RNA–Protein interactions for RNA: ENST00000539977.1

PABPC1P4-201, Transcript of poly(A) binding protein cytoplasmic 1 pseudogene 4, humanhuman

BASIC

Gene PABPC1P4, Length 1,875 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P4-201ENST00000539977 GNAQP50148 359 aa11.96□□□□□ -0.49
PABPC1P4-201ENST00000539977 MAP3K10Q02779 954 aa11.96□□□□□ -0.49
PABPC1P4-201ENST00000539977 KLRC3Q07444 240 aa11.96□□□□□ -0.49
PABPC1P4-201ENST00000539977 ZNF543Q08ER8 600 aa11.96□□□□□ -0.49
PABPC1P4-201ENST00000539977 NR5A1Q13285 461 aa11.96□□□□□ -0.49
PABPC1P4-201ENST00000539977 KIAA1755Q5JYT7 1200 aa11.96□□□□□ -0.49
PABPC1P4-201ENST00000539977 SLFN13Q68D06 897 aa11.96□□□□□ -0.49
PABPC1P4-201ENST00000539977 APOBEC3FQ8IUX4 373 aaKnown RBP11.96□□□□□ -0.49
PABPC1P4-201ENST00000539977 MKL1Q969V6 931 aa11.96□□□□□ -0.49
PABPC1P4-201ENST00000539977 GZF1Q9H116 711 aaPredicted RBP11.96□□□□□ -0.49
PABPC1P4-201ENST00000539977 ZSCAN16Q9H4T2 348 aaPredicted RBP11.96□□□□□ -0.49
PABPC1P4-201ENST00000539977 SBF1O95248 1867 aa11.96□□□□□ -0.5
PABPC1P4-201ENST00000539977 MMP1P03956 469 aa11.95□□□□□ -0.5
PABPC1P4-201ENST00000539977 SLC1A4P43007 532 aa11.95□□□□□ -0.5
PABPC1P4-201ENST00000539977 PFKFB3Q16875 520 aaPredicted RBP11.95□□□□□ -0.5
PABPC1P4-201ENST00000539977 HEATR3Q7Z4Q2 680 aa11.95□□□□□ -0.5
PABPC1P4-201ENST00000539977 DIS3L2Q8IYB7 885 aaKnown RBP11.95□□□□□ -0.5
PABPC1P4-201ENST00000539977 ZKSCAN4Q969J2 545 aaPredicted RBP11.95□□□□□ -0.5
PABPC1P4-201ENST00000539977 PIGSQ96S52 555 aa11.95□□□□□ -0.5
PABPC1P4-201ENST00000539977 GLTPD2A6NH11 291 aa11.95□□□□□ -0.5
PABPC1P4-201ENST00000539977 NDUFB10O96000 172 aa11.95□□□□□ -0.5
PABPC1P4-201ENST00000539977 KRT85P78386 507 aa11.95□□□□□ -0.5
PABPC1P4-201ENST00000539977 EAPPQ56P03 285 aaPredicted RBP11.95□□□□□ -0.5
PABPC1P4-201ENST00000539977 TYW1BQ6NUM6 668 aa11.95□□□□□ -0.5
PABPC1P4-201ENST00000539977 EPHX2P34913 555 aa11.94□□□□□ -0.5
PABPC1P4-201ENST00000539977 SNAP25P60880 206 aa11.94□□□□□ -0.5
PABPC1P4-201ENST00000539977 DGKZQ13574 1117 aa11.94□□□□□ -0.5
PABPC1P4-201ENST00000539977 ASPRV1Q53RT3 343 aa11.94□□□□□ -0.5
PABPC1P4-201ENST00000539977 NOM1Q5C9Z4 860 aaKnown RBP11.94□□□□□ -0.5
PABPC1P4-201ENST00000539977 WWC2Q6AWC2 1192 aa11.94□□□□□ -0.5
PABPC1P4-201ENST00000539977 ADGRF4Q8IZF3 695 aa11.94□□□□□ -0.5
PABPC1P4-201ENST00000539977 DCPSQ96C86 337 aaKnown RBP11.94□□□□□ -0.5
PABPC1P4-201ENST00000539977 USP28Q96RU2 1077 aa11.94□□□□□ -0.5
PABPC1P4-201ENST00000539977 WRNIP1Q96S55 665 aa11.94□□□□□ -0.5
PABPC1P4-201ENST00000539977 LZTS2Q9BRK4 669 aa11.94□□□□□ -0.5
PABPC1P4-201ENST00000539977 SPZ1Q9BXG8 430 aa11.94□□□□□ -0.5
PABPC1P4-201ENST00000539977 DDX49Q9Y6V7 483 aaKnown RBP11.94□□□□□ -0.5
PABPC1P4-201ENST00000539977 FAM205CA6NFA0 338 aa11.93□□□□□ -0.5
PABPC1P4-201ENST00000539977 USP17L10C9JJH3 530 aa11.93□□□□□ -0.5
PABPC1P4-201ENST00000539977 XBP1P17861 261 aa11.93□□□□□ -0.5
PABPC1P4-201ENST00000539977 NLRP5P59047 1200 aa11.93□□□□□ -0.5
PABPC1P4-201ENST00000539977 IKQ13123 557 aaPredicted RBP11.93□□□□□ -0.5
PABPC1P4-201ENST00000539977 SAFBQ15424 915 aaKnown RBP eCLIP11.93□□□□□ -0.5
PABPC1P4-201ENST00000539977 PPP4R3BQ5MIZ7 849 aa11.93□□□□□ -0.5
PABPC1P4-201ENST00000539977 SAMD1Q6SPF0 538 aaPredicted RBP11.93□□□□□ -0.5
PABPC1P4-201ENST00000539977 KRT26Q7Z3Y9 468 aa11.93□□□□□ -0.5
PABPC1P4-201ENST00000539977 GPT2Q8TD30 523 aa11.93□□□□□ -0.5
PABPC1P4-201ENST00000539977 RRP36Q96EU6 259 aaKnown RBP11.93□□□□□ -0.5
PABPC1P4-201ENST00000539977 L3MBTL3Q96JM7 780 aaPredicted RBP11.93□□□□□ -0.5
PABPC1P4-201ENST00000539977 SPATA32Q96LK8 384 aa11.93□□□□□ -0.5
PABPC1P4-201ENST00000539977 PHF20Q9BVI0 1012 aa11.93□□□□□ -0.5
PABPC1P4-201ENST00000539977 JMJD4Q9H9V9 463 aa11.93□□□□□ -0.5
PABPC1P4-201ENST00000539977 ARHGEF10LQ9HCE6 1279 aa11.93□□□□□ -0.5
PABPC1P4-201ENST00000539977 POTECB2RU33 542 aa11.93□□□□□ -0.5
PABPC1P4-201ENST00000539977 ASNSP08243 561 aa11.93□□□□□ -0.5
PABPC1P4-201ENST00000539977 ATP2B1P20020 1258 aa11.93□□□□□ -0.5
PABPC1P4-201ENST00000539977 U2AF2P26368 475 aaKnown RBP eCLIP11.93□□□□□ -0.5
PABPC1P4-201ENST00000539977 NPY5RQ15761 445 aa11.93□□□□□ -0.5
PABPC1P4-201ENST00000539977 EARS2Q5JPH6 523 aaKnown RBP11.93□□□□□ -0.5
PABPC1P4-201ENST00000539977 MYSM1Q5VVJ2 828 aa11.93□□□□□ -0.5
PABPC1P4-201ENST00000539977 SULF1Q8IWU6 871 aa11.93□□□□□ -0.5
PABPC1P4-201ENST00000539977 LEO1Q8WVC0 666 aaPredicted RBP11.93□□□□□ -0.5
PABPC1P4-201ENST00000539977 ZNF341Q9BYN7 854 aa11.93□□□□□ -0.5
PABPC1P4-201ENST00000539977 RIOX1Q9H6W3 641 aa11.93□□□□□ -0.5
PABPC1P4-201ENST00000539977 TMX2Q9Y320 296 aa11.93□□□□□ -0.5
PABPC1P4-201ENST00000539977 CLIC4Q9Y696 253 aa11.93□□□□□ -0.5
PABPC1P4-201ENST00000539977 TMEM232C9JQI7 657 aa11.92□□□□□ -0.5
PABPC1P4-201ENST00000539977 CTNND1O60716 968 aaKnown RBP11.92□□□□□ -0.5
PABPC1P4-201ENST00000539977 POTEIP0CG38 1075 aa11.92□□□□□ -0.5
PABPC1P4-201ENST00000539977 POTEJP0CG39 1038 aa11.92□□□□□ -0.5
PABPC1P4-201ENST00000539977 GPATCH4Q5T3I0 446 aaKnown RBP11.92□□□□□ -0.5
PABPC1P4-201ENST00000539977 DCAF15Q66K64 600 aa11.92□□□□□ -0.5
PABPC1P4-201ENST00000539977 BRAPQ7Z569 592 aa11.92□□□□□ -0.5
PABPC1P4-201ENST00000539977 NOSTRINQ8IVI9 506 aa11.92□□□□□ -0.5
PABPC1P4-201ENST00000539977 GMCL1P1Q8NEA9 526 aa11.92□□□□□ -0.5
PABPC1P4-201ENST00000539977 RASGRP4Q8TDF6 673 aa11.92□□□□□ -0.5
PABPC1P4-201ENST00000539977 DCAF4Q8WV16 495 aa11.92□□□□□ -0.5
PABPC1P4-201ENST00000539977 COA7Q96BR5 231 aa11.92□□□□□ -0.5
PABPC1P4-201ENST00000539977 SEC63Q9UGP8 760 aaKnown RBP11.92□□□□□ -0.5
PABPC1P4-201ENST00000539977 DICER1Q9UPY3 1922 aaKnown RBP11.92□□□□□ -0.5
PABPC1P4-201ENST00000539977 STXBP3O00186 592 aa11.91□□□□□ -0.5
PABPC1P4-201ENST00000539977 PPP1R11O60927 126 aaPredicted RBP11.91□□□□□ -0.5
PABPC1P4-201ENST00000539977 BMP3P12645 472 aa11.91□□□□□ -0.5
PABPC1P4-201ENST00000539977 TAL1P17542 331 aaPredicted RBP11.91□□□□□ -0.5
PABPC1P4-201ENST00000539977 KRT2P35908 639 aa11.91□□□□□ -0.5
PABPC1P4-201ENST00000539977 FAM83BQ5T0W9 1011 aa11.91□□□□□ -0.5
PABPC1P4-201ENST00000539977 FEZ1Q99689 392 aa11.91□□□□□ -0.5
PABPC1P4-201ENST00000539977 TAF1DQ9H5J8 278 aaPredicted RBP11.91□□□□□ -0.5
PABPC1P4-201ENST00000539977 BARHL2Q9NY43 387 aa11.91□□□□□ -0.5
PABPC1P4-201ENST00000539977 RBM27Q9P2N5 1060 aaKnown RBP11.91□□□□□ -0.5
PABPC1P4-201ENST00000539977 SSC5DA1L4H1 1573 aa11.91□□□□□ -0.5
PABPC1P4-201ENST00000539977 NAPAP54920 295 aa11.91□□□□□ -0.5
PABPC1P4-201ENST00000539977 SUPT20HL1Q3ZLR7 823 aa11.91□□□□□ -0.5
PABPC1P4-201ENST00000539977 USP50Q70EL3 339 aaPredicted RBP11.91□□□□□ -0.5
PABPC1P4-201ENST00000539977 TMEM87AQ8NBN3 555 aa11.91□□□□□ -0.5
PABPC1P4-201ENST00000539977 GMCL1Q96IK5 515 aa11.91□□□□□ -0.5
PABPC1P4-201ENST00000539977 ZNF396Q96N95 335 aaPredicted RBP11.91□□□□□ -0.5
PABPC1P4-201ENST00000539977 SCAND2PQ9GZW5 306 aaPredicted RBP11.91□□□□□ -0.5
PABPC1P4-201ENST00000539977 FOXP1Q9H334 677 aaPredicted RBP11.91□□□□□ -0.5
PABPC1P4-201ENST00000539977 CFAP45Q9UL16 551 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms