RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 A0A1W2PQ64 194 aa17.63■□□□□ 0.41
USP42-201ENST00000306177 A0A1W2PQD8 194 aa17.63■□□□□ 0.41
USP42-201ENST00000306177 ERFEQ4G0M1 354 aa17.63■□□□□ 0.41
USP42-201ENST00000306177 CNKSR1Q969H4 720 aa17.63■□□□□ 0.41
USP42-201ENST00000306177 RTEL1Q9NZ71 1219 aa17.63■□□□□ 0.41
USP42-201ENST00000306177 DDX25Q9UHL0 483 aaKnown RBP17.63■□□□□ 0.41
USP42-201ENST00000306177 CLIC4Q9Y696 253 aa17.63■□□□□ 0.41
USP42-201ENST00000306177 NDUFA8P51970 172 aa17.62■□□□□ 0.41
USP42-201ENST00000306177 KCNQ4P56696 695 aa17.62■□□□□ 0.41
USP42-201ENST00000306177 UAP1Q16222 522 aaPredicted RBP17.62■□□□□ 0.41
USP42-201ENST00000306177 GPIHBP1Q8IV16 184 aa17.62■□□□□ 0.41
USP42-201ENST00000306177 CCDC117Q8IWD4 279 aaPredicted RBP17.62■□□□□ 0.41
USP42-201ENST00000306177 HPDP32754 393 aaPredicted RBP17.62■□□□□ 0.41
USP42-201ENST00000306177 DAAM2Q86T65 1068 aa17.62■□□□□ 0.41
USP42-201ENST00000306177 GPT2Q8TD30 523 aa17.62■□□□□ 0.41
USP42-201ENST00000306177 RNF34Q969K3 372 aa17.62■□□□□ 0.41
USP42-201ENST00000306177 M0R2C6 588 aa17.62■□□□□ 0.41
USP42-201ENST00000306177 CYP27B1O15528 508 aa17.62■□□□□ 0.41
USP42-201ENST00000306177 ARHGAP44Q17R89 818 aa17.62■□□□□ 0.41
USP42-201ENST00000306177 FAM182BQ5T319 152 aa17.62■□□□□ 0.41
USP42-201ENST00000306177 CROCCP2Q86T23 111 aa17.62■□□□□ 0.41
USP42-201ENST00000306177 CLIC6Q96NY7 704 aa17.62■□□□□ 0.41
USP42-201ENST00000306177 CD19P15391 556 aa17.62■□□□□ 0.41
USP42-201ENST00000306177 POLA2Q14181 598 aa17.62■□□□□ 0.41
USP42-201ENST00000306177 ASIC3Q9UHC3 531 aa17.62■□□□□ 0.41
USP42-201ENST00000306177 PAK2Q13177 524 aa17.61■□□□□ 0.41
USP42-201ENST00000306177 PTGDRQ13258 359 aa17.61■□□□□ 0.41
USP42-201ENST00000306177 ARHGEF16Q5VV41 709 aa17.61■□□□□ 0.41
USP42-201ENST00000306177 SLFN13Q68D06 897 aa17.61■□□□□ 0.41
USP42-201ENST00000306177 APOA5Q6Q788 366 aa17.61■□□□□ 0.41
USP42-201ENST00000306177 KLHL7Q8IXQ5 586 aa17.61■□□□□ 0.41
USP42-201ENST00000306177 RNF26Q9BY78 433 aaPredicted RBP17.61■□□□□ 0.41
USP42-201ENST00000306177 TRIM31Q9BZY9 425 aa17.61■□□□□ 0.41
USP42-201ENST00000306177 PNMA2Q9UL42 364 aa17.61■□□□□ 0.41
USP42-201ENST00000306177 NCAPD2Q15021 1401 aa17.61■□□□□ 0.41
USP42-201ENST00000306177 TESPA1A2RU30 521 aaPredicted RBP17.61■□□□□ 0.41
USP42-201ENST00000306177 TNNI1P19237 187 aa17.61■□□□□ 0.41
USP42-201ENST00000306177 CFAP157Q5JU67 520 aa17.61■□□□□ 0.41
USP42-201ENST00000306177 DCAF15Q66K64 600 aa17.61■□□□□ 0.41
USP42-201ENST00000306177 PI16Q6UXB8 463 aa17.61■□□□□ 0.41
USP42-201ENST00000306177 GOLGA5Q8TBA6 731 aa17.61■□□□□ 0.41
USP42-201ENST00000306177 PSMB7Q99436 277 aa17.61■□□□□ 0.41
USP42-201ENST00000306177 ALKQ9UM73 1620 aa17.61■□□□□ 0.41
USP42-201ENST00000306177 TCP10L2B9ZVM9 353 aa17.61■□□□□ 0.41
USP42-201ENST00000306177 KRT19P08727 400 aa17.61■□□□□ 0.41
USP42-201ENST00000306177 ALAS1P13196 640 aa17.61■□□□□ 0.41
USP42-201ENST00000306177 ADD2P35612 726 aa17.61■□□□□ 0.41
USP42-201ENST00000306177 STAT1P42224 750 aa17.61■□□□□ 0.41
USP42-201ENST00000306177 RDH13Q8NBN7 331 aa17.61■□□□□ 0.41
USP42-201ENST00000306177 SYMPKQ92797 1274 aaKnown RBP17.61■□□□□ 0.41
USP42-201ENST00000306177 MRFAP1L1Q96HT8 127 aa17.61■□□□□ 0.41
USP42-201ENST00000306177 FOXP1Q9H334 677 aaPredicted RBP17.61■□□□□ 0.41
USP42-201ENST00000306177 CSADQ9Y600 493 aa17.61■□□□□ 0.41
USP42-201ENST00000306177 SPHKAPQ2M3C7 1700 aa17.61■□□□□ 0.41
USP42-201ENST00000306177 MCF2L2Q86YR7 1114 aa17.61■□□□□ 0.41
USP42-201ENST00000306177 DEPTORQ8TB45 409 aa17.61■□□□□ 0.41
USP42-201ENST00000306177 RPGRIP1Q96KN7 1286 aa17.61■□□□□ 0.41
USP42-201ENST00000306177 PANK4Q9NVE7 773 aa17.61■□□□□ 0.41
USP42-201ENST00000306177 USTQ9Y2C2 406 aa17.61■□□□□ 0.41
USP42-201ENST00000306177 GLG1Q92896 1179 aa17.6■□□□□ 0.41
USP42-201ENST00000306177 A6NNZ2 444 aa17.6■□□□□ 0.41
USP42-201ENST00000306177 DAPK3O43293 454 aa17.6■□□□□ 0.41
USP42-201ENST00000306177 STK10O94804 968 aaKnown RBP17.6■□□□□ 0.41
USP42-201ENST00000306177 SASH1O94885 1247 aa17.6■□□□□ 0.41
USP42-201ENST00000306177 RPN1P04843 607 aaKnown RBP17.6■□□□□ 0.41
USP42-201ENST00000306177 SERPINB2P05120 415 aa17.6■□□□□ 0.41
USP42-201ENST00000306177 ZNF827Q17R98 1081 aa17.6■□□□□ 0.41
USP42-201ENST00000306177 TUBB8Q3ZCM7 444 aa17.6■□□□□ 0.41
USP42-201ENST00000306177 RUFY4Q6ZNE9 571 aa17.6■□□□□ 0.41
USP42-201ENST00000306177 CARMIL3Q8ND23 1372 aa17.6■□□□□ 0.41
USP42-201ENST00000306177 TRIM37O94972 964 aa17.6■□□□□ 0.41
USP42-201ENST00000306177 FMNL1O95466 1100 aaPredicted RBP17.6■□□□□ 0.41
USP42-201ENST00000306177 CYP2J2P51589 502 aa17.6■□□□□ 0.41
USP42-201ENST00000306177 SPATA1Q5VX52 437 aa17.6■□□□□ 0.41
USP42-201ENST00000306177 ARMCX3Q9UH62 379 aaPredicted RBP17.6■□□□□ 0.41
USP42-201ENST00000306177 BCS1LQ9Y276 419 aa17.6■□□□□ 0.41
USP42-201ENST00000306177 GOLGA6CA6NDK9 693 aa17.6■□□□□ 0.41
USP42-201ENST00000306177 PPP6R2O75170 966 aa17.6■□□□□ 0.41
USP42-201ENST00000306177 VIMP08670 466 aaKnown RBP17.6■□□□□ 0.41
USP42-201ENST00000306177 GOLGA6DP0CG33 693 aa17.6■□□□□ 0.41
USP42-201ENST00000306177 TRAPPC10P48553 1259 aa17.6■□□□□ 0.41
USP42-201ENST00000306177 SLC39A14Q15043 492 aa17.6■□□□□ 0.41
USP42-201ENST00000306177 FAM102BQ5T8I3 360 aa17.6■□□□□ 0.41
USP42-201ENST00000306177 CCDC17Q96LX7 622 aa17.6■□□□□ 0.41
USP42-201ENST00000306177 MAGEF1Q9HAY2 307 aa17.6■□□□□ 0.41
USP42-201ENST00000306177 GOLGA6AQ9NYA3 693 aa17.6■□□□□ 0.41
USP42-201ENST00000306177 PPEF1O14829 653 aaPredicted RBP17.59■□□□□ 0.41
USP42-201ENST00000306177 RASA3Q14644 834 aa17.59■□□□□ 0.41
USP42-201ENST00000306177 PPP1R21Q6ZMI0 780 aa17.59■□□□□ 0.41
USP42-201ENST00000306177 TMC4Q7Z404 712 aa17.59■□□□□ 0.41
USP42-201ENST00000306177 TRIM58Q8NG06 486 aa17.59■□□□□ 0.41
USP42-201ENST00000306177 SWAP70Q9UH65 585 aa17.59■□□□□ 0.41
USP42-201ENST00000306177 SAR1BQ9Y6B6 198 aa17.59■□□□□ 0.41
USP42-201ENST00000306177 YWHAEP62258 255 aaKnown RBP17.59■□□□□ 0.41
USP42-201ENST00000306177 MAP7D1Q3KQU3 841 aa17.59■□□□□ 0.41
USP42-201ENST00000306177 NSUN7Q8NE18 718 aaKnown RBP17.59■□□□□ 0.41
USP42-201ENST00000306177 MAIP1Q8WWC4 291 aa17.59■□□□□ 0.41
USP42-201ENST00000306177 PRPF6O94906 941 aaKnown RBP17.59■□□□□ 0.41
USP42-201ENST00000306177 FOSP01100 380 aaPredicted RBP17.59■□□□□ 0.41
USP42-201ENST00000306177 FANCLQ9NW38 375 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms