RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.61□□□□□ -0.87
HPS4-209ENST00000466781 SORBS3O60504 671 aa9.61□□□□□ -0.87
HPS4-209ENST00000466781 FAM160A1Q05DH4 1040 aa9.61□□□□□ -0.87
HPS4-209ENST00000466781 ERFEQ4G0M1 354 aa9.61□□□□□ -0.87
HPS4-209ENST00000466781 MFSD14BQ5SR56 506 aa9.61□□□□□ -0.87
HPS4-209ENST00000466781 BEND3Q5T5X7 828 aa9.61□□□□□ -0.87
HPS4-209ENST00000466781 BSPRYQ5W0U4 402 aa9.61□□□□□ -0.87
HPS4-209ENST00000466781 NCAPG2Q86XI2 1143 aa9.61□□□□□ -0.87
HPS4-209ENST00000466781 MCUR1Q96AQ8 359 aa9.61□□□□□ -0.87
HPS4-209ENST00000466781 KCNH3Q9ULD8 1083 aa9.61□□□□□ -0.87
HPS4-209ENST00000466781 ANGEL1Q9UNK9 670 aaKnown RBP9.61□□□□□ -0.87
HPS4-209ENST00000466781 MAPK8IP1Q9UQF2 711 aa9.61□□□□□ -0.87
HPS4-209ENST00000466781 PNMA6EA0A0J9YXQ4 647 aa9.61□□□□□ -0.87
HPS4-209ENST00000466781 GOLGA8CPA6NN73 597 aa9.61□□□□□ -0.87
HPS4-209ENST00000466781 PRDM1O75626 825 aa9.61□□□□□ -0.87
HPS4-209ENST00000466781 DIXDC1Q155Q3 683 aa9.61□□□□□ -0.87
HPS4-209ENST00000466781 ARHGAP24Q8N264 748 aa9.61□□□□□ -0.87
HPS4-209ENST00000466781 SNX21Q969T3 373 aa9.61□□□□□ -0.87
HPS4-209ENST00000466781 XDHP47989 1333 aa9.6□□□□□ -0.87
HPS4-209ENST00000466781 POLR2DO15514 142 aaKnown RBP9.6□□□□□ -0.87
HPS4-209ENST00000466781 LIG4P49917 911 aa9.6□□□□□ -0.87
HPS4-209ENST00000466781 IWS1Q96ST2 819 aa9.6□□□□□ -0.87
HPS4-209ENST00000466781 MMS19Q96T76 1030 aa9.6□□□□□ -0.87
HPS4-209ENST00000466781 TRIM31Q9BZY9 425 aa9.6□□□□□ -0.87
HPS4-209ENST00000466781 RBSNQ9H1K0 784 aa9.6□□□□□ -0.87
HPS4-209ENST00000466781 FER1L4A9Z1Z3 1794 aa9.6□□□□□ -0.87
HPS4-209ENST00000466781 SLC27A2O14975 620 aa9.6□□□□□ -0.87
HPS4-209ENST00000466781 FLOT1O75955 427 aa9.6□□□□□ -0.87
HPS4-209ENST00000466781 TBC1D8O95759 1140 aa9.6□□□□□ -0.87
HPS4-209ENST00000466781 RPS6KA2Q15349 733 aa9.6□□□□□ -0.87
HPS4-209ENST00000466781 SFMBT2Q5VUG0 894 aa9.6□□□□□ -0.87
HPS4-209ENST00000466781 SESTD1Q86VW0 696 aa9.6□□□□□ -0.87
HPS4-209ENST00000466781 ARHGEF2Q92974 986 aaKnown RBP9.6□□□□□ -0.87
HPS4-209ENST00000466781 FAM227BQ96M60 508 aa9.6□□□□□ -0.87
HPS4-209ENST00000466781 ST7Q9NRC1 585 aa9.6□□□□□ -0.87
HPS4-209ENST00000466781 RAB20Q9NX57 234 aa9.6□□□□□ -0.87
HPS4-209ENST00000466781 SEPT10Q9P0V9 454 aa9.6□□□□□ -0.87
HPS4-209ENST00000466781 IGSF1Q8N6C5 1336 aa9.6□□□□□ -0.87
HPS4-209ENST00000466781 CHMLP26374 656 aa9.6□□□□□ -0.87
HPS4-209ENST00000466781 TUBB2AQ13885 445 aa9.6□□□□□ -0.87
HPS4-209ENST00000466781 SLC27A3Q5K4L6 730 aa9.6□□□□□ -0.87
HPS4-209ENST00000466781 PDZD4Q76G19 769 aaPredicted RBP9.6□□□□□ -0.87
HPS4-209ENST00000466781 CCDC105Q8IYK2 499 aa9.6□□□□□ -0.87
HPS4-209ENST00000466781 ZBTB9Q96C00 473 aa9.6□□□□□ -0.87
HPS4-209ENST00000466781 TUBB2BQ9BVA1 445 aa9.6□□□□□ -0.87
HPS4-209ENST00000466781 ARPP21Q9UBL0 812 aaPredicted RBP9.6□□□□□ -0.87
HPS4-209ENST00000466781 KRT3P12035 628 aa9.6□□□□□ -0.87
HPS4-209ENST00000466781 RAD51AP2Q09MP3 1159 aa9.6□□□□□ -0.87
HPS4-209ENST00000466781 MIPOL1Q8TD10 442 aa9.6□□□□□ -0.87
HPS4-209ENST00000466781 AFAP1L1Q8TED9 768 aa9.6□□□□□ -0.87
HPS4-209ENST00000466781 NT5C3AQ9H0P0 336 aa9.6□□□□□ -0.87
HPS4-209ENST00000466781 VPS37BQ9H9H4 285 aa9.6□□□□□ -0.87
HPS4-209ENST00000466781 GNA14O95837 355 aa9.6□□□□□ -0.87
HPS4-209ENST00000466781 ARHGAP44Q17R89 818 aa9.6□□□□□ -0.87
HPS4-209ENST00000466781 SCYL2Q6P3W7 929 aa9.6□□□□□ -0.87
HPS4-209ENST00000466781 LLPHQ9BRT6 129 aaKnown RBP9.6□□□□□ -0.87
HPS4-209ENST00000466781 E9PCH4 1651 aa9.59□□□□□ -0.87
HPS4-209ENST00000466781 TYW5A2RUC4 315 aaKnown RBP9.59□□□□□ -0.87
HPS4-209ENST00000466781 HMGB1P1B2RPK0 211 aaPredicted RBP9.59□□□□□ -0.87
HPS4-209ENST00000466781 CEP104O60308 925 aa9.59□□□□□ -0.87
HPS4-209ENST00000466781 NPR1P16066 1061 aa9.59□□□□□ -0.87
HPS4-209ENST00000466781 CHRNDQ07001 517 aa9.59□□□□□ -0.87
HPS4-209ENST00000466781 TTC31Q49AM3 519 aaPredicted RBP9.59□□□□□ -0.87
HPS4-209ENST00000466781 SH2D4BQ5SQS7 431 aa9.59□□□□□ -0.87
HPS4-209ENST00000466781 MCF2L2Q86YR7 1114 aa9.59□□□□□ -0.87
HPS4-209ENST00000466781 RTKN2Q8IZC4 609 aa9.59□□□□□ -0.87
HPS4-209ENST00000466781 RPS6KC1Q96S38 1066 aa9.59□□□□□ -0.87
HPS4-209ENST00000466781 KIF9Q9HAQ2 790 aa9.59□□□□□ -0.87
HPS4-209ENST00000466781 S100BP04271 92 aaPredicted RBP9.59□□□□□ -0.87
HPS4-209ENST00000466781 ZAP70P43403 619 aa9.59□□□□□ -0.87
HPS4-209ENST00000466781 KLHL30Q0D2K2 578 aa9.59□□□□□ -0.87
HPS4-209ENST00000466781 LRMPQ12912 555 aa9.59□□□□□ -0.87
HPS4-209ENST00000466781 PPP2R5BQ15173 497 aa9.59□□□□□ -0.87
HPS4-209ENST00000466781 FAM160B1Q5W0V3 765 aa9.59□□□□□ -0.87
HPS4-209ENST00000466781 NELFBQ8WX92 580 aa9.59□□□□□ -0.87
HPS4-209ENST00000466781 HAUS1Q96CS2 278 aa9.59□□□□□ -0.87
HPS4-209ENST00000466781 IPO11Q9UI26 975 aaKnown RBP9.59□□□□□ -0.87
HPS4-209ENST00000466781 MRPL11Q9Y3B7 192 aaKnown RBP9.59□□□□□ -0.87
HPS4-209ENST00000466781 PRAMEF22A3QJZ6 481 aa9.59□□□□□ -0.87
HPS4-209ENST00000466781 KRT15P19012 456 aa9.59□□□□□ -0.87
HPS4-209ENST00000466781 SCNN1DP51172 638 aa9.59□□□□□ -0.87
HPS4-209ENST00000466781 HADHQ16836 314 aaKnown RBP9.59□□□□□ -0.87
HPS4-209ENST00000466781 PIM2Q9P1W9 311 aa9.59□□□□□ -0.87
HPS4-209ENST00000466781 TSKSQ9UJT2 592 aa9.59□□□□□ -0.87
HPS4-209ENST00000466781 LRFN2Q9ULH4 789 aa9.59□□□□□ -0.87
HPS4-209ENST00000466781 ZBTB1Q9Y2K1 713 aa9.59□□□□□ -0.87
HPS4-209ENST00000466781 CRB1P82279 1406 aa9.59□□□□□ -0.87
HPS4-209ENST00000466781 H0YCG3 227 aa9.59□□□□□ -0.87
HPS4-209ENST00000466781 ALAS1P13196 640 aa9.59□□□□□ -0.87
HPS4-209ENST00000466781 ERCC3P19447 782 aa9.59□□□□□ -0.87
HPS4-209ENST00000466781 MCTP2Q6DN12 878 aa9.59□□□□□ -0.87
HPS4-209ENST00000466781 ARMC9Q7Z3E5 817 aa9.59□□□□□ -0.87
HPS4-209ENST00000466781 PIGBQ92521 554 aa9.59□□□□□ -0.87
HPS4-209ENST00000466781 HVCN1Q96D96 273 aa9.59□□□□□ -0.87
HPS4-209ENST00000466781 PARP2Q9UGN5 583 aa9.59□□□□□ -0.87
HPS4-209ENST00000466781 POLR2MP0CAP2 368 aa9.59□□□□□ -0.87
HPS4-209ENST00000466781 XPAP23025 273 aaPredicted RBP9.59□□□□□ -0.87
HPS4-209ENST00000466781 EN1Q05925 392 aaPredicted RBP9.59□□□□□ -0.87
HPS4-209ENST00000466781 ABI1Q8IZP0 508 aa9.59□□□□□ -0.87
HPS4-209ENST00000466781 PPP4R1Q8TF05 950 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms