RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 TECP42680 631 aa14.91□□□□□ -0.02
TNFRSF21-201ENST00000296861 KCNJ6P48051 423 aa14.91□□□□□ -0.02
TNFRSF21-201ENST00000296861 LRRC41Q15345 812 aa14.91□□□□□ -0.02
TNFRSF21-201ENST00000296861 ZNF444Q8N0Y2 327 aaPredicted RBP14.91□□□□□ -0.02
TNFRSF21-201ENST00000296861 AFAP1L1Q8TED9 768 aa14.91□□□□□ -0.02
TNFRSF21-201ENST00000296861 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.91□□□□□ -0.02
TNFRSF21-201ENST00000296861 GSDMAQ96QA5 445 aa14.91□□□□□ -0.02
TNFRSF21-201ENST00000296861 PANX2Q96RD6 677 aa14.91□□□□□ -0.02
TNFRSF21-201ENST00000296861 RGPD5Q99666 1765 aa14.91□□□□□ -0.02
TNFRSF21-201ENST00000296861 USP17L3A6NCW0 530 aa14.91□□□□□ -0.02
TNFRSF21-201ENST00000296861 USP17L4A6NCW7 530 aa14.91□□□□□ -0.02
TNFRSF21-201ENST00000296861 LRRIQ3A6PVS8 624 aaPredicted RBP14.91□□□□□ -0.02
TNFRSF21-201ENST00000296861 CSF1RP07333 972 aa14.91□□□□□ -0.02
TNFRSF21-201ENST00000296861 GNAT2P19087 354 aa14.91□□□□□ -0.02
TNFRSF21-201ENST00000296861 LIG3P49916 1009 aa14.91□□□□□ -0.02
TNFRSF21-201ENST00000296861 NAPAP54920 295 aa14.91□□□□□ -0.02
TNFRSF21-201ENST00000296861 SPAG1Q07617 926 aa14.91□□□□□ -0.02
TNFRSF21-201ENST00000296861 TCP11X2Q5H9J9 407 aa14.91□□□□□ -0.02
TNFRSF21-201ENST00000296861 USP17L1Q7RTZ2 530 aa14.91□□□□□ -0.02
TNFRSF21-201ENST00000296861 SRBD1Q8N5C6 995 aaKnown RBP14.91□□□□□ -0.02
TNFRSF21-201ENST00000296861 TRIML1Q8N9V2 468 aa14.91□□□□□ -0.02
TNFRSF21-201ENST00000296861 POTEB2H3BUK9 544 aa14.9□□□□□ -0.02
TNFRSF21-201ENST00000296861 ADAMTS3O15072 1205 aa14.9□□□□□ -0.02
TNFRSF21-201ENST00000296861 TSPY3P0CV98 308 aa14.9□□□□□ -0.02
TNFRSF21-201ENST00000296861 TSPY8P0CW00 308 aa14.9□□□□□ -0.02
TNFRSF21-201ENST00000296861 PRDX5P30044 214 aa14.9□□□□□ -0.02
TNFRSF21-201ENST00000296861 EPS15P42566 896 aa14.9□□□□□ -0.02
TNFRSF21-201ENST00000296861 HLTFQ14527 1009 aaKnown RBP eCLIP14.9□□□□□ -0.02
TNFRSF21-201ENST00000296861 SOGA3Q5TF21 947 aa14.9□□□□□ -0.02
TNFRSF21-201ENST00000296861 STAG2Q8N3U4 1231 aa14.9□□□□□ -0.02
TNFRSF21-201ENST00000296861 PROCA1Q8NCQ7 364 aaPredicted RBP14.9□□□□□ -0.02
TNFRSF21-201ENST00000296861 FAM53CQ9NYF3 392 aa14.9□□□□□ -0.02
TNFRSF21-201ENST00000296861 ATP8B1O43520 1251 aa14.9□□□□□ -0.02
TNFRSF21-201ENST00000296861 SCG2P13521 617 aa14.9□□□□□ -0.02
TNFRSF21-201ENST00000296861 CYLC1P35663 651 aaPredicted RBP14.9□□□□□ -0.02
TNFRSF21-201ENST00000296861 GOLGA5Q8TBA6 731 aa14.9□□□□□ -0.02
TNFRSF21-201ENST00000296861 UBA5Q9GZZ9 404 aa14.9□□□□□ -0.02
TNFRSF21-201ENST00000296861 MED1Q15648 1581 aaPredicted RBP14.9□□□□□ -0.02
TNFRSF21-201ENST00000296861 PPP1R3GB7ZBB8 358 aa14.9□□□□□ -0.02
TNFRSF21-201ENST00000296861 F8W031 263 aaPredicted RBP14.9□□□□□ -0.02
TNFRSF21-201ENST00000296861 CCT5P48643 541 aa14.9□□□□□ -0.02
TNFRSF21-201ENST00000296861 GUCY2FP51841 1108 aa14.9□□□□□ -0.02
TNFRSF21-201ENST00000296861 E2F4Q16254 413 aa14.9□□□□□ -0.02
TNFRSF21-201ENST00000296861 BEND6Q5SZJ8 279 aaPredicted RBP14.9□□□□□ -0.02
TNFRSF21-201ENST00000296861 SPTY2D1Q68D10 685 aaPredicted RBP14.9□□□□□ -0.02
TNFRSF21-201ENST00000296861 RSRC2Q7L4I2 434 aaKnown RBP14.9□□□□□ -0.02
TNFRSF21-201ENST00000296861 SECISBP2LQ93073 1101 aaKnown RBP14.9□□□□□ -0.02
TNFRSF21-201ENST00000296861 FERMT2Q96AC1 680 aa14.9□□□□□ -0.02
TNFRSF21-201ENST00000296861 RNF26Q9BY78 433 aaPredicted RBP14.9□□□□□ -0.02
TNFRSF21-201ENST00000296861 LRWD1Q9UFC0 647 aa14.9□□□□□ -0.02
TNFRSF21-201ENST00000296861 RTL9Q8NET4 1388 aa14.9□□□□□ -0.02
TNFRSF21-201ENST00000296861 PMS1P54277 932 aaKnown RBP14.89□□□□□ -0.03
TNFRSF21-201ENST00000296861 TBX2Q13207 712 aaPredicted RBP14.89□□□□□ -0.03
TNFRSF21-201ENST00000296861 MAP9Q49MG5 647 aa14.89□□□□□ -0.03
TNFRSF21-201ENST00000296861 KCND1Q9NSA2 647 aa14.89□□□□□ -0.03
TNFRSF21-201ENST00000296861 XDHP47989 1333 aa14.89□□□□□ -0.03
TNFRSF21-201ENST00000296861 MROH5Q6ZUA9 1318 aa14.89□□□□□ -0.03
TNFRSF21-201ENST00000296861 ESYT3A0FGR9 886 aa14.89□□□□□ -0.03
TNFRSF21-201ENST00000296861 NCK2O43639 380 aa14.89□□□□□ -0.03
TNFRSF21-201ENST00000296861 PLEKP08567 350 aaPredicted RBP14.89□□□□□ -0.03
TNFRSF21-201ENST00000296861 CACNB1Q02641 598 aaPredicted RBP14.89□□□□□ -0.03
TNFRSF21-201ENST00000296861 RNF187Q5TA31 235 aaPredicted RBP14.89□□□□□ -0.03
TNFRSF21-201ENST00000296861 RRAGAQ7L523 313 aa14.89□□□□□ -0.03
TNFRSF21-201ENST00000296861 AMOTL1Q8IY63 956 aa14.89□□□□□ -0.03
TNFRSF21-201ENST00000296861 EXOC4Q96A65 974 aa14.89□□□□□ -0.03
TNFRSF21-201ENST00000296861 TUBGCP2Q9BSJ2 902 aa14.89□□□□□ -0.03
TNFRSF21-201ENST00000296861 MLXIPQ9HAP2 919 aa14.89□□□□□ -0.03
TNFRSF21-201ENST00000296861 KRT18P05783 430 aaKnown RBP14.89□□□□□ -0.03
TNFRSF21-201ENST00000296861 KLRK1P26718 216 aa14.89□□□□□ -0.03
TNFRSF21-201ENST00000296861 TMC4Q7Z404 712 aa14.89□□□□□ -0.03
TNFRSF21-201ENST00000296861 MAPKAPK5Q8IW41 473 aa14.89□□□□□ -0.03
TNFRSF21-201ENST00000296861 CRNKL1Q9BZJ0 848 aaKnown RBP14.89□□□□□ -0.03
TNFRSF21-201ENST00000296861 EHD4Q9H223 541 aa14.89□□□□□ -0.03
TNFRSF21-201ENST00000296861 FCER1AP12319 257 aa14.88□□□□□ -0.03
TNFRSF21-201ENST00000296861 NELFCDQ8IXH7 590 aa14.88□□□□□ -0.03
TNFRSF21-201ENST00000296861 STAG1Q8WVM7 1258 aa14.88□□□□□ -0.03
TNFRSF21-201ENST00000296861 LACRTQ9GZZ8 138 aa14.88□□□□□ -0.03
TNFRSF21-201ENST00000296861 RMND1Q9NWS8 449 aa14.88□□□□□ -0.03
TNFRSF21-201ENST00000296861 BIN2Q9UBW5 565 aaPredicted RBP14.88□□□□□ -0.03
TNFRSF21-201ENST00000296861 GOLGA6CA6NDK9 693 aa14.88□□□□□ -0.03
TNFRSF21-201ENST00000296861 MOCS3O95396 460 aa14.88□□□□□ -0.03
TNFRSF21-201ENST00000296861 GOLGA6DP0CG33 693 aa14.88□□□□□ -0.03
TNFRSF21-201ENST00000296861 HPDP32754 393 aaPredicted RBP14.88□□□□□ -0.03
TNFRSF21-201ENST00000296861 DIXDC1Q155Q3 683 aa14.88□□□□□ -0.03
TNFRSF21-201ENST00000296861 EZH2Q15910 746 aaKnown RBP14.88□□□□□ -0.03
TNFRSF21-201ENST00000296861 NAA15Q9BXJ9 866 aaKnown RBP14.88□□□□□ -0.03
TNFRSF21-201ENST00000296861 GOLGA6AQ9NYA3 693 aa14.88□□□□□ -0.03
TNFRSF21-201ENST00000296861 TCRBV5S4A2TA0A5A2 114 aa14.88□□□□□ -0.03
TNFRSF21-201ENST00000296861 IVLP07476 585 aa14.88□□□□□ -0.03
TNFRSF21-201ENST00000296861 ARID4AP29374 1257 aaPredicted RBP14.88□□□□□ -0.03
TNFRSF21-201ENST00000296861 GGCXP38435 758 aa14.88□□□□□ -0.03
TNFRSF21-201ENST00000296861 GTF2A1P52655 376 aaPredicted RBP14.88□□□□□ -0.03
TNFRSF21-201ENST00000296861 BLIDQ8IZY5 108 aa14.88□□□□□ -0.03
TNFRSF21-201ENST00000296861 GOLGA6BA6NDN3 693 aa14.87□□□□□ -0.03
TNFRSF21-201ENST00000296861 USO1O60763 962 aaKnown RBP14.87□□□□□ -0.03
TNFRSF21-201ENST00000296861 CLSTN1O94985 981 aa14.87□□□□□ -0.03
TNFRSF21-201ENST00000296861 KIF5BP33176 963 aa14.87□□□□□ -0.03
TNFRSF21-201ENST00000296861 MAATS1Q7Z4T9 603 aa14.87□□□□□ -0.03
TNFRSF21-201ENST00000296861 GTPBP6O43824 516 aaPredicted RBP14.87□□□□□ -0.03
TNFRSF21-201ENST00000296861 PAFAH1B1P43034 410 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms