RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 CHD4Q14839 1912 aa15.93■□□□□ 0.14
CLCNKA-202ENST00000375692 SLC5A1P13866 664 aa15.92■□□□□ 0.14
CLCNKA-202ENST00000375692 FECHP22830 423 aa15.92■□□□□ 0.14
CLCNKA-202ENST00000375692 COPB1P53618 953 aaKnown RBP15.92■□□□□ 0.14
CLCNKA-202ENST00000375692 SEC23AQ15436 765 aa15.92■□□□□ 0.14
CLCNKA-202ENST00000375692 CCDC152Q4G0S7 254 aa15.92■□□□□ 0.14
CLCNKA-202ENST00000375692 CT47A1Q5JQC4 288 aaPredicted RBP15.92■□□□□ 0.14
CLCNKA-202ENST00000375692 ADGRA1Q86SQ6 560 aa15.92■□□□□ 0.14
CLCNKA-202ENST00000375692 CCDC51Q96ER9 411 aa15.92■□□□□ 0.14
CLCNKA-202ENST00000375692 CWC15Q9P013 229 aaKnown RBP15.92■□□□□ 0.14
CLCNKA-202ENST00000375692 LIMA1Q9UHB6 759 aaKnown RBP15.92■□□□□ 0.14
CLCNKA-202ENST00000375692 MYO6Q9UM54 1294 aa15.92■□□□□ 0.14
CLCNKA-202ENST00000375692 CYP2D7A0A087X1C5 515 aa15.92■□□□□ 0.14
CLCNKA-202ENST00000375692 SEMA3EO15041 775 aa15.92■□□□□ 0.14
CLCNKA-202ENST00000375692 EIF3JO75822 258 aaKnown RBP15.92■□□□□ 0.14
CLCNKA-202ENST00000375692 EZH2Q15910 746 aaKnown RBP15.92■□□□□ 0.14
CLCNKA-202ENST00000375692 CYP26C1Q6V0L0 522 aa15.92■□□□□ 0.14
CLCNKA-202ENST00000375692 TPTE2Q6XPS3 522 aa15.92■□□□□ 0.14
CLCNKA-202ENST00000375692 SLC51AQ86UW1 340 aa15.92■□□□□ 0.14
CLCNKA-202ENST00000375692 REXO2Q9Y3B8 237 aaKnown RBP15.92■□□□□ 0.14
CLCNKA-202ENST00000375692 BAZ2BQ9UIF8 2168 aaKnown RBP15.92■□□□□ 0.14
CLCNKA-202ENST00000375692 FUT2Q10981 343 aa15.91■□□□□ 0.14
CLCNKA-202ENST00000375692 TUBB2AQ13885 445 aa15.91■□□□□ 0.14
CLCNKA-202ENST00000375692 WHAMMP3Q1A5X7 153 aa15.91■□□□□ 0.14
CLCNKA-202ENST00000375692 COL23A1Q86Y22 540 aaPredicted RBP15.91■□□□□ 0.14
CLCNKA-202ENST00000375692 TUBB2BQ9BVA1 445 aa15.91■□□□□ 0.14
CLCNKA-202ENST00000375692 TSPYL1Q9H0U9 437 aa15.91■□□□□ 0.14
CLCNKA-202ENST00000375692 LRP2BPQ9P2M1 347 aa15.91■□□□□ 0.14
CLCNKA-202ENST00000375692 ITIH6Q6UXX5 1313 aa15.91■□□□□ 0.14
CLCNKA-202ENST00000375692 ADAMTS3O15072 1205 aa15.91■□□□□ 0.14
CLCNKA-202ENST00000375692 XBP1P17861 261 aa15.91■□□□□ 0.14
CLCNKA-202ENST00000375692 AMPD2Q01433 879 aa15.91■□□□□ 0.14
CLCNKA-202ENST00000375692 TTC38Q5R3I4 469 aa15.91■□□□□ 0.14
CLCNKA-202ENST00000375692 LEKR1Q6ZMV7 388 aa15.91■□□□□ 0.14
CLCNKA-202ENST00000375692 ENAHQ8N8S7 591 aaPredicted RBP15.91■□□□□ 0.14
CLCNKA-202ENST00000375692 FERMT2Q96AC1 680 aa15.91■□□□□ 0.14
CLCNKA-202ENST00000375692 RRP15Q9Y3B9 282 aaKnown RBP15.91■□□□□ 0.14
CLCNKA-202ENST00000375692 MROH5Q6ZUA9 1318 aa15.9■□□□□ 0.14
CLCNKA-202ENST00000375692 LRRC10BA6NIK2 292 aa15.9■□□□□ 0.14
CLCNKA-202ENST00000375692 KCNJ18B7U540 433 aa15.9■□□□□ 0.14
CLCNKA-202ENST00000375692 ADRA2BP18089 450 aa15.9■□□□□ 0.14
CLCNKA-202ENST00000375692 KCNJ12Q14500 433 aa15.9■□□□□ 0.14
CLCNKA-202ENST00000375692 IL17AQ16552 155 aa15.9■□□□□ 0.14
CLCNKA-202ENST00000375692 TCP11X2Q5H9J9 407 aa15.9■□□□□ 0.14
CLCNKA-202ENST00000375692 SRLQ86TD4 932 aa15.9■□□□□ 0.14
CLCNKA-202ENST00000375692 NELFBQ8WX92 580 aa15.9■□□□□ 0.14
CLCNKA-202ENST00000375692 AKT1S1Q96B36 256 aa15.9■□□□□ 0.14
CLCNKA-202ENST00000375692 RASSF4Q9H2L5 321 aa15.9■□□□□ 0.14
CLCNKA-202ENST00000375692 GDAQ9Y2T3 454 aa15.9■□□□□ 0.14
CLCNKA-202ENST00000375692 MYH3P11055 1940 aa15.9■□□□□ 0.14
CLCNKA-202ENST00000375692 SRGAP2O75044 1071 aa15.9■□□□□ 0.14
CLCNKA-202ENST00000375692 GNAT2P19087 354 aa15.9■□□□□ 0.14
CLCNKA-202ENST00000375692 UBXN1Q04323 297 aa15.9■□□□□ 0.14
CLCNKA-202ENST00000375692 NPY5RQ15761 445 aa15.9■□□□□ 0.14
CLCNKA-202ENST00000375692 E2F4Q16254 413 aa15.9■□□□□ 0.14
CLCNKA-202ENST00000375692 CELF1Q92879 486 aaKnown RBP15.9■□□□□ 0.14
CLCNKA-202ENST00000375692 RNF41Q9H4P4 317 aaPredicted RBP15.9■□□□□ 0.14
CLCNKA-202ENST00000375692 EPN1Q9Y6I3 576 aaPredicted RBP15.9■□□□□ 0.14
CLCNKA-202ENST00000375692 TAF1P21675 1872 aa15.9■□□□□ 0.14
CLCNKA-202ENST00000375692 SCN7AQ01118 1682 aa15.9■□□□□ 0.14
CLCNKA-202ENST00000375692 UBR3Q6ZT12 1888 aa15.9■□□□□ 0.14
CLCNKA-202ENST00000375692 PNPLA7Q6ZV29 1317 aa15.89■□□□□ 0.14
CLCNKA-202ENST00000375692 VEGFAP15692 232 aaPredicted RBP15.89■□□□□ 0.13
CLCNKA-202ENST00000375692 CYP7A1P22680 504 aa15.89■□□□□ 0.13
CLCNKA-202ENST00000375692 PAK1Q13153 545 aa15.89■□□□□ 0.13
CLCNKA-202ENST00000375692 SLC10A5Q5PT55 438 aa15.89■□□□□ 0.13
CLCNKA-202ENST00000375692 GDAP1L1Q96MZ0 367 aa15.89■□□□□ 0.13
CLCNKA-202ENST00000375692 RWDD2AQ9UIY3 292 aa15.89■□□□□ 0.13
CLCNKA-202ENST00000375692 PRPF3O43395 683 aaKnown RBP15.89■□□□□ 0.13
CLCNKA-202ENST00000375692 HSP90B2PQ58FF3 399 aa15.89■□□□□ 0.13
CLCNKA-202ENST00000375692 PDXDC2PQ6P474 469 aa15.89■□□□□ 0.13
CLCNKA-202ENST00000375692 DEFB132Q7Z7B7 95 aa15.89■□□□□ 0.13
CLCNKA-202ENST00000375692 IQUBQ8NA54 791 aa15.89■□□□□ 0.13
CLCNKA-202ENST00000375692 ESR2Q92731 530 aa15.89■□□□□ 0.13
CLCNKA-202ENST00000375692 TNFRSF25Q93038 417 aa15.89■□□□□ 0.13
CLCNKA-202ENST00000375692 PLEKHA4Q9H4M7 779 aa15.89■□□□□ 0.13
CLCNKA-202ENST00000375692 ABCF2Q9UG63 623 aa15.89■□□□□ 0.13
CLCNKA-202ENST00000375692 RSPH14Q9UHP6 348 aa15.89■□□□□ 0.13
CLCNKA-202ENST00000375692 MYH6P13533 1939 aa15.89■□□□□ 0.13
CLCNKA-202ENST00000375692 TTC26A0AVF1 554 aa15.88■□□□□ 0.13
CLCNKA-202ENST00000375692 TRIM49BA6NDI0 452 aa15.88■□□□□ 0.13
CLCNKA-202ENST00000375692 NDUFA10O95299 355 aa15.88■□□□□ 0.13
CLCNKA-202ENST00000375692 MCM7P33993 719 aa15.88■□□□□ 0.13
CLCNKA-202ENST00000375692 DDR1Q08345 913 aa15.88■□□□□ 0.13
CLCNKA-202ENST00000375692 SF3B3Q15393 1217 aaKnown RBP15.88■□□□□ 0.13
CLCNKA-202ENST00000375692 NLRP3Q96P20 1036 aa15.88■□□□□ 0.13
CLCNKA-202ENST00000375692 ZSCAN10Q96SZ4 725 aaPredicted RBP15.88■□□□□ 0.13
CLCNKA-202ENST00000375692 NYXQ9GZU5 481 aa15.88■□□□□ 0.13
CLCNKA-202ENST00000375692 ANKRD65E5RJM6 399 aa15.88■□□□□ 0.13
CLCNKA-202ENST00000375692 PES1O00541 588 aaKnown RBP15.88■□□□□ 0.13
CLCNKA-202ENST00000375692 RGL2O15211 777 aa15.88■□□□□ 0.13
CLCNKA-202ENST00000375692 ZMYND10O75800 440 aa15.88■□□□□ 0.13
CLCNKA-202ENST00000375692 PRCPP42785 496 aa15.88■□□□□ 0.13
CLCNKA-202ENST00000375692 ATP2C1P98194 919 aaPredicted RBP15.88■□□□□ 0.13
CLCNKA-202ENST00000375692 IFIT1BQ5T764 474 aaKnown RBP15.88■□□□□ 0.13
CLCNKA-202ENST00000375692 PIK3AP1Q6ZUJ8 805 aa15.88■□□□□ 0.13
CLCNKA-202ENST00000375692 MMS19Q96T76 1030 aa15.88■□□□□ 0.13
CLCNKA-202ENST00000375692 FAM204AQ9H8W3 233 aa15.88■□□□□ 0.13
CLCNKA-202ENST00000375692 ATP1A1P05023 1023 aaKnown RBP15.87■□□□□ 0.13
CLCNKA-202ENST00000375692 TM4SF1P30408 202 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms