RNA–Protein interactions for RNA: ENST00000564814.1

GINS3-205, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-205ENST00000564814 ZKSCAN3Q9BRR0 538 aa8.73□□□□□ -1.01
GINS3-205ENST00000564814 RNF26Q9BY78 433 aaPredicted RBP8.73□□□□□ -1.01
GINS3-205ENST00000564814 GOPCQ9HD26 462 aa8.73□□□□□ -1.01
GINS3-205ENST00000564814 PICK1Q9NRD5 415 aa8.73□□□□□ -1.01
GINS3-205ENST00000564814 CLIP2Q9UDT6 1046 aa8.73□□□□□ -1.01
GINS3-205ENST00000564814 MAD2L2Q9UI95 211 aa8.73□□□□□ -1.01
GINS3-205ENST00000564814 SCAF8Q9UPN6 1271 aaKnown RBP8.73□□□□□ -1.01
GINS3-205ENST00000564814 AFG3L2Q9Y4W6 797 aa8.73□□□□□ -1.01
GINS3-205ENST00000564814 CSADQ9Y600 493 aa8.73□□□□□ -1.01
GINS3-205ENST00000564814 MYH6P13533 1939 aa8.73□□□□□ -1.01
GINS3-205ENST00000564814 MYPNQ86TC9 1320 aa8.73□□□□□ -1.01
GINS3-205ENST00000564814 A0A0G2JMZ2 1700 aa8.72□□□□□ -1.01
GINS3-205ENST00000564814 RASSF10A6NK89 507 aa8.72□□□□□ -1.01
GINS3-205ENST00000564814 CCDC85CA6NKD9 419 aa8.72□□□□□ -1.01
GINS3-205ENST00000564814 GOLGA8AA7E2F4 631 aa8.72□□□□□ -1.01
GINS3-205ENST00000564814 USP17L10C9JJH3 530 aa8.72□□□□□ -1.01
GINS3-205ENST00000564814 F5H6K3 240 aa8.72□□□□□ -1.01
GINS3-205ENST00000564814 hCG_1984214I3L0E3 225 aa8.72□□□□□ -1.01
GINS3-205ENST00000564814 TRAF5O00463 557 aa8.72□□□□□ -1.01
GINS3-205ENST00000564814 MPHOSPH10O00566 681 aaKnown RBP8.72□□□□□ -1.01
GINS3-205ENST00000564814 WDR46O15213 610 aaKnown RBP8.72□□□□□ -1.01
GINS3-205ENST00000564814 ZBTB48P10074 688 aaPredicted RBP8.72□□□□□ -1.01
GINS3-205ENST00000564814 FDX1P10109 184 aa8.72□□□□□ -1.01
GINS3-205ENST00000564814 CDC27P30260 824 aa8.72□□□□□ -1.01
GINS3-205ENST00000564814 KLRC3Q07444 240 aa8.72□□□□□ -1.01
GINS3-205ENST00000564814 RAB3GAP1Q15042 981 aa8.72□□□□□ -1.01
GINS3-205ENST00000564814 RTN1Q16799 776 aa8.72□□□□□ -1.01
GINS3-205ENST00000564814 SHROOM1Q2M3G4 852 aaPredicted RBP8.72□□□□□ -1.01
GINS3-205ENST00000564814 CST9Q5W186 159 aa8.72□□□□□ -1.01
GINS3-205ENST00000564814 NFXL1Q6ZNB6 911 aa8.72□□□□□ -1.01
GINS3-205ENST00000564814 NBPF11Q86T75 865 aa8.72□□□□□ -1.01
GINS3-205ENST00000564814 MICU3Q86XE3 530 aa8.72□□□□□ -1.01
GINS3-205ENST00000564814 STK11IPQ8N1F8 1099 aa8.72□□□□□ -1.01
GINS3-205ENST00000564814 ZNF713Q8N859 430 aaPredicted RBP8.72□□□□□ -1.01
GINS3-205ENST00000564814 C2orf69Q8N8R5 385 aa8.72□□□□□ -1.01
GINS3-205ENST00000564814 PROCA1Q8NCQ7 364 aaPredicted RBP8.72□□□□□ -1.01
GINS3-205ENST00000564814 NSUN7Q8NE18 718 aaKnown RBP8.72□□□□□ -1.01
GINS3-205ENST00000564814 MAF1Q9H063 256 aa8.72□□□□□ -1.01
GINS3-205ENST00000564814 RIOX1Q9H6W3 641 aa8.72□□□□□ -1.01
GINS3-205ENST00000564814 WDR33Q9C0J8 1336 aaKnown RBP8.72□□□□□ -1.01
GINS3-205ENST00000564814 A0A0G2JLL6 359 aaPredicted RBP8.71□□□□□ -1.02
GINS3-205ENST00000564814 PRPF3O43395 683 aaKnown RBP8.71□□□□□ -1.02
GINS3-205ENST00000564814 CTDNEP1O95476 244 aa8.71□□□□□ -1.02
GINS3-205ENST00000564814 NDUFB10O96000 172 aa8.71□□□□□ -1.02
GINS3-205ENST00000564814 PARP1P09874 1014 aaKnown RBP8.71□□□□□ -1.02
GINS3-205ENST00000564814 HOXA7P31268 230 aaPredicted RBP8.71□□□□□ -1.02
GINS3-205ENST00000564814 CTCFP49711 727 aaPredicted RBP8.71□□□□□ -1.02
GINS3-205ENST00000564814 LBX1P52954 281 aa8.71□□□□□ -1.02
GINS3-205ENST00000564814 CYP4F22Q6NT55 531 aa8.71□□□□□ -1.02
GINS3-205ENST00000564814 USP17L2Q6R6M4 530 aa8.71□□□□□ -1.02
GINS3-205ENST00000564814 LBX2Q6XYB7 198 aa8.71□□□□□ -1.02
GINS3-205ENST00000564814 PRRT2Q7Z6L0 340 aaPredicted RBP8.71□□□□□ -1.02
GINS3-205ENST00000564814 FAM160B2Q86V87 743 aa8.71□□□□□ -1.02
GINS3-205ENST00000564814 ACER1Q8TDN7 264 aa8.71□□□□□ -1.02
GINS3-205ENST00000564814 ZKSCAN4Q969J2 545 aaPredicted RBP8.71□□□□□ -1.02
GINS3-205ENST00000564814 ZCCHC17Q9NP64 241 aaKnown RBP8.71□□□□□ -1.02
GINS3-205ENST00000564814 WBP1LQ9NX94 342 aa8.71□□□□□ -1.02
GINS3-205ENST00000564814 CIZ1Q9ULV3 898 aaPredicted RBP8.71□□□□□ -1.02
GINS3-205ENST00000564814 SLC45A1Q9Y2W3 748 aa8.71□□□□□ -1.02
GINS3-205ENST00000564814 KIF3AQ9Y496 699 aa8.71□□□□□ -1.02
GINS3-205ENST00000564814 CNTNAP5Q8WYK1 1306 aa8.71□□□□□ -1.02
GINS3-205ENST00000564814 TESPA1A2RU30 521 aaPredicted RBP8.7□□□□□ -1.02
GINS3-205ENST00000564814 IRF6O14896 467 aa8.7□□□□□ -1.02
GINS3-205ENST00000564814 CELF2O95319 508 aaKnown RBP8.7□□□□□ -1.02
GINS3-205ENST00000564814 FMNL1O95466 1100 aaPredicted RBP8.7□□□□□ -1.02
GINS3-205ENST00000564814 BMP3P12645 472 aa8.7□□□□□ -1.02
GINS3-205ENST00000564814 ADD1P35611 737 aaKnown RBP8.7□□□□□ -1.02
GINS3-205ENST00000564814 ECE1P42892 770 aa8.7□□□□□ -1.02
GINS3-205ENST00000564814 SLC1A4P43007 532 aa8.7□□□□□ -1.02
GINS3-205ENST00000564814 SLFN13Q68D06 897 aa8.7□□□□□ -1.02
GINS3-205ENST00000564814 SAPCD2Q86UD0 394 aa8.7□□□□□ -1.02
GINS3-205ENST00000564814 CLEC10AQ8IUN9 316 aa8.7□□□□□ -1.02
GINS3-205ENST00000564814 CCDC83Q8IWF9 413 aa8.7□□□□□ -1.02
GINS3-205ENST00000564814 LRRC47Q8N1G4 583 aaKnown RBP8.7□□□□□ -1.02
GINS3-205ENST00000564814 CAPNS2Q96L46 248 aa8.7□□□□□ -1.02
GINS3-205ENST00000564814 ZNF408Q9H9D4 720 aa8.7□□□□□ -1.02
GINS3-205ENST00000564814 EMILIN3Q9NT22 766 aa8.7□□□□□ -1.02
GINS3-205ENST00000564814 PNMA2Q9UL42 364 aa8.7□□□□□ -1.02
GINS3-205ENST00000564814 ADAMTS5Q9UNA0 930 aa8.7□□□□□ -1.02
GINS3-205ENST00000564814 TLL2Q9Y6L7 1015 aa8.7□□□□□ -1.02
GINS3-205ENST00000564814 ZHX2Q9Y6X8 837 aa8.7□□□□□ -1.02
GINS3-205ENST00000564814 THSD7BQ9C0I4 1608 aa8.69□□□□□ -1.02
GINS3-205ENST00000564814 PTPDC1A2A3K4 754 aa8.69□□□□□ -1.02
GINS3-205ENST00000564814 KLRF2D3W0D1 207 aa8.69□□□□□ -1.02
GINS3-205ENST00000564814 DLL1O00548 723 aa8.69□□□□□ -1.02
GINS3-205ENST00000564814 CPLX1O14810 134 aa8.69□□□□□ -1.02
GINS3-205ENST00000564814 ATP2A1O14983 1001 aa8.69□□□□□ -1.02
GINS3-205ENST00000564814 CYTH3O43739 400 aa8.69□□□□□ -1.02
GINS3-205ENST00000564814 AOC2O75106 756 aa8.69□□□□□ -1.02
GINS3-205ENST00000564814 DEXIO95424 95 aa8.69□□□□□ -1.02
GINS3-205ENST00000564814 HSPA8P11142 646 aaKnown RBP8.69□□□□□ -1.02
GINS3-205ENST00000564814 FDPSP14324 419 aaKnown RBP8.69□□□□□ -1.02
GINS3-205ENST00000564814 VCAM1P19320 739 aa8.69□□□□□ -1.02
GINS3-205ENST00000564814 PDCP20941 246 aa8.69□□□□□ -1.02
GINS3-205ENST00000564814 STAT2P52630 851 aa8.69□□□□□ -1.02
GINS3-205ENST00000564814 TRAF1Q13077 416 aa8.69□□□□□ -1.02
GINS3-205ENST00000564814 SPP2Q13103 211 aa8.69□□□□□ -1.02
GINS3-205ENST00000564814 MOGSQ13724 837 aa8.69□□□□□ -1.02
GINS3-205ENST00000564814 SLC35G1Q2M3R5 365 aa8.69□□□□□ -1.02
GINS3-205ENST00000564814 DLK2Q6UY11 383 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms