RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 SAR1BQ9Y6B6 198 aa26.93■■□□□ 1.9
CSNK1E-203ENST00000396832 EPN1Q9Y6I3 576 aaPredicted RBP26.93■■□□□ 1.9
CSNK1E-203ENST00000396832 GOLGA6CA6NDK9 693 aa26.92■■□□□ 1.9
CSNK1E-203ENST00000396832 PSMD14O00487 310 aa26.92■■□□□ 1.9
CSNK1E-203ENST00000396832 ATP1A1P05023 1023 aaKnown RBP26.92■■□□□ 1.9
CSNK1E-203ENST00000396832 GOLGA6DP0CG33 693 aa26.92■■□□□ 1.9
CSNK1E-203ENST00000396832 TTC38Q5R3I4 469 aa26.92■■□□□ 1.9
CSNK1E-203ENST00000396832 MTRQ99707 1265 aa26.92■■□□□ 1.9
CSNK1E-203ENST00000396832 GOLGA6AQ9NYA3 693 aa26.92■■□□□ 1.9
CSNK1E-203ENST00000396832 MYH3P11055 1940 aa26.92■■□□□ 1.9
CSNK1E-203ENST00000396832 TARSL2A2RTX5 802 aaKnown RBP26.92■■□□□ 1.9
CSNK1E-203ENST00000396832 DYNLL1P63167 89 aaKnown RBP26.92■■□□□ 1.9
CSNK1E-203ENST00000396832 SELENOOQ9BVL4 669 aa26.92■■□□□ 1.9
CSNK1E-203ENST00000396832 MYBL2P10244 700 aa26.92■■□□□ 1.9
CSNK1E-203ENST00000396832 IFIT1BQ5T764 474 aaKnown RBP26.92■■□□□ 1.9
CSNK1E-203ENST00000396832 RABEP2Q9H5N1 569 aa26.92■■□□□ 1.9
CSNK1E-203ENST00000396832 NDUFA10O95299 355 aa26.91■■□□□ 1.9
CSNK1E-203ENST00000396832 XBP1P17861 261 aa26.91■■□□□ 1.9
CSNK1E-203ENST00000396832 UBXN1Q04323 297 aa26.91■■□□□ 1.9
CSNK1E-203ENST00000396832 NELFBQ8WX92 580 aa26.91■■□□□ 1.9
CSNK1E-203ENST00000396832 PHF20Q9BVI0 1012 aa26.91■■□□□ 1.9
CSNK1E-203ENST00000396832 EHD4Q9H223 541 aa26.91■■□□□ 1.9
CSNK1E-203ENST00000396832 MTMR7Q9Y216 660 aa26.91■■□□□ 1.9
CSNK1E-203ENST00000396832 BRINP3Q76B58 766 aa26.91■■□□□ 1.9
CSNK1E-203ENST00000396832 SH3RF1Q7Z6J0 888 aa26.91■■□□□ 1.9
CSNK1E-203ENST00000396832 BAZ2AQ9UIF9 1905 aaKnown RBP26.9■■□□□ 1.9
CSNK1E-203ENST00000396832 COPB1P53618 953 aaKnown RBP26.9■■□□□ 1.9
CSNK1E-203ENST00000396832 RNF26Q9BY78 433 aaPredicted RBP26.9■■□□□ 1.9
CSNK1E-203ENST00000396832 COL5A2P05997 1499 aaPredicted RBP26.9■■□□□ 1.9
CSNK1E-203ENST00000396832 KCNJ18B7U540 433 aa26.9■■□□□ 1.9
CSNK1E-203ENST00000396832 HNRNPH1P31943 449 aaKnown RBP26.9■■□□□ 1.9
CSNK1E-203ENST00000396832 KCNJ12Q14500 433 aa26.9■■□□□ 1.9
CSNK1E-203ENST00000396832 SEC23AQ15436 765 aa26.9■■□□□ 1.9
CSNK1E-203ENST00000396832 CCNI2Q6ZMN8 369 aaPredicted RBP26.9■■□□□ 1.9
CSNK1E-203ENST00000396832 BCAS4Q8TDM0 211 aa26.9■■□□□ 1.9
CSNK1E-203ENST00000396832 GSDMAQ96QA5 445 aa26.9■■□□□ 1.9
CSNK1E-203ENST00000396832 LIMA1Q9UHB6 759 aaKnown RBP26.9■■□□□ 1.9
CSNK1E-203ENST00000396832 TOGARAM1Q9Y4F4 1720 aa26.89■■□□□ 1.9
CSNK1E-203ENST00000396832 MNAT1P51948 309 aa26.89■■□□□ 1.9
CSNK1E-203ENST00000396832 FBXW10Q5XX13 1052 aa26.89■■□□□ 1.9
CSNK1E-203ENST00000396832 ESR2Q92731 530 aa26.89■■□□□ 1.9
CSNK1E-203ENST00000396832 MROH5Q6ZUA9 1318 aa26.89■■□□□ 1.9
CSNK1E-203ENST00000396832 GOLGA6BA6NDN3 693 aa26.89■■□□□ 1.89
CSNK1E-203ENST00000396832 GYG1P46976 350 aa26.89■■□□□ 1.89
CSNK1E-203ENST00000396832 HAUS4Q9H6D7 363 aa26.89■■□□□ 1.89
CSNK1E-203ENST00000396832 LRRC10BA6NIK2 292 aa26.88■■□□□ 1.89
CSNK1E-203ENST00000396832 RASGRP4Q8TDF6 673 aa26.88■■□□□ 1.89
CSNK1E-203ENST00000396832 PPFIA1Q13136 1202 aa26.88■■□□□ 1.89
CSNK1E-203ENST00000396832 PAK1Q13153 545 aa26.88■■□□□ 1.89
CSNK1E-203ENST00000396832 IL17AQ16552 155 aa26.88■■□□□ 1.89
CSNK1E-203ENST00000396832 FAM47AQ5JRC9 791 aa26.88■■□□□ 1.89
CSNK1E-203ENST00000396832 SUSD4Q5VX71 490 aa26.88■■□□□ 1.89
CSNK1E-203ENST00000396832 PAPD7Q5XG87 772 aaKnown RBP26.88■■□□□ 1.89
CSNK1E-203ENST00000396832 RASSF8Q8NHQ8 419 aa26.88■■□□□ 1.89
CSNK1E-203ENST00000396832 ZSCAN10Q96SZ4 725 aaPredicted RBP26.88■■□□□ 1.89
CSNK1E-203ENST00000396832 CAPS2Q9BXY5 557 aa26.88■■□□□ 1.89
CSNK1E-203ENST00000396832 PAPPAQ13219 1627 aa26.88■■□□□ 1.89
CSNK1E-203ENST00000396832 CHRM1P11229 460 aaPredicted RBP26.87■■□□□ 1.89
CSNK1E-203ENST00000396832 GSCP56915 257 aaPredicted RBP26.87■■□□□ 1.89
CSNK1E-203ENST00000396832 TRIM14Q14142 442 aa26.87■■□□□ 1.89
CSNK1E-203ENST00000396832 RNF41Q9H4P4 317 aaPredicted RBP26.87■■□□□ 1.89
CSNK1E-203ENST00000396832 PP2D1A8MPX8 630 aa26.87■■□□□ 1.89
CSNK1E-203ENST00000396832 CYP19A1P11511 503 aaPredicted RBP26.87■■□□□ 1.89
CSNK1E-203ENST00000396832 CCDC122Q5T0U0 273 aa26.87■■□□□ 1.89
CSNK1E-203ENST00000396832 CATIPQ7Z7H3 387 aa26.87■■□□□ 1.89
CSNK1E-203ENST00000396832 RPGRIP1Q96KN7 1286 aa26.87■■□□□ 1.89
CSNK1E-203ENST00000396832 TCP11X2Q5H9J9 407 aa26.86■■□□□ 1.89
CSNK1E-203ENST00000396832 PMS1P54277 932 aaKnown RBP26.86■■□□□ 1.89
CSNK1E-203ENST00000396832 CKAP4Q07065 602 aaKnown RBP26.86■■□□□ 1.89
CSNK1E-203ENST00000396832 TMTC2Q8N394 836 aa26.86■■□□□ 1.89
CSNK1E-203ENST00000396832 JAKMIP2Q96AA8 810 aa26.86■■□□□ 1.89
CSNK1E-203ENST00000396832 CARD10Q9BWT7 1032 aa26.86■■□□□ 1.89
CSNK1E-203ENST00000396832 MAGEB6P1A0A0J9YX57 407 aa26.86■■□□□ 1.89
CSNK1E-203ENST00000396832 PRCPP42785 496 aa26.86■■□□□ 1.89
CSNK1E-203ENST00000396832 NPY5RQ15761 445 aa26.86■■□□□ 1.89
CSNK1E-203ENST00000396832 KCNV1Q6PIU1 500 aa26.86■■□□□ 1.89
CSNK1E-203ENST00000396832 CAGE1Q8TC20 777 aa26.86■■□□□ 1.89
CSNK1E-203ENST00000396832 TTC26A0AVF1 554 aa26.85■■□□□ 1.89
CSNK1E-203ENST00000396832 SHTN1A0MZ66 631 aa26.85■■□□□ 1.89
CSNK1E-203ENST00000396832 NLRP5P59047 1200 aa26.85■■□□□ 1.89
CSNK1E-203ENST00000396832 FUT2Q10981 343 aa26.85■■□□□ 1.89
CSNK1E-203ENST00000396832 INPP5BP32019 993 aa26.85■■□□□ 1.89
CSNK1E-203ENST00000396832 GNGT1P63211 74 aa26.85■■□□□ 1.89
CSNK1E-203ENST00000396832 MRPS25P82663 173 aaKnown RBP26.85■■□□□ 1.89
CSNK1E-203ENST00000396832 JAG2Q9Y219 1238 aa26.85■■□□□ 1.89
CSNK1E-203ENST00000396832 EIF3HO15372 352 aaKnown RBP eCLIP26.84■■□□□ 1.892e-8■□□□□ 9.9
CSNK1E-203ENST00000396832 GNAT2P19087 354 aa26.84■■□□□ 1.89
CSNK1E-203ENST00000396832 FERMT2Q96AC1 680 aa26.84■■□□□ 1.89
CSNK1E-203ENST00000396832 ZNF185O15231 689 aa26.84■■□□□ 1.89
CSNK1E-203ENST00000396832 HERVK_113P62684 666 aa26.84■■□□□ 1.89
CSNK1E-203ENST00000396832 TTC19Q6DKK2 380 aaPredicted RBP26.84■■□□□ 1.89
CSNK1E-203ENST00000396832 SRBD1Q8N5C6 995 aaKnown RBP26.84■■□□□ 1.89
CSNK1E-203ENST00000396832 GPKOWQ92917 476 aaPredicted RBP eCLIP26.84■■□□□ 1.892e-6■■□□□ 13
CSNK1E-203ENST00000396832 SLAIN2Q9P270 581 aa26.84■■□□□ 1.89
CSNK1E-203ENST00000396832 NID2Q14112 1375 aa26.84■■□□□ 1.89
CSNK1E-203ENST00000396832 RTL9Q8NET4 1388 aa26.84■■□□□ 1.89
CSNK1E-203ENST00000396832 KLK7P49862 253 aa26.83■■□□□ 1.89
CSNK1E-203ENST00000396832 ANKRD20A12PQ8NF67 263 aa26.83■■□□□ 1.89
CSNK1E-203ENST00000396832 CXorf56Q9H5V9 222 aa26.83■■□□□ 1.89
CSNK1E-203ENST00000396832 GNL3LQ9NVN8 582 aaKnown RBP26.83■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms