RNA–Protein interactions for RNA: ENST00000436630.6

RPE-208, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 1,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-208ENST00000436630 TMEM232C9JQI7 657 aa15.52■□□□□ 0.08
RPE-208ENST00000436630 IRF6O14896 467 aa15.52■□□□□ 0.08
RPE-208ENST00000436630 SCG2P13521 617 aa15.52■□□□□ 0.08
RPE-208ENST00000436630 PABPC4Q13310 644 aaKnown RBP eCLIP15.52■□□□□ 0.08
RPE-208ENST00000436630 TRIM29Q14134 588 aa15.52■□□□□ 0.08
RPE-208ENST00000436630 PFKFB3Q16875 520 aaPredicted RBP15.52■□□□□ 0.08
RPE-208ENST00000436630 FASTKD5Q7L8L6 764 aaKnown RBP15.52■□□□□ 0.08
RPE-208ENST00000436630 MTMR8Q96EF0 704 aa15.52■□□□□ 0.08
RPE-208ENST00000436630 NUP88Q99567 741 aaPredicted RBP15.52■□□□□ 0.08
RPE-208ENST00000436630 TANGO6Q9C0B7 1094 aa15.52■□□□□ 0.08
RPE-208ENST00000436630 CHMP5Q9NZZ3 219 aa15.52■□□□□ 0.08
RPE-208ENST00000436630 A0A0G2JMZ2 1700 aa15.51■□□□□ 0.07
RPE-208ENST00000436630 RLFQ13129 1914 aa15.51■□□□□ 0.07
RPE-208ENST00000436630 WDR33Q9C0J8 1336 aaKnown RBP15.51■□□□□ 0.07
RPE-208ENST00000436630 TMEM88BA6NKF7 163 aa15.51■□□□□ 0.07
RPE-208ENST00000436630 CYTH3O43739 400 aa15.51■□□□□ 0.07
RPE-208ENST00000436630 FDPSP14324 419 aaKnown RBP15.51■□□□□ 0.07
RPE-208ENST00000436630 GTF2A2P52657 109 aa15.51■□□□□ 0.07
RPE-208ENST00000436630 KIAA1755Q5JYT7 1200 aa15.51■□□□□ 0.07
RPE-208ENST00000436630 SAPCD2Q86UD0 394 aa15.51■□□□□ 0.07
RPE-208ENST00000436630 ADGRF4Q8IZF3 695 aa15.51■□□□□ 0.07
RPE-208ENST00000436630 CMTR1Q8N1G2 835 aaKnown RBP15.51■□□□□ 0.07
RPE-208ENST00000436630 CCDC82Q8N4S0 544 aa15.51■□□□□ 0.07
RPE-208ENST00000436630 CCDC148Q8NFR7 591 aa15.51■□□□□ 0.07
RPE-208ENST00000436630 CCDC12Q8WUD4 166 aaPredicted RBP15.51■□□□□ 0.07
RPE-208ENST00000436630 C8orf76Q96K31 380 aa15.51■□□□□ 0.07
RPE-208ENST00000436630 SLF1Q9BQI6 1058 aa15.51■□□□□ 0.07
RPE-208ENST00000436630 ALG1Q9BT22 464 aa15.51■□□□□ 0.07
RPE-208ENST00000436630 RPAP3Q9H6T3 665 aaPredicted RBP15.51■□□□□ 0.07
RPE-208ENST00000436630 SH3GLB2Q9NR46 395 aa15.51■□□□□ 0.07
RPE-208ENST00000436630 TLL2Q9Y6L7 1015 aa15.51■□□□□ 0.07
RPE-208ENST00000436630 V9GY48 417 aaPredicted RBP15.51■□□□□ 0.07
RPE-208ENST00000436630 PNMA6FA0A0J9YX94 578 aa15.5■□□□□ 0.07
RPE-208ENST00000436630 USP17L15C9J2P7 530 aa15.5■□□□□ 0.07
RPE-208ENST00000436630 USP17L13C9JLJ4 530 aa15.5■□□□□ 0.07
RPE-208ENST00000436630 USP17L11C9JVI0 530 aa15.5■□□□□ 0.07
RPE-208ENST00000436630 USP17L18D6R9N7 530 aa15.5■□□□□ 0.07
RPE-208ENST00000436630 USP17L22D6RA61 530 aa15.5■□□□□ 0.07
RPE-208ENST00000436630 USP17L17D6RBQ6 530 aa15.5■□□□□ 0.07
RPE-208ENST00000436630 USP17L19D6RCP7 530 aa15.5■□□□□ 0.07
RPE-208ENST00000436630 USP17L20D6RJB6 530 aa15.5■□□□□ 0.07
RPE-208ENST00000436630 H3BQV1 296 aa15.5■□□□□ 0.07
RPE-208ENST00000436630 ZBTB5O15062 677 aa15.5■□□□□ 0.07
RPE-208ENST00000436630 CETPP11597 493 aa15.5■□□□□ 0.07
RPE-208ENST00000436630 USP17L24Q0WX57 530 aa15.5■□□□□ 0.07
RPE-208ENST00000436630 IFFO2Q5TF58 517 aa15.5■□□□□ 0.07
RPE-208ENST00000436630 LARP1BQ659C4 914 aaKnown RBP15.5■□□□□ 0.07
RPE-208ENST00000436630 TTBK2Q6IQ55 1244 aa15.5■□□□□ 0.07
RPE-208ENST00000436630 PPP1R18Q6NYC8 613 aa15.5■□□□□ 0.07
RPE-208ENST00000436630 TEX2Q8IWB9 1127 aa15.5■□□□□ 0.07
RPE-208ENST00000436630 PRPF38AQ8NAV1 312 aaKnown RBP15.5■□□□□ 0.07
RPE-208ENST00000436630 CNKSR2Q8WXI2 1034 aa15.5■□□□□ 0.07
RPE-208ENST00000436630 JMJD4Q9H9V9 463 aa15.5■□□□□ 0.07
RPE-208ENST00000436630 PPP1R9AQ9ULJ8 1098 aa15.5■□□□□ 0.07
RPE-208ENST00000436630 AGTPBP1Q9UPW5 1226 aa15.5■□□□□ 0.07
RPE-208ENST00000436630 RBBP6Q7Z6E9 1792 aaKnown RBP15.49■□□□□ 0.07
RPE-208ENST00000436630 STX6O43752 255 aa15.49■□□□□ 0.07
RPE-208ENST00000436630 FLOT1O75955 427 aa15.49■□□□□ 0.07
RPE-208ENST00000436630 SYT1P21579 422 aa15.49■□□□□ 0.07
RPE-208ENST00000436630 HOXA7P31268 230 aaPredicted RBP15.49■□□□□ 0.07
RPE-208ENST00000436630 CDC37Q16543 378 aaPredicted RBP15.49■□□□□ 0.07
RPE-208ENST00000436630 SLC35G1Q2M3R5 365 aa15.49■□□□□ 0.07
RPE-208ENST00000436630 SPRYD7Q5W111 196 aa15.49■□□□□ 0.07
RPE-208ENST00000436630 RGMBQ6NW40 437 aa15.49■□□□□ 0.07
RPE-208ENST00000436630 UBA5Q9GZZ9 404 aa15.49■□□□□ 0.07
RPE-208ENST00000436630 RANBP17Q9H2T7 1088 aaKnown RBP15.49■□□□□ 0.07
RPE-208ENST00000436630 PNMA3Q9UL41 463 aa15.49■□□□□ 0.07
RPE-208ENST00000436630 PRR12Q9ULL5 1215 aa15.49■□□□□ 0.07
RPE-208ENST00000436630 SLC45A1Q9Y2W3 748 aa15.49■□□□□ 0.07
RPE-208ENST00000436630 CALML3P27482 149 aa15.48■□□□□ 0.07
RPE-208ENST00000436630 SLC16A2P36021 539 aa15.48■□□□□ 0.07
RPE-208ENST00000436630 GJA5P36382 358 aa15.48■□□□□ 0.07
RPE-208ENST00000436630 PKN1Q16512 942 aa15.48■□□□□ 0.07
RPE-208ENST00000436630 GALNT17Q6IS24 598 aa15.48■□□□□ 0.07
RPE-208ENST00000436630 GADL1Q6ZQY3 521 aa15.48■□□□□ 0.07
RPE-208ENST00000436630 CATSPERGQ6ZRH7 1159 aa15.48■□□□□ 0.07
RPE-208ENST00000436630 HOMER1Q86YM7 354 aa15.48■□□□□ 0.07
RPE-208ENST00000436630 RASAL3Q86YV0 1011 aa15.48■□□□□ 0.07
RPE-208ENST00000436630 FBXO18Q8NFZ0 1043 aa15.48■□□□□ 0.07
RPE-208ENST00000436630 GTF3C2Q8WUA4 911 aaPredicted RBP15.48■□□□□ 0.07
RPE-208ENST00000436630 CCDC102AQ96A19 550 aa15.48■□□□□ 0.07
RPE-208ENST00000436630 PIGSQ96S52 555 aa15.48■□□□□ 0.07
RPE-208ENST00000436630 GLT8D2Q9H1C3 349 aa15.48■□□□□ 0.07
RPE-208ENST00000436630 BARHL2Q9NY43 387 aa15.48■□□□□ 0.07
RPE-208ENST00000436630 COL11A1P12107 1806 aaPredicted RBP15.47■□□□□ 0.07
RPE-208ENST00000436630 MYH15Q9Y2K3 1946 aa15.47■□□□□ 0.07
RPE-208ENST00000436630 ESYT2A0FGR8 921 aa15.47■□□□□ 0.07
RPE-208ENST00000436630 VPS37CA5D8V6 355 aaPredicted RBP15.47■□□□□ 0.07
RPE-208ENST00000436630 SLC10A3P09131 477 aa15.47■□□□□ 0.07
RPE-208ENST00000436630 ZNF157P51786 506 aaPredicted RBP15.47■□□□□ 0.07
RPE-208ENST00000436630 OAZ1P54368 228 aa15.47■□□□□ 0.07
RPE-208ENST00000436630 IRX3P78415 501 aaPredicted RBP15.47■□□□□ 0.07
RPE-208ENST00000436630 COG2Q14746 738 aa15.47■□□□□ 0.07
RPE-208ENST00000436630 SAFBQ15424 915 aaKnown RBP eCLIP15.47■□□□□ 0.07
RPE-208ENST00000436630 HEATR3Q7Z4Q2 680 aa15.47■□□□□ 0.07
RPE-208ENST00000436630 KIFC2Q96AC6 838 aa15.47■□□□□ 0.07
RPE-208ENST00000436630 AMNQ9BXJ7 453 aa15.47■□□□□ 0.07
RPE-208ENST00000436630 CPVLQ9H3G5 476 aa15.47■□□□□ 0.07
RPE-208ENST00000436630 BRMS1Q9HCU9 246 aa15.47■□□□□ 0.07
RPE-208ENST00000436630 ZCCHC17Q9NP64 241 aaKnown RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms