RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 KARSQ15046 597 aaKnown RBP15.88■□□□□ 0.13
SHROOM1-203ENST00000378679 SMAP1Q8IYB5 467 aaPredicted RBP15.88■□□□□ 0.13
SHROOM1-203ENST00000378679 PGBD1Q96JS3 809 aa15.88■□□□□ 0.13
SHROOM1-203ENST00000378679 NOC4LQ9BVI4 516 aaKnown RBP15.88■□□□□ 0.13
SHROOM1-203ENST00000378679 ATP6V0A2Q9Y487 856 aa15.88■□□□□ 0.13
SHROOM1-203ENST00000378679 CCDC175P0C221 793 aa15.88■□□□□ 0.13
SHROOM1-203ENST00000378679 GYS1P13807 737 aa15.88■□□□□ 0.13
SHROOM1-203ENST00000378679 CCDC42Q96M95 316 aa15.88■□□□□ 0.13
SHROOM1-203ENST00000378679 BCL2L12Q9HB09 334 aa15.88■□□□□ 0.13
SHROOM1-203ENST00000378679 SLC10A5Q5PT55 438 aa15.88■□□□□ 0.13
SHROOM1-203ENST00000378679 MAEAQ7L5Y9 396 aa15.88■□□□□ 0.13
SHROOM1-203ENST00000378679 EPB41L4AQ9HCS5 686 aaPredicted RBP15.88■□□□□ 0.13
SHROOM1-203ENST00000378679 ARHGEF35A5YM69 484 aa15.87■□□□□ 0.13
SHROOM1-203ENST00000378679 FLOT1O75955 427 aa15.87■□□□□ 0.13
SHROOM1-203ENST00000378679 PAFAH1B1P43034 410 aa15.87■□□□□ 0.13
SHROOM1-203ENST00000378679 TBCKQ8TEA7 893 aa15.87■□□□□ 0.13
SHROOM1-203ENST00000378679 CNKSR2Q8WXI2 1034 aa15.87■□□□□ 0.13
SHROOM1-203ENST00000378679 MRVI1Q9Y6F6 885 aa15.87■□□□□ 0.13
SHROOM1-203ENST00000378679 NEK11Q8NG66 645 aa15.87■□□□□ 0.13
SHROOM1-203ENST00000378679 CEP95Q96GE4 821 aa15.87■□□□□ 0.13
SHROOM1-203ENST00000378679 BAG1Q99933 345 aaPredicted RBP15.87■□□□□ 0.13
SHROOM1-203ENST00000378679 TAB2Q9NYJ8 693 aa15.87■□□□□ 0.13
SHROOM1-203ENST00000378679 MYO6Q9UM54 1294 aa15.87■□□□□ 0.13
SHROOM1-203ENST00000378679 PAXBP1Q9Y5B6 917 aa15.87■□□□□ 0.13
SHROOM1-203ENST00000378679 AKR1B15C9JRZ8 316 aaPredicted RBP15.87■□□□□ 0.13
SHROOM1-203ENST00000378679 GH2P01242 217 aa15.87■□□□□ 0.13
SHROOM1-203ENST00000378679 BMP3P12645 472 aa15.87■□□□□ 0.13
SHROOM1-203ENST00000378679 RPL13P26373 211 aaKnown RBP15.87■□□□□ 0.13
SHROOM1-203ENST00000378679 C12orf60Q5U649 245 aa15.87■□□□□ 0.13
SHROOM1-203ENST00000378679 TMCO3Q6UWJ1 677 aa15.87■□□□□ 0.13
SHROOM1-203ENST00000378679 CNGA4Q8IV77 575 aa15.87■□□□□ 0.13
SHROOM1-203ENST00000378679 NELFBQ8WX92 580 aa15.87■□□□□ 0.13
SHROOM1-203ENST00000378679 ZNF277Q9NRM2 450 aaPredicted RBP15.87■□□□□ 0.13
SHROOM1-203ENST00000378679 LONP1P36776 959 aaKnown RBP15.86■□□□□ 0.13
SHROOM1-203ENST00000378679 TMEM87AQ8NBN3 555 aa15.86■□□□□ 0.13
SHROOM1-203ENST00000378679 TAOK3Q9H2K8 898 aa15.86■□□□□ 0.13
SHROOM1-203ENST00000378679 LZTFL1Q9NQ48 299 aa15.86■□□□□ 0.13
SHROOM1-203ENST00000378679 DDX25Q9UHL0 483 aaKnown RBP15.86■□□□□ 0.13
SHROOM1-203ENST00000378679 MRPL11Q9Y3B7 192 aaKnown RBP15.86■□□□□ 0.13
SHROOM1-203ENST00000378679 TNS2Q63HR2 1409 aa15.86■□□□□ 0.13
SHROOM1-203ENST00000378679 GAS7O60861 476 aa15.86■□□□□ 0.13
SHROOM1-203ENST00000378679 NT5C2P49902 561 aa15.86■□□□□ 0.13
SHROOM1-203ENST00000378679 FAM193AP78312 1265 aa15.86■□□□□ 0.13
SHROOM1-203ENST00000378679 GPR162Q16538 588 aa15.86■□□□□ 0.13
SHROOM1-203ENST00000378679 DPCR1Q3MIW9 517 aa15.86■□□□□ 0.13
SHROOM1-203ENST00000378679 DCAF17Q5H9S7 520 aaPredicted RBP15.86■□□□□ 0.13
SHROOM1-203ENST00000378679 TPH2Q8IWU9 490 aa15.86■□□□□ 0.13
SHROOM1-203ENST00000378679 NELFCDQ8IXH7 590 aa15.86■□□□□ 0.13
SHROOM1-203ENST00000378679 MYRIPQ8NFW9 859 aa15.86■□□□□ 0.13
SHROOM1-203ENST00000378679 JADE2Q9NQC1 790 aa15.86■□□□□ 0.13
SHROOM1-203ENST00000378679 FANCLQ9NW38 375 aa15.86■□□□□ 0.13
SHROOM1-203ENST00000378679 CSADQ9Y600 493 aa15.86■□□□□ 0.13
SHROOM1-203ENST00000378679 EEF2KMTQ96G04 330 aa15.86■□□□□ 0.13
SHROOM1-203ENST00000378679 TMCO5BA8MYB1 307 aa15.85■□□□□ 0.13
SHROOM1-203ENST00000378679 GCOM1H8Y6P7 765 aaPredicted RBP15.85■□□□□ 0.13
SHROOM1-203ENST00000378679 POLR2MP0CAP2 368 aa15.85■□□□□ 0.13
SHROOM1-203ENST00000378679 EAPPQ56P03 285 aaPredicted RBP15.85■□□□□ 0.13
SHROOM1-203ENST00000378679 IGDCC4Q8TDY8 1250 aa15.85■□□□□ 0.13
SHROOM1-203ENST00000378679 NT5C3AQ9H0P0 336 aa15.85■□□□□ 0.13
SHROOM1-203ENST00000378679 CETN3O15182 167 aa15.85■□□□□ 0.13
SHROOM1-203ENST00000378679 FGFR2P21802 821 aa15.85■□□□□ 0.13
SHROOM1-203ENST00000378679 ANTXR2P58335 489 aa15.85■□□□□ 0.13
SHROOM1-203ENST00000378679 DPY19L2Q6NUT2 758 aa15.85■□□□□ 0.13
SHROOM1-203ENST00000378679 C3orf67Q6ZVT6 689 aa15.85■□□□□ 0.13
SHROOM1-203ENST00000378679 ALS2CR12Q96Q35 445 aa15.85■□□□□ 0.13
SHROOM1-203ENST00000378679 ORC4O43929 436 aa15.85■□□□□ 0.13
SHROOM1-203ENST00000378679 LRMPQ12912 555 aa15.85■□□□□ 0.13
SHROOM1-203ENST00000378679 USP37Q86T82 979 aa15.85■□□□□ 0.13
SHROOM1-203ENST00000378679 SULF1Q8IWU6 871 aa15.85■□□□□ 0.13
SHROOM1-203ENST00000378679 GRAMD1CQ8IYS0 662 aa15.85■□□□□ 0.13
SHROOM1-203ENST00000378679 SRRTQ9BXP5 876 aaKnown RBP15.85■□□□□ 0.13
SHROOM1-203ENST00000378679 IRX3P78415 501 aaPredicted RBP15.84■□□□□ 0.13
SHROOM1-203ENST00000378679 PTF1AQ7RTS3 328 aa15.84■□□□□ 0.13
SHROOM1-203ENST00000378679 TXNRD3Q86VQ6 643 aa15.84■□□□□ 0.13
SHROOM1-203ENST00000378679 OXER1Q8TDS5 423 aa15.84■□□□□ 0.13
SHROOM1-203ENST00000378679 DRC1Q96MC2 740 aa15.84■□□□□ 0.13
SHROOM1-203ENST00000378679 USP17L5A8MUK1 530 aa15.84■□□□□ 0.13
SHROOM1-203ENST00000378679 FOSP01100 380 aaPredicted RBP15.84■□□□□ 0.13
SHROOM1-203ENST00000378679 AXDND1Q5T1B0 1012 aaPredicted RBP15.84■□□□□ 0.13
SHROOM1-203ENST00000378679 CLEC17AQ6ZS10 378 aa15.84■□□□□ 0.13
SHROOM1-203ENST00000378679 DAGLAQ9Y4D2 1042 aa15.84■□□□□ 0.13
SHROOM1-203ENST00000378679 TDRD7Q8NHU6 1098 aaKnown RBP15.84■□□□□ 0.13
SHROOM1-203ENST00000378679 CCDC102AQ96A19 550 aa15.84■□□□□ 0.13
SHROOM1-203ENST00000378679 EPSTI1Q96J88 318 aa15.84■□□□□ 0.13
SHROOM1-203ENST00000378679 AS3MTQ9HBK9 375 aa15.84■□□□□ 0.13
SHROOM1-203ENST00000378679 CCPG1Q9ULG6 757 aa15.84■□□□□ 0.13
SHROOM1-203ENST00000378679 GTPBP6O43824 516 aaPredicted RBP15.84■□□□□ 0.13
SHROOM1-203ENST00000378679 KRT9P35527 623 aa15.84■□□□□ 0.13
SHROOM1-203ENST00000378679 CYP4A11Q02928 519 aa15.84■□□□□ 0.13
SHROOM1-203ENST00000378679 SEPT2Q15019 361 aa15.84■□□□□ 0.13
SHROOM1-203ENST00000378679 MCTP2Q6DN12 878 aa15.84■□□□□ 0.13
SHROOM1-203ENST00000378679 LEKR1Q6ZMV7 388 aa15.84■□□□□ 0.13
SHROOM1-203ENST00000378679 TMEM179Q6ZVK1 233 aa15.84■□□□□ 0.13
SHROOM1-203ENST00000378679 TRIML1Q8N9V2 468 aa15.84■□□□□ 0.13
SHROOM1-203ENST00000378679 RNF216Q9NWF9 866 aaPredicted RBP15.84■□□□□ 0.13
SHROOM1-203ENST00000378679 PUF60Q9UHX1 559 aaKnown RBP15.84■□□□□ 0.13
SHROOM1-203ENST00000378679 SRPRBQ9Y5M8 271 aaKnown RBP15.84■□□□□ 0.13
SHROOM1-203ENST00000378679 NRXN3Q9Y4C0 1643 aa15.83■□□□□ 0.13
SHROOM1-203ENST00000378679 CCDC169A6NNP5 214 aa15.83■□□□□ 0.13
SHROOM1-203ENST00000378679 KIF5AQ12840 1032 aa15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms