RNA–Protein interactions for RNA: ENST00000395713.6

TRPS1-202, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 3

Gene TRPS1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-202ENST00000395713 SPACA3Q8IXA5 215 aa6.89□□□□□ -1.31
TRPS1-202ENST00000395713 PLD6Q8N2A8 252 aaKnown RBP6.89□□□□□ -1.31
TRPS1-202ENST00000395713 RNPC3Q96LT9 517 aaKnown RBP6.89□□□□□ -1.31
TRPS1-202ENST00000395713 SPATA9Q9BWV2 254 aa6.89□□□□□ -1.31
TRPS1-202ENST00000395713 GPR62Q9BZJ7 368 aa6.89□□□□□ -1.31
TRPS1-202ENST00000395713 ASCC2Q9H1I8 757 aaPredicted RBP6.89□□□□□ -1.31
TRPS1-202ENST00000395713 DUSP15Q9H1R2 295 aaPredicted RBP6.89□□□□□ -1.31
TRPS1-202ENST00000395713 NOL6Q9H6R4 1146 aaKnown RBP6.89□□□□□ -1.31
TRPS1-202ENST00000395713 LRP2BPQ9P2M1 347 aa6.89□□□□□ -1.31
TRPS1-202ENST00000395713 ZC3H7BQ9UGR2 993 aaKnown RBP6.89□□□□□ -1.31
TRPS1-202ENST00000395713 ST14Q9Y5Y6 855 aa6.89□□□□□ -1.31
TRPS1-202ENST00000395713 RSF1Q96T23 1441 aaPredicted RBP6.89□□□□□ -1.31
TRPS1-202ENST00000395713 AQRO60306 1485 aaKnown RBP eCLIP6.88□□□□□ -1.31
TRPS1-202ENST00000395713 A0A087WZG4 1122 aa6.88□□□□□ -1.31
TRPS1-202ENST00000395713 A0A1W2PQU0 124 aa6.88□□□□□ -1.31
TRPS1-202ENST00000395713 WASH4PA8MWX3 477 aa6.88□□□□□ -1.31
TRPS1-202ENST00000395713 AGRPO00253 132 aa6.88□□□□□ -1.31
TRPS1-202ENST00000395713 TGFB1P01137 390 aa6.88□□□□□ -1.31
TRPS1-202ENST00000395713 ITGAVP06756 1048 aa6.88□□□□□ -1.31
TRPS1-202ENST00000395713 SRFP11831 508 aa6.88□□□□□ -1.31
TRPS1-202ENST00000395713 HOXA10P31260 410 aaPredicted RBP6.88□□□□□ -1.31
TRPS1-202ENST00000395713 PPP2R5DQ14738 602 aa6.88□□□□□ -1.31
TRPS1-202ENST00000395713 CLEC16AQ2KHT3 1053 aa6.88□□□□□ -1.31
TRPS1-202ENST00000395713 FIBCD1Q8N539 461 aa6.88□□□□□ -1.31
TRPS1-202ENST00000395713 BVESQ8NE79 360 aa6.88□□□□□ -1.31
TRPS1-202ENST00000395713 SYTL5Q8TDW5 730 aaPredicted RBP6.88□□□□□ -1.31
TRPS1-202ENST00000395713 SH3TC2Q8TF17 1288 aa6.88□□□□□ -1.31
TRPS1-202ENST00000395713 RCC1LQ96I51 464 aaKnown RBP6.88□□□□□ -1.31
TRPS1-202ENST00000395713 HSPA12BQ96MM6 686 aa6.88□□□□□ -1.31
TRPS1-202ENST00000395713 DSCC1Q9BVC3 393 aa6.88□□□□□ -1.31
TRPS1-202ENST00000395713 CHST7Q9NS84 486 aa6.88□□□□□ -1.31
TRPS1-202ENST00000395713 PRR13Q9NZ81 148 aa6.88□□□□□ -1.31
TRPS1-202ENST00000395713 AKT3Q9Y243 479 aa6.88□□□□□ -1.31
TRPS1-202ENST00000395713 FHOD1Q9Y613 1164 aa6.88□□□□□ -1.31
TRPS1-202ENST00000395713 ABCC8Q09428 1581 aa6.87□□□□□ -1.31
TRPS1-202ENST00000395713 IQCA1LA6NCM1 817 aa6.87□□□□□ -1.31
TRPS1-202ENST00000395713 H3BS24 57 aa6.87□□□□□ -1.31
TRPS1-202ENST00000395713 FAM153BP0C7A2 387 aa6.87□□□□□ -1.31
TRPS1-202ENST00000395713 FOSL1P15407 271 aa6.87□□□□□ -1.31
TRPS1-202ENST00000395713 SDE2Q6IQ49 451 aa6.87□□□□□ -1.31
TRPS1-202ENST00000395713 ZNF227Q86WZ6 799 aa6.87□□□□□ -1.31
TRPS1-202ENST00000395713 LRRC47Q8N1G4 583 aaKnown RBP6.87□□□□□ -1.31
TRPS1-202ENST00000395713 NLGN1Q8N2Q7 840 aa6.87□□□□□ -1.31
TRPS1-202ENST00000395713 ARHGEF39Q8N4T4 335 aa6.87□□□□□ -1.31
TRPS1-202ENST00000395713 NETO1Q8TDF5 533 aa6.87□□□□□ -1.31
TRPS1-202ENST00000395713 SGSM3Q96HU1 749 aa6.87□□□□□ -1.31
TRPS1-202ENST00000395713 HDAC8Q9BY41 377 aa6.87□□□□□ -1.31
TRPS1-202ENST00000395713 ZSWIM5Q9P217 1185 aa6.87□□□□□ -1.31
TRPS1-202ENST00000395713 CGGBP1Q9UFW8 167 aaPredicted RBP6.87□□□□□ -1.31
TRPS1-202ENST00000395713 DIS3Q9Y2L1 958 aaKnown RBP6.87□□□□□ -1.31
TRPS1-202ENST00000395713 EMC9Q9Y3B6 208 aa6.87□□□□□ -1.31
TRPS1-202ENST00000395713 TOPBP1Q92547 1522 aa6.86□□□□□ -1.31
TRPS1-202ENST00000395713 NOP56O00567 594 aaKnown RBP6.86□□□□□ -1.31
TRPS1-202ENST00000395713 TBX1O43435 398 aa6.86□□□□□ -1.31
TRPS1-202ENST00000395713 IFI16Q16666 785 aaKnown RBP6.86□□□□□ -1.31
TRPS1-202ENST00000395713 C2orf27AQ580R0 203 aa6.86□□□□□ -1.31
TRPS1-202ENST00000395713 JMYQ8N9B5 988 aa6.86□□□□□ -1.31
TRPS1-202ENST00000395713 DAGLBQ8NCG7 672 aa6.86□□□□□ -1.31
TRPS1-202ENST00000395713 ENOX1Q8TC92 643 aaKnown RBP6.86□□□□□ -1.31
TRPS1-202ENST00000395713 THAP3Q8WTV1 239 aaPredicted RBP6.86□□□□□ -1.31
TRPS1-202ENST00000395713 UBE2FQ969M7 185 aa6.86□□□□□ -1.31
TRPS1-202ENST00000395713 MRGPRX3Q96LB0 322 aa6.86□□□□□ -1.31
TRPS1-202ENST00000395713 ZDHHC15Q96MV8 337 aa6.86□□□□□ -1.31
TRPS1-202ENST00000395713 TRIT1Q9H3H1 467 aaKnown RBP6.86□□□□□ -1.31
TRPS1-202ENST00000395713 CWC22Q9HCG8 908 aaKnown RBP6.86□□□□□ -1.31
TRPS1-202ENST00000395713 GPATCH2Q9NW75 528 aa6.86□□□□□ -1.31
TRPS1-202ENST00000395713 TMEM265A0A087WTH1 108 aa6.85□□□□□ -1.31
TRPS1-202ENST00000395713 H0Y8X5 98 aa6.85□□□□□ -1.31
TRPS1-202ENST00000395713 ADCY3O60266 1144 aa6.85□□□□□ -1.31
TRPS1-202ENST00000395713 VAMP4O75379 141 aa6.85□□□□□ -1.31
TRPS1-202ENST00000395713 TPP2P29144 1249 aaPredicted RBP6.85□□□□□ -1.31
TRPS1-202ENST00000395713 CTSKP43235 329 aa6.85□□□□□ -1.31
TRPS1-202ENST00000395713 CLCN7P51798 805 aa6.85□□□□□ -1.31
TRPS1-202ENST00000395713 PPP2R2AP63151 447 aa6.85□□□□□ -1.31
TRPS1-202ENST00000395713 SQSTM1Q13501 440 aa6.85□□□□□ -1.31
TRPS1-202ENST00000395713 TSPYL5Q86VY4 417 aaPredicted RBP6.85□□□□□ -1.31
TRPS1-202ENST00000395713 TRIM59Q8IWR1 403 aa6.85□□□□□ -1.31
TRPS1-202ENST00000395713 ZBTB38Q8NAP3 1195 aaPredicted RBP6.85□□□□□ -1.31
TRPS1-202ENST00000395713 TCTN2Q96GX1 697 aa6.85□□□□□ -1.31
TRPS1-202ENST00000395713 ARHGEF4Q9NR80 690 aa6.85□□□□□ -1.31
TRPS1-202ENST00000395713 SEMA3GQ9NS98 782 aa6.85□□□□□ -1.31
TRPS1-202ENST00000395713 SF3B6Q9Y3B4 125 aaKnown RBP6.85□□□□□ -1.31
TRPS1-202ENST00000395713 SNX11Q9Y5W9 270 aa6.85□□□□□ -1.31
TRPS1-202ENST00000395713 ESYT3A0FGR9 886 aa6.84□□□□□ -1.31
TRPS1-202ENST00000395713 KCNH1O95259 989 aa6.84□□□□□ -1.31
TRPS1-202ENST00000395713 GRIA2P42262 883 aa6.84□□□□□ -1.31
TRPS1-202ENST00000395713 HSP90AA2PQ14568 343 aaPredicted RBP6.84□□□□□ -1.31
TRPS1-202ENST00000395713 POMZP3Q6PJE2 187 aa6.84□□□□□ -1.31
TRPS1-202ENST00000395713 CRACR2BQ8N4Y2 399 aaPredicted RBP6.84□□□□□ -1.31
TRPS1-202ENST00000395713 ZNF655Q8N720 491 aaPredicted RBP6.84□□□□□ -1.31
TRPS1-202ENST00000395713 PTCH2Q9Y6C5 1203 aa6.84□□□□□ -1.31
TRPS1-202ENST00000395713 TOP2AP11388 1531 aaKnown RBP6.84□□□□□ -1.31
TRPS1-202ENST00000395713 TDRD9Q8NDG6 1382 aaKnown RBP6.83□□□□□ -1.32
TRPS1-202ENST00000395713 EIF4G3O43432 1585 aaKnown RBP6.83□□□□□ -1.32
TRPS1-202ENST00000395713 CAPNS1P04632 268 aa6.83□□□□□ -1.32
TRPS1-202ENST00000395713 GSNP06396 782 aa6.83□□□□□ -1.32
TRPS1-202ENST00000395713 DPY19L1Q2PZI1 675 aa6.83□□□□□ -1.32
TRPS1-202ENST00000395713 FOXB2Q5VYV0 432 aa6.83□□□□□ -1.32
TRPS1-202ENST00000395713 GTF2IRD2BQ6EKJ0 949 aa6.83□□□□□ -1.32
TRPS1-202ENST00000395713 CRTC3Q6UUV7 619 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms