RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 LUC7L2Q9Y383 392 aaKnown RBP13.36□□□□□ -0.27
XRCC3-208ENST00000554811 ADGRG1Q9Y653 693 aa13.36□□□□□ -0.27
XRCC3-208ENST00000554811 B4DLN1 442 aa13.36□□□□□ -0.27
XRCC3-208ENST00000554811 SCG2P13521 617 aa13.36□□□□□ -0.27
XRCC3-208ENST00000554811 H2AFXP16104 143 aaPredicted RBP13.36□□□□□ -0.27
XRCC3-208ENST00000554811 MECOMQ03112 1051 aa13.36□□□□□ -0.27
XRCC3-208ENST00000554811 CCDC96Q2M329 555 aa13.36□□□□□ -0.27
XRCC3-208ENST00000554811 LEKR1Q6ZMV7 388 aa13.36□□□□□ -0.27
XRCC3-208ENST00000554811 MED15Q96RN5 788 aa13.36□□□□□ -0.27
XRCC3-208ENST00000554811 CTAGE1Q96RT6 745 aa13.36□□□□□ -0.27
XRCC3-208ENST00000554811 COPB1P53618 953 aaKnown RBP13.35□□□□□ -0.27
XRCC3-208ENST00000554811 KCTD19Q17RG1 926 aaPredicted RBP13.35□□□□□ -0.27
XRCC3-208ENST00000554811 GPR161Q8N6U8 529 aaKnown RBP13.35□□□□□ -0.27
XRCC3-208ENST00000554811 NAPGQ99747 312 aaPredicted RBP13.35□□□□□ -0.27
XRCC3-208ENST00000554811 FAM207AQ9NSI2 230 aaPredicted RBP13.35□□□□□ -0.27
XRCC3-208ENST00000554811 TBC1D7Q9P0N9 293 aa13.35□□□□□ -0.27
XRCC3-208ENST00000554811 CAMTA1Q9Y6Y1 1673 aa13.35□□□□□ -0.27
XRCC3-208ENST00000554811 CCNT1O60563 726 aaKnown RBP13.35□□□□□ -0.27
XRCC3-208ENST00000554811 N4BP1O75113 896 aaKnown RBP13.35□□□□□ -0.27
XRCC3-208ENST00000554811 MFAP3LO75121 409 aa13.35□□□□□ -0.27
XRCC3-208ENST00000554811 TXKP42681 527 aa13.35□□□□□ -0.27
XRCC3-208ENST00000554811 SOGA3Q5TF21 947 aa13.35□□□□□ -0.27
XRCC3-208ENST00000554811 CCDC47Q96A33 483 aaKnown RBP13.35□□□□□ -0.27
XRCC3-208ENST00000554811 PLA2G12BQ9BX93 195 aa13.35□□□□□ -0.27
XRCC3-208ENST00000554811 UBA5Q9GZZ9 404 aa13.35□□□□□ -0.27
XRCC3-208ENST00000554811 CDHR2Q9BYE9 1310 aa13.35□□□□□ -0.27
XRCC3-208ENST00000554811 RPN1P04843 607 aaKnown RBP13.35□□□□□ -0.27
XRCC3-208ENST00000554811 HIBADHP31937 336 aaKnown RBP13.35□□□□□ -0.27
XRCC3-208ENST00000554811 TDRD12Q587J7 1177 aaKnown RBP13.35□□□□□ -0.27
XRCC3-208ENST00000554811 CSGALNACT2Q8N6G5 542 aa13.35□□□□□ -0.27
XRCC3-208ENST00000554811 PNMA1Q8ND90 353 aa13.35□□□□□ -0.27
XRCC3-208ENST00000554811 CALCOCO1Q9P1Z2 691 aa13.35□□□□□ -0.27
XRCC3-208ENST00000554811 MRFAP1Q9Y605 127 aa13.35□□□□□ -0.27
XRCC3-208ENST00000554811 PRCPP42785 496 aa13.34□□□□□ -0.27
XRCC3-208ENST00000554811 PDE4DQ08499 809 aa13.34□□□□□ -0.27
XRCC3-208ENST00000554811 TBC1D8BQ0IIM8 1120 aa13.34□□□□□ -0.27
XRCC3-208ENST00000554811 CTR9Q6PD62 1173 aa13.34□□□□□ -0.27
XRCC3-208ENST00000554811 ABCB6Q9NP58 842 aa13.34□□□□□ -0.27
XRCC3-208ENST00000554811 SLIT3O75094 1523 aa13.34□□□□□ -0.27
XRCC3-208ENST00000554811 MYO1BO43795 1136 aa13.34□□□□□ -0.27
XRCC3-208ENST00000554811 GYPCP04921 128 aa13.34□□□□□ -0.27
XRCC3-208ENST00000554811 KIF5BP33176 963 aa13.34□□□□□ -0.27
XRCC3-208ENST00000554811 TECP42680 631 aa13.34□□□□□ -0.27
XRCC3-208ENST00000554811 KLK7P49862 253 aa13.34□□□□□ -0.27
XRCC3-208ENST00000554811 NR1I3Q14994 352 aa13.34□□□□□ -0.27
XRCC3-208ENST00000554811 CCDC148Q8NFR7 591 aa13.34□□□□□ -0.27
XRCC3-208ENST00000554811 NLRP3Q96P20 1036 aa13.34□□□□□ -0.27
XRCC3-208ENST00000554811 CENPHQ9H3R5 247 aa13.34□□□□□ -0.27
XRCC3-208ENST00000554811 POLD4Q9HCU8 107 aa13.34□□□□□ -0.27
XRCC3-208ENST00000554811 CXCR5P32302 372 aa13.34□□□□□ -0.27
XRCC3-208ENST00000554811 ITPK1Q13572 414 aa13.34□□□□□ -0.27
XRCC3-208ENST00000554811 FAM98CQ17RN3 349 aaKnown RBP13.34□□□□□ -0.27
XRCC3-208ENST00000554811 TCP11L1Q9NUJ3 509 aa13.34□□□□□ -0.27
XRCC3-208ENST00000554811 EXOC1Q9NV70 894 aa13.34□□□□□ -0.27
XRCC3-208ENST00000554811 RSPH14Q9UHP6 348 aa13.34□□□□□ -0.27
XRCC3-208ENST00000554811 CHD2O14647 1828 aaKnown RBP13.33□□□□□ -0.27
XRCC3-208ENST00000554811 RNF225M0QZC1 329 aaPredicted RBP13.33□□□□□ -0.28
XRCC3-208ENST00000554811 PSMA7O14818 248 aa13.33□□□□□ -0.28
XRCC3-208ENST00000554811 MDM2Q00987 491 aaPredicted RBP13.33□□□□□ -0.28
XRCC3-208ENST00000554811 TRMT1LQ7Z2T5 733 aaKnown RBP13.33□□□□□ -0.28
XRCC3-208ENST00000554811 NOC3LQ8WTT2 800 aaKnown RBP13.33□□□□□ -0.28
XRCC3-208ENST00000554811 FERMT2Q96AC1 680 aa13.33□□□□□ -0.28
XRCC3-208ENST00000554811 SLC39A2Q9NP94 309 aa13.33□□□□□ -0.28
XRCC3-208ENST00000554811 BIN2Q9UBW5 565 aaPredicted RBP13.33□□□□□ -0.28
XRCC3-208ENST00000554811 FAN1Q9Y2M0 1017 aa13.33□□□□□ -0.28
XRCC3-208ENST00000554811 LAMA4Q16363 1823 aa13.33□□□□□ -0.28
XRCC3-208ENST00000554811 GNPATO15228 680 aa13.33□□□□□ -0.28
XRCC3-208ENST00000554811 FGFR2P21802 821 aa13.33□□□□□ -0.28
XRCC3-208ENST00000554811 PKN1Q16512 942 aa13.33□□□□□ -0.28
XRCC3-208ENST00000554811 CCDC93Q567U6 631 aa13.33□□□□□ -0.28
XRCC3-208ENST00000554811 SRGAP1Q7Z6B7 1085 aa13.33□□□□□ -0.28
XRCC3-208ENST00000554811 BLIDQ8IZY5 108 aa13.33□□□□□ -0.28
XRCC3-208ENST00000554811 NOA1Q8NC60 698 aaKnown RBP13.33□□□□□ -0.28
XRCC3-208ENST00000554811 SETDB2Q96T68 719 aa13.33□□□□□ -0.28
XRCC3-208ENST00000554811 ARFGEF2Q9Y6D5 1785 aa13.33□□□□□ -0.28
XRCC3-208ENST00000554811 WDR19Q8NEZ3 1342 aa13.33□□□□□ -0.28
XRCC3-208ENST00000554811 MPHOSPH10O00566 681 aaKnown RBP13.33□□□□□ -0.28
XRCC3-208ENST00000554811 EIF3JO75822 258 aaKnown RBP13.33□□□□□ -0.28
XRCC3-208ENST00000554811 TBC1D8O95759 1140 aa13.33□□□□□ -0.28
XRCC3-208ENST00000554811 PARP1P09874 1014 aaKnown RBP13.33□□□□□ -0.28
XRCC3-208ENST00000554811 ERCC5P28715 1186 aaPredicted RBP13.33□□□□□ -0.28
XRCC3-208ENST00000554811 NKX1-1Q15270 411 aaPredicted RBP13.33□□□□□ -0.28
XRCC3-208ENST00000554811 TMTC3Q6ZXV5 915 aa13.33□□□□□ -0.28
XRCC3-208ENST00000554811 TMEM139Q8IV31 216 aa13.33□□□□□ -0.28
XRCC3-208ENST00000554811 ZNF34Q8IZ26 560 aa13.33□□□□□ -0.28
XRCC3-208ENST00000554811 KANSL2Q9H9L4 492 aa13.33□□□□□ -0.28
XRCC3-208ENST00000554811 CDC23Q9UJX2 597 aa13.33□□□□□ -0.28
XRCC3-208ENST00000554811 FRMPD2Q68DX3 1309 aaPredicted RBP13.32□□□□□ -0.28
XRCC3-208ENST00000554811 MAP3K9P80192 1104 aa13.32□□□□□ -0.28
XRCC3-208ENST00000554811 ALX1Q15699 326 aa13.32□□□□□ -0.28
XRCC3-208ENST00000554811 CCDC181Q5TID7 509 aa13.32□□□□□ -0.28
XRCC3-208ENST00000554811 TTC19Q6DKK2 380 aaPredicted RBP13.32□□□□□ -0.28
XRCC3-208ENST00000554811 CYP26C1Q6V0L0 522 aa13.32□□□□□ -0.28
XRCC3-208ENST00000554811 CEP112Q8N8E3 955 aa13.32□□□□□ -0.28
XRCC3-208ENST00000554811 SMCR8Q8TEV9 937 aaPredicted RBP13.32□□□□□ -0.28
XRCC3-208ENST00000554811 PNKPQ96T60 521 aa13.32□□□□□ -0.28
XRCC3-208ENST00000554811 ADD3Q9UEY8 706 aaKnown RBP13.32□□□□□ -0.28
XRCC3-208ENST00000554811 CRYBG1Q9Y4K1 1723 aa13.32□□□□□ -0.28
XRCC3-208ENST00000554811 XDHP47989 1333 aa13.32□□□□□ -0.28
XRCC3-208ENST00000554811 STK36Q9NRP7 1315 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms