COL4A5-205ENST00000483338 MYH13Q9UKX3 1938 aa8.67□□□□□ -1.02
COL4A5-205ENST00000483338 PNPLA6Q8IY17 1366 aa8.67□□□□□ -1.02
COL4A5-205ENST00000483338 CEMIPQ8WUJ3 1361 aa8.67□□□□□ -1.02
COL4A5-205ENST00000483338 ZFYVE9O95405 1425 aa8.66□□□□□ -1.02
COL4A5-205ENST00000483338 CCT8L1PA6NM43 557 aa8.66□□□□□ -1.02
COL4A5-205ENST00000483338 IPO5O00410 1097 aaKnown RBP8.66□□□□□ -1.02
COL4A5-205ENST00000483338 ZNF185O15231 689 aa8.66□□□□□ -1.02
COL4A5-205ENST00000483338 CDC27P30260 824 aa8.66□□□□□ -1.02
COL4A5-205ENST00000483338 HPDP32754 393 aaPredicted RBP8.66□□□□□ -1.02
COL4A5-205ENST00000483338 USP46P62068 366 aa8.66□□□□□ -1.02
COL4A5-205ENST00000483338 PDE4BQ07343 736 aa8.66□□□□□ -1.02
COL4A5-205ENST00000483338 TMED1Q13445 227 aa8.66□□□□□ -1.02
COL4A5-205ENST00000483338 PI16Q6UXB8 463 aa8.66□□□□□ -1.02
COL4A5-205ENST00000483338 EXOC8Q8IYI6 725 aa8.66□□□□□ -1.02
COL4A5-205ENST00000483338 FNBP4Q8N3X1 1017 aaPredicted RBP8.66□□□□□ -1.02
COL4A5-205ENST00000483338 ATP11CQ8NB49 1132 aa8.66□□□□□ -1.02
COL4A5-205ENST00000483338 ATP6V1G3Q96LB4 118 aa8.66□□□□□ -1.02
COL4A5-205ENST00000483338 IWS1Q96ST2 819 aa8.66□□□□□ -1.02
COL4A5-205ENST00000483338 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.66□□□□□ -1.022e-6■■■■■ 39.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms