RNA–Protein interactions for RNA: ENST00000560944.1

CERS3-208, Transcript of ceramide synthase 3, human

TSL 3

Gene CERS3, Length 448 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CERS3-208	ENST00000560944	ERICH2	A1L162	156 aa		13.19	□□□□□ -0.3
CERS3-208	ENST00000560944	CCDC69	A6NI79	296 aa		13.19	□□□□□ -0.3
CERS3-208	ENST00000560944	UNCX	A6NJT0	531 aa		13.19	□□□□□ -0.3
CERS3-208	ENST00000560944	EIF5B	O60841	1220 aa	Known RBP	13.19	□□□□□ -0.3
CERS3-208	ENST00000560944	ECM2	O94769	699 aa	Predicted RBP	13.19	□□□□□ -0.3
CERS3-208	ENST00000560944	HMGB1	P09429	215 aa	Known RBP	13.19	□□□□□ -0.3
CERS3-208	ENST00000560944	CYP2C8	P10632	490 aa		13.19	□□□□□ -0.3
CERS3-208	ENST00000560944	GTF2A2	P52657	109 aa		13.19	□□□□□ -0.3
CERS3-208	ENST00000560944	TROAP	Q12815	778 aa		13.19	□□□□□ -0.3
CERS3-208	ENST00000560944	SART3	Q15020	963 aa	Known RBP	13.19	□□□□□ -0.3
CERS3-208	ENST00000560944	RABEP1	Q15276	862 aa		13.19	□□□□□ -0.3
CERS3-208	ENST00000560944	SGMS1	Q86VZ5	419 aa		13.19	□□□□□ -0.3
CERS3-208	ENST00000560944	PIBF1	Q8WXW3	757 aa		13.19	□□□□□ -0.3
CERS3-208	ENST00000560944	CCDC102A	Q96A19	550 aa		13.19	□□□□□ -0.3
CERS3-208	ENST00000560944	C12orf42	Q96LP6	360 aa		13.19	□□□□□ -0.3
CERS3-208	ENST00000560944	AGXT2	Q9BYV1	514 aa		13.19	□□□□□ -0.3
CERS3-208	ENST00000560944	TANGO6	Q9C0B7	1094 aa		13.19	□□□□□ -0.3
CERS3-208	ENST00000560944	GOPC	Q9HD26	462 aa		13.19	□□□□□ -0.3
CERS3-208	ENST00000560944	TMOD4	Q9NZQ9	345 aa		13.19	□□□□□ -0.3
CERS3-208	ENST00000560944		A0A0G2JMZ2	1700 aa		13.19	□□□□□ -0.3
CERS3-208	ENST00000560944	COL11A1	P12107	1806 aa	Predicted RBP	13.18	□□□□□ -0.3
CERS3-208	ENST00000560944	hCG_1642624	A0A1W2PR95	340 aa		13.18	□□□□□ -0.3
CERS3-208	ENST00000560944	GOLGA8A	A7E2F4	631 aa		13.18	□□□□□ -0.3
CERS3-208	ENST00000560944	SNHG28	P0DPA3	235 aa		13.18	□□□□□ -0.3
CERS3-208	ENST00000560944	CETP	P11597	493 aa		13.18	□□□□□ -0.3
CERS3-208	ENST00000560944	CDC27	P30260	824 aa		13.18	□□□□□ -0.3
CERS3-208	ENST00000560944	LIFR	P42702	1097 aa		13.18	□□□□□ -0.3
CERS3-208	ENST00000560944	CCT2	P78371	535 aa	Known RBP	13.18	□□□□□ -0.3
CERS3-208	ENST00000560944	ZNF543	Q08ER8	600 aa		13.18	□□□□□ -0.3
CERS3-208	ENST00000560944	GRM4	Q14833	912 aa		13.18	□□□□□ -0.3
CERS3-208	ENST00000560944	DNAJC5G	Q8N7S2	189 aa		13.18	□□□□□ -0.3
CERS3-208	ENST00000560944	ATG4C	Q96DT6	458 aa		13.18	□□□□□ -0.3
CERS3-208	ENST00000560944	UBA5	Q9GZZ9	404 aa		13.18	□□□□□ -0.3
CERS3-208	ENST00000560944	SH2D4A	Q9H788	454 aa		13.18	□□□□□ -0.3
CERS3-208	ENST00000560944	FAM217B	Q9NTX9	383 aa	Predicted RBP	13.18	□□□□□ -0.3
CERS3-208	ENST00000560944	MAD2L2	Q9UI95	211 aa		13.18	□□□□□ -0.3
CERS3-208	ENST00000560944	TSKS	Q9UJT2	592 aa		13.18	□□□□□ -0.3
CERS3-208	ENST00000560944	AGTPBP1	Q9UPW5	1226 aa		13.18	□□□□□ -0.3
CERS3-208	ENST00000560944	TESPA1	A2RU30	521 aa	Predicted RBP	13.17	□□□□□ -0.3
CERS3-208	ENST00000560944	TMEM232	C9JQI7	657 aa		13.17	□□□□□ -0.3
CERS3-208	ENST00000560944	PDHX	O00330	501 aa		13.17	□□□□□ -0.3
CERS3-208	ENST00000560944	BMP3	P12645	472 aa		13.17	□□□□□ -0.3
CERS3-208	ENST00000560944	PDIA3	P30101	505 aa	Known RBP	13.17	□□□□□ -0.3
CERS3-208	ENST00000560944	SLC1A4	P43007	532 aa		13.17	□□□□□ -0.3
CERS3-208	ENST00000560944	USP14	P54578	494 aa		13.17	□□□□□ -0.3
CERS3-208	ENST00000560944	NOG	Q13253	232 aa		13.17	□□□□□ -0.3
CERS3-208	ENST00000560944	ME3	Q16798	604 aa		13.17	□□□□□ -0.3
CERS3-208	ENST00000560944	CATIP	Q7Z7H3	387 aa		13.17	□□□□□ -0.3
CERS3-208	ENST00000560944	IFNL1	Q8IU54	200 aa		13.17	□□□□□ -0.3
CERS3-208	ENST00000560944	DCAF4	Q8WV16	495 aa		13.17	□□□□□ -0.3
CERS3-208	ENST00000560944	GMCL1	Q96IK5	515 aa		13.17	□□□□□ -0.3
CERS3-208	ENST00000560944	ASCC2	Q9H1I8	757 aa	Predicted RBP	13.17	□□□□□ -0.3
CERS3-208	ENST00000560944	SLC12A7	Q9Y666	1083 aa		13.17	□□□□□ -0.3
CERS3-208	ENST00000560944	MANSC4	A6NHS7	340 aa	Predicted RBP	13.16	□□□□□ -0.3
CERS3-208	ENST00000560944	SPDYE16	A6NNV3	312 aa	Predicted RBP	13.16	□□□□□ -0.3
CERS3-208	ENST00000560944	C19orf81	C9J6K1	198 aa		13.16	□□□□□ -0.3
CERS3-208	ENST00000560944	WDR46	O15213	610 aa	Known RBP	13.16	□□□□□ -0.3
CERS3-208	ENST00000560944	ZBTB43	O43298	467 aa		13.16	□□□□□ -0.3
CERS3-208	ENST00000560944	FLOT1	O75955	427 aa		13.16	□□□□□ -0.3
CERS3-208	ENST00000560944	DDAH1	O94760	285 aa		13.16	□□□□□ -0.3
CERS3-208	ENST00000560944	CCDC178	Q5BJE1	867 aa		13.16	□□□□□ -0.3
CERS3-208	ENST00000560944	CCDC82	Q8N4S0	544 aa		13.16	□□□□□ -0.3
CERS3-208	ENST00000560944	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.16	□□□□□ -0.3
CERS3-208	ENST00000560944	KIFC2	Q96AC6	838 aa		13.16	□□□□□ -0.3
CERS3-208	ENST00000560944	P2RX7	Q99572	595 aa	Known RBP	13.16	□□□□□ -0.3
CERS3-208	ENST00000560944	TBC1D2	Q9BYX2	928 aa		13.16	□□□□□ -0.3
CERS3-208	ENST00000560944	SMCHD1	A6NHR9	2005 aa		13.16	□□□□□ -0.3
CERS3-208	ENST00000560944	ADGRA2	Q96PE1	1338 aa		13.15	□□□□□ -0.3
CERS3-208	ENST00000560944	PALM3	A6NDB9	673 aa	Predicted RBP	13.15	□□□□□ -0.3
CERS3-208	ENST00000560944	CYTH3	O43739	400 aa		13.15	□□□□□ -0.3
CERS3-208	ENST00000560944	CNMD	O75829	334 aa		13.15	□□□□□ -0.3
CERS3-208	ENST00000560944	PARP1	P09874	1014 aa	Known RBP	13.15	□□□□□ -0.3
CERS3-208	ENST00000560944	ADD1	P35611	737 aa	Known RBP	13.15	□□□□□ -0.3
CERS3-208	ENST00000560944	SCRN1	Q12765	414 aa		13.15	□□□□□ -0.3
CERS3-208	ENST00000560944	IK	Q13123	557 aa	Predicted RBP	13.15	□□□□□ -0.3
CERS3-208	ENST00000560944	RTN1	Q16799	776 aa		13.15	□□□□□ -0.3
CERS3-208	ENST00000560944	CATSPERG	Q6ZRH7	1159 aa		13.15	□□□□□ -0.3
CERS3-208	ENST00000560944	FASTKD5	Q7L8L6	764 aa	Known RBP	13.15	□□□□□ -0.3
CERS3-208	ENST00000560944	ANKRD23	Q86SG2	305 aa		13.15	□□□□□ -0.3
CERS3-208	ENST00000560944	SRBD1	Q8N5C6	995 aa	Known RBP	13.15	□□□□□ -0.3
CERS3-208	ENST00000560944	LPAR1	Q92633	364 aa		13.15	□□□□□ -0.3
CERS3-208	ENST00000560944	TXNRD2	Q9NNW7	524 aa		13.15	□□□□□ -0.3
CERS3-208	ENST00000560944	TSHZ2	Q9NRE2	1034 aa		13.15	□□□□□ -0.3
CERS3-208	ENST00000560944	CNTNAP5	Q8WYK1	1306 aa		13.14	□□□□□ -0.31
CERS3-208	ENST00000560944	USP17L15	C9J2P7	530 aa		13.14	□□□□□ -0.31
CERS3-208	ENST00000560944	USP17L13	C9JLJ4	530 aa		13.14	□□□□□ -0.31
CERS3-208	ENST00000560944	USP17L11	C9JVI0	530 aa		13.14	□□□□□ -0.31
CERS3-208	ENST00000560944	USP17L18	D6R9N7	530 aa		13.14	□□□□□ -0.31
CERS3-208	ENST00000560944	USP17L22	D6RA61	530 aa		13.14	□□□□□ -0.31
CERS3-208	ENST00000560944	USP17L17	D6RBQ6	530 aa		13.14	□□□□□ -0.31
CERS3-208	ENST00000560944	USP17L19	D6RCP7	530 aa		13.14	□□□□□ -0.31
CERS3-208	ENST00000560944	USP17L20	D6RJB6	530 aa		13.14	□□□□□ -0.31
CERS3-208	ENST00000560944	NT5C2	P49902	561 aa		13.14	□□□□□ -0.31
CERS3-208	ENST00000560944	METAP2	P50579	478 aa	Known RBP eCLIP	13.14	□□□□□ -0.31
CERS3-208	ENST00000560944	HERVK_113	P62684	666 aa		13.14	□□□□□ -0.31
CERS3-208	ENST00000560944	IRX3	P78415	501 aa	Predicted RBP	13.14	□□□□□ -0.31
CERS3-208	ENST00000560944	CAP1	Q01518	475 aa		13.14	□□□□□ -0.31
CERS3-208	ENST00000560944	USP17L24	Q0WX57	530 aa		13.14	□□□□□ -0.31
CERS3-208	ENST00000560944	FUT2	Q10981	343 aa		13.14	□□□□□ -0.31
CERS3-208	ENST00000560944	CRHR2	Q13324	411 aa		13.14	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms