RNA–Protein interactions for RNA: ENST00000360212.6

CD46-206, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-206ENST00000360212 SIGLEC1Q9BZZ2 1709 aa9.61□□□□□ -0.87
CD46-206ENST00000360212 PIK3C2BO00750 1634 aa9.61□□□□□ -0.87
CD46-206ENST00000360212 A0A087WZG4 1122 aa9.61□□□□□ -0.87
CD46-206ENST00000360212 ANKRD18BA2A2Z9 1011 aa9.61□□□□□ -0.87
CD46-206ENST00000360212 BUB1O43683 1085 aa9.61□□□□□ -0.87
CD46-206ENST00000360212 KRT86O43790 486 aa9.61□□□□□ -0.87
CD46-206ENST00000360212 GLI1P08151 1106 aa9.61□□□□□ -0.87
CD46-206ENST00000360212 HOXC9P31274 260 aa9.61□□□□□ -0.87
CD46-206ENST00000360212 GCKRQ14397 625 aa9.61□□□□□ -0.87
CD46-206ENST00000360212 LRRC24Q50LG9 513 aa9.61□□□□□ -0.87
CD46-206ENST00000360212 C1QTNF12Q5T7M4 302 aa9.61□□□□□ -0.87
CD46-206ENST00000360212 C8orf74Q6P047 294 aa9.61□□□□□ -0.87
CD46-206ENST00000360212 OR8K1Q8NGG5 319 aa9.61□□□□□ -0.87
CD46-206ENST00000360212 NUP133Q8WUM0 1156 aa9.61□□□□□ -0.87
CD46-206ENST00000360212 LMBR1Q8WVP7 490 aa9.61□□□□□ -0.87
CD46-206ENST00000360212 HAUS4Q9H6D7 363 aa9.61□□□□□ -0.87
CD46-206ENST00000360212 UBN2Q6ZU65 1347 aa9.6□□□□□ -0.87
CD46-206ENST00000360212 TARSL2A2RTX5 802 aaKnown RBP9.6□□□□□ -0.87
CD46-206ENST00000360212 NEURL1BA8MQ27 555 aa9.6□□□□□ -0.87
CD46-206ENST00000360212 PPP1R3GB7ZBB8 358 aa9.6□□□□□ -0.87
CD46-206ENST00000360212 COQ9O75208 318 aa9.6□□□□□ -0.87
CD46-206ENST00000360212 TRIM21P19474 475 aaKnown RBP9.6□□□□□ -0.87
CD46-206ENST00000360212 MRPL12P52815 198 aaKnown RBP9.6□□□□□ -0.87
CD46-206ENST00000360212 CUL4BQ13620 913 aa9.6□□□□□ -0.87
CD46-206ENST00000360212 HLTFQ14527 1009 aaKnown RBP eCLIP9.6□□□□□ -0.872e-6■■□□□ 13.6
CD46-206ENST00000360212 ENOX2Q16206 610 aaKnown RBP9.6□□□□□ -0.87
CD46-206ENST00000360212 HLFQ16534 295 aa9.6□□□□□ -0.87
CD46-206ENST00000360212 WLSQ5T9L3 541 aa9.6□□□□□ -0.87
CD46-206ENST00000360212 MSL1Q68DK7 614 aa9.6□□□□□ -0.87
CD46-206ENST00000360212 MB21D2Q8IYB1 491 aaPredicted RBP9.6□□□□□ -0.87
CD46-206ENST00000360212 RPUSD2Q8IZ73 545 aaKnown RBP9.6□□□□□ -0.87
CD46-206ENST00000360212 RASSF8Q8NHQ8 419 aa9.6□□□□□ -0.87
CD46-206ENST00000360212 PAGE5Q96GU1 130 aa9.6□□□□□ -0.87
CD46-206ENST00000360212 CTAGE1Q96RT6 745 aa9.6□□□□□ -0.87
CD46-206ENST00000360212 MYO1AQ9UBC5 1043 aa9.6□□□□□ -0.87
CD46-206ENST00000360212 CHD2O14647 1828 aaKnown RBP9.6□□□□□ -0.87
CD46-206ENST00000360212 ZBTB43O43298 467 aa9.6□□□□□ -0.87
CD46-206ENST00000360212 DDX58O95786 925 aaKnown RBP9.6□□□□□ -0.87
CD46-206ENST00000360212 ERCC5P28715 1186 aaPredicted RBP9.6□□□□□ -0.87
CD46-206ENST00000360212 SAFBQ15424 915 aaKnown RBP eCLIP9.6□□□□□ -0.876e-6■□□□□ 10.7
CD46-206ENST00000360212 CDKAL1Q5VV42 579 aa9.6□□□□□ -0.87
CD46-206ENST00000360212 WDR59Q6PJI9 974 aa9.6□□□□□ -0.87
CD46-206ENST00000360212 TMC4Q7Z404 712 aa9.6□□□□□ -0.87
CD46-206ENST00000360212 TBC1D1Q86TI0 1168 aaPredicted RBP9.6□□□□□ -0.87
CD46-206ENST00000360212 CREG2Q8IUH2 290 aa9.6□□□□□ -0.87
CD46-206ENST00000360212 SYMPKQ92797 1274 aaKnown RBP9.6□□□□□ -0.87
CD46-206ENST00000360212 UBAC1Q9BSL1 405 aa9.6□□□□□ -0.87
CD46-206ENST00000360212 HELLSQ9NRZ9 838 aa9.6□□□□□ -0.87
CD46-206ENST00000360212 PXDNLA1KZ92 1463 aa9.6□□□□□ -0.87
CD46-206ENST00000360212 KIDINS220Q9ULH0 1771 aa9.6□□□□□ -0.87
CD46-206ENST00000360212 SH3TC1Q8TE82 1336 aa9.6□□□□□ -0.87
CD46-206ENST00000360212 B4DLN1 442 aa9.59□□□□□ -0.87
CD46-206ENST00000360212 FOXP2O15409 715 aa9.59□□□□□ -0.87
CD46-206ENST00000360212 ECEL1O95672 775 aa9.59□□□□□ -0.87
CD46-206ENST00000360212 MDH1P40925 334 aaKnown RBP9.59□□□□□ -0.87
CD46-206ENST00000360212 MTA1Q13330 715 aa9.59□□□□□ -0.87
CD46-206ENST00000360212 ZNF174Q15697 407 aa9.59□□□□□ -0.87
CD46-206ENST00000360212 PAPD7Q5XG87 772 aaKnown RBP9.59□□□□□ -0.87
CD46-206ENST00000360212 APOA5Q6Q788 366 aa9.59□□□□□ -0.87
CD46-206ENST00000360212 NELFBQ8WX92 580 aa9.59□□□□□ -0.87
CD46-206ENST00000360212 RSRC1Q96IZ7 334 aaKnown RBP9.59□□□□□ -0.87
CD46-206ENST00000360212 STIM2Q9P246 746 aa9.59□□□□□ -0.87
CD46-206ENST00000360212 PACSIN2Q9UNF0 486 aaPredicted RBP9.59□□□□□ -0.87
CD46-206ENST00000360212 WNT7AO00755 349 aa9.59□□□□□ -0.87
CD46-206ENST00000360212 PRDM1O75626 825 aa9.59□□□□□ -0.87
CD46-206ENST00000360212 PYGLP06737 847 aa9.59□□□□□ -0.87
CD46-206ENST00000360212 PTPREP23469 700 aa9.59□□□□□ -0.87
CD46-206ENST00000360212 SCTRP47872 440 aa9.59□□□□□ -0.87
CD46-206ENST00000360212 VAV2P52735 878 aa9.59□□□□□ -0.87
CD46-206ENST00000360212 TBC1D25Q3MII6 688 aa9.59□□□□□ -0.87
CD46-206ENST00000360212 FAM133BQ5BKY9 247 aaKnown RBP9.59□□□□□ -0.87
CD46-206ENST00000360212 TYW1BQ6NUM6 668 aa9.59□□□□□ -0.87
CD46-206ENST00000360212 TBC1D10CQ8IV04 446 aa9.59□□□□□ -0.87
CD46-206ENST00000360212 KLHL7Q8IXQ5 586 aa9.59□□□□□ -0.87
CD46-206ENST00000360212 MDM1Q8TC05 714 aa9.59□□□□□ -0.87
CD46-206ENST00000360212 PUS3Q9BZE2 481 aaKnown RBP9.59□□□□□ -0.87
CD46-206ENST00000360212 NHEJ1Q9H9Q4 299 aaPredicted RBP9.59□□□□□ -0.87
CD46-206ENST00000360212 ANGEL1Q9UNK9 670 aaKnown RBP9.59□□□□□ -0.87
CD46-206ENST00000360212 MYO5BQ9ULV0 1848 aa9.59□□□□□ -0.87
CD46-206ENST00000360212 HEXIM1O94992 359 aaKnown RBP9.59□□□□□ -0.87
CD46-206ENST00000360212 ADORA1P30542 326 aa9.59□□□□□ -0.87
CD46-206ENST00000360212 EPHB4P54760 987 aa9.59□□□□□ -0.87
CD46-206ENST00000360212 SKOR1P84550 965 aa9.59□□□□□ -0.87
CD46-206ENST00000360212 KIF5AQ12840 1032 aa9.59□□□□□ -0.87
CD46-206ENST00000360212 SCARF1Q14162 830 aa9.59□□□□□ -0.87
CD46-206ENST00000360212 TCP11X2Q5H9J9 407 aa9.59□□□□□ -0.87
CD46-206ENST00000360212 HAUS3Q68CZ6 603 aa9.59□□□□□ -0.87
CD46-206ENST00000360212 CPLX4Q7Z7G2 160 aa9.59□□□□□ -0.87
CD46-206ENST00000360212 ABTB2Q8N961 1025 aa9.59□□□□□ -0.87
CD46-206ENST00000360212 NOD2Q9HC29 1040 aa9.59□□□□□ -0.87
CD46-206ENST00000360212 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.59□□□□□ -0.87
CD46-206ENST00000360212 BIN2Q9UBW5 565 aaPredicted RBP9.59□□□□□ -0.87
CD46-206ENST00000360212 LEMD3Q9Y2U8 911 aa9.59□□□□□ -0.87
CD46-206ENST00000360212 NRKQ7Z2Y5 1582 aa9.59□□□□□ -0.87
CD46-206ENST00000360212 FAM208AQ9UK61 1670 aaKnown RBP9.59□□□□□ -0.87
CD46-206ENST00000360212 PEAK1Q9H792 1746 aa9.58□□□□□ -0.88
CD46-206ENST00000360212 TMCO5BA8MYB1 307 aa9.58□□□□□ -0.88
CD46-206ENST00000360212 DCDC2CA8MYV0 355 aa9.58□□□□□ -0.88
CD46-206ENST00000360212 NKRFO15226 690 aaKnown RBP eCLIP9.58□□□□□ -0.88
CD46-206ENST00000360212 FAM107AO95990 144 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms