RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 ZRANB2O95218 330 aaKnown RBP eCLIP13.56□□□□□ -0.24
CPNE8-203ENST00000538596 KIF20AO95235 890 aa13.56□□□□□ -0.24
CPNE8-203ENST00000538596 CCDC175P0C221 793 aa13.56□□□□□ -0.24
CPNE8-203ENST00000538596 TMCO3Q6UWJ1 677 aa13.56□□□□□ -0.24
CPNE8-203ENST00000538596 DYNLL2Q96FJ2 89 aa13.56□□□□□ -0.24
CPNE8-203ENST00000538596 CCDC34Q96HJ3 373 aa13.56□□□□□ -0.24
CPNE8-203ENST00000538596 NOL10Q9BSC4 688 aaKnown RBP13.56□□□□□ -0.24
CPNE8-203ENST00000538596 GDAQ9Y2T3 454 aa13.56□□□□□ -0.24
CPNE8-203ENST00000538596 SCN7AQ01118 1682 aa13.56□□□□□ -0.24
CPNE8-203ENST00000538596 CASZ1Q86V15 1759 aa13.55□□□□□ -0.24
CPNE8-203ENST00000538596 MYH8P13535 1937 aa13.55□□□□□ -0.24
CPNE8-203ENST00000538596 GOLGA6L9A6NEM1 432 aa13.55□□□□□ -0.24
CPNE8-203ENST00000538596 MFAP3LO75121 409 aa13.55□□□□□ -0.24
CPNE8-203ENST00000538596 HIBADHP31937 336 aaKnown RBP13.55□□□□□ -0.24
CPNE8-203ENST00000538596 RPS8P62241 208 aaKnown RBP13.55□□□□□ -0.24
CPNE8-203ENST00000538596 KRT31Q15323 416 aa13.55□□□□□ -0.24
CPNE8-203ENST00000538596 PFKFB3Q16875 520 aaPredicted RBP13.55□□□□□ -0.24
CPNE8-203ENST00000538596 TYW1BQ6NUM6 668 aa13.55□□□□□ -0.24
CPNE8-203ENST00000538596 CLEC4GQ6UXB4 293 aa13.55□□□□□ -0.24
CPNE8-203ENST00000538596 IQUBQ8NA54 791 aa13.55□□□□□ -0.24
CPNE8-203ENST00000538596 ACRBPQ8NEB7 543 aa13.55□□□□□ -0.24
CPNE8-203ENST00000538596 ZBTB9Q96C00 473 aa13.55□□□□□ -0.24
CPNE8-203ENST00000538596 CRNKL1Q9BZJ0 848 aaKnown RBP13.55□□□□□ -0.24
CPNE8-203ENST00000538596 MCM9Q9NXL9 1143 aa13.55□□□□□ -0.24
CPNE8-203ENST00000538596 PP2D1A8MPX8 630 aa13.55□□□□□ -0.24
CPNE8-203ENST00000538596 ORC4O43929 436 aa13.55□□□□□ -0.24
CPNE8-203ENST00000538596 PLIN2Q99541 437 aa13.55□□□□□ -0.24
CPNE8-203ENST00000538596 TAB2Q9NYJ8 693 aa13.55□□□□□ -0.24
CPNE8-203ENST00000538596 EP400Q96L91 3159 aa13.55□□□□□ -0.24
CPNE8-203ENST00000538596 RREB1Q92766 1687 aa13.55□□□□□ -0.24
CPNE8-203ENST00000538596 SASH3O75995 380 aa13.54□□□□□ -0.24
CPNE8-203ENST00000538596 BMP15O95972 392 aa13.54□□□□□ -0.24
CPNE8-203ENST00000538596 NGLY1Q96IV0 654 aa13.54□□□□□ -0.24
CPNE8-203ENST00000538596 IL17RBQ9NRM6 502 aa13.54□□□□□ -0.24
CPNE8-203ENST00000538596 N4BP3O15049 544 aa13.54□□□□□ -0.24
CPNE8-203ENST00000538596 TFAP4Q01664 338 aa13.54□□□□□ -0.24
CPNE8-203ENST00000538596 FAM98CQ17RN3 349 aaKnown RBP13.54□□□□□ -0.24
CPNE8-203ENST00000538596 RASGRP2Q7LDG7 609 aa13.54□□□□□ -0.24
CPNE8-203ENST00000538596 CDCA7Q9BWT1 371 aaPredicted RBP13.54□□□□□ -0.24
CPNE8-203ENST00000538596 ARGLU1Q9NWB6 273 aaPredicted RBP13.54□□□□□ -0.24
CPNE8-203ENST00000538596 DLEC1Q9Y238 1755 aa13.54□□□□□ -0.24
CPNE8-203ENST00000538596 TRIM49BA6NDI0 452 aa13.54□□□□□ -0.24
CPNE8-203ENST00000538596 FILIP1LQ4L180 1135 aa13.54□□□□□ -0.24
CPNE8-203ENST00000538596 RSRC2Q7L4I2 434 aaKnown RBP13.54□□□□□ -0.24
CPNE8-203ENST00000538596 NELFBQ8WX92 580 aa13.54□□□□□ -0.24
CPNE8-203ENST00000538596 PUF60Q9UHX1 559 aaKnown RBP13.54□□□□□ -0.24
CPNE8-203ENST00000538596 NRAPQ86VF7 1730 aa13.53□□□□□ -0.24
CPNE8-203ENST00000538596 USP17L3A6NCW0 530 aa13.53□□□□□ -0.24
CPNE8-203ENST00000538596 USP17L4A6NCW7 530 aa13.53□□□□□ -0.24
CPNE8-203ENST00000538596 ERVK-24P63145 666 aa13.53□□□□□ -0.24
CPNE8-203ENST00000538596 SLC35G1Q2M3R5 365 aa13.53□□□□□ -0.24
CPNE8-203ENST00000538596 USP17L1Q7RTZ2 530 aa13.53□□□□□ -0.24
CPNE8-203ENST00000538596 C4orf32Q8N8J7 132 aa13.53□□□□□ -0.24
CPNE8-203ENST00000538596 CTAGE1Q96RT6 745 aa13.53□□□□□ -0.24
CPNE8-203ENST00000538596 PARD6BQ9BYG5 372 aa13.53□□□□□ -0.24
CPNE8-203ENST00000538596 PCP11498 1178 aaKnown RBP13.53□□□□□ -0.24
CPNE8-203ENST00000538596 PRCPP42785 496 aa13.53□□□□□ -0.24
CPNE8-203ENST00000538596 ZNF569Q5MCW4 686 aa13.53□□□□□ -0.24
CPNE8-203ENST00000538596 FAM182BQ5T319 152 aa13.53□□□□□ -0.24
CPNE8-203ENST00000538596 SLC44A5Q8NCS7 719 aa13.53□□□□□ -0.24
CPNE8-203ENST00000538596 EEF2KMTQ96G04 330 aa13.53□□□□□ -0.24
CPNE8-203ENST00000538596 CPVLQ9H3G5 476 aa13.53□□□□□ -0.24
CPNE8-203ENST00000538596 ATP8A2Q9NTI2 1148 aa13.53□□□□□ -0.24
CPNE8-203ENST00000538596 ERICH4A6NGS2 130 aa13.52□□□□□ -0.24
CPNE8-203ENST00000538596 POLR3GO15318 223 aaPredicted RBP13.52□□□□□ -0.24
CPNE8-203ENST00000538596 RPN1P04843 607 aaKnown RBP13.52□□□□□ -0.24
CPNE8-203ENST00000538596 PAK1Q13153 545 aa13.52□□□□□ -0.24
CPNE8-203ENST00000538596 GRIK5Q16478 980 aa13.52□□□□□ -0.24
CPNE8-203ENST00000538596 AMIGO3Q86WK7 504 aa13.52□□□□□ -0.24
CPNE8-203ENST00000538596 NBPF5PQ86XG9 351 aaPredicted RBP13.52□□□□□ -0.24
CPNE8-203ENST00000538596 BLIDQ8IZY5 108 aa13.52□□□□□ -0.24
CPNE8-203ENST00000538596 TMEM60Q9H2L4 133 aa13.52□□□□□ -0.24
CPNE8-203ENST00000538596 KAT14Q9H8E8 782 aa13.52□□□□□ -0.24
CPNE8-203ENST00000538596 GTPBP6O43824 516 aaPredicted RBP13.52□□□□□ -0.25
CPNE8-203ENST00000538596 TBC1D8O95759 1140 aa13.52□□□□□ -0.25
CPNE8-203ENST00000538596 COPB1P53618 953 aaKnown RBP13.52□□□□□ -0.25
CPNE8-203ENST00000538596 DIXDC1Q155Q3 683 aa13.52□□□□□ -0.25
CPNE8-203ENST00000538596 CT47A1Q5JQC4 288 aaPredicted RBP13.52□□□□□ -0.25
CPNE8-203ENST00000538596 CC2D1AQ6P1N0 951 aaPredicted RBP13.52□□□□□ -0.25
CPNE8-203ENST00000538596 PNMA1Q8ND90 353 aa13.52□□□□□ -0.25
CPNE8-203ENST00000538596 NLRP3Q96P20 1036 aa13.52□□□□□ -0.25
CPNE8-203ENST00000538596 GPR101Q96P66 508 aaPredicted RBP13.52□□□□□ -0.25
CPNE8-203ENST00000538596 ZCCHC17Q9NP64 241 aaKnown RBP13.52□□□□□ -0.25
CPNE8-203ENST00000538596 ARPP21Q9UBL0 812 aaPredicted RBP13.52□□□□□ -0.25
CPNE8-203ENST00000538596 THRAP3Q9Y2W1 955 aaKnown RBP13.52□□□□□ -0.25
CPNE8-203ENST00000538596 SPATA31A5Q5VU36 1347 aa13.52□□□□□ -0.25
CPNE8-203ENST00000538596 SPATA31A7Q8IWB4 1347 aa13.52□□□□□ -0.25
CPNE8-203ENST00000538596 KCNJ18B7U540 433 aa13.51□□□□□ -0.25
CPNE8-203ENST00000538596 PMS1P54277 932 aaKnown RBP13.51□□□□□ -0.25
CPNE8-203ENST00000538596 KCNJ12Q14500 433 aa13.51□□□□□ -0.25
CPNE8-203ENST00000538596 TCP11X2Q5H9J9 407 aa13.51□□□□□ -0.25
CPNE8-203ENST00000538596 DZIP1Q86YF9 867 aaKnown RBP13.51□□□□□ -0.25
CPNE8-203ENST00000538596 NUP88Q99567 741 aaPredicted RBP13.51□□□□□ -0.25
CPNE8-203ENST00000538596 LIMA1Q9UHB6 759 aaKnown RBP13.51□□□□□ -0.25
CPNE8-203ENST00000538596 RWDD2AQ9UIY3 292 aa13.51□□□□□ -0.25
CPNE8-203ENST00000538596 GOLGA8HP0CJ92 632 aa13.51□□□□□ -0.25
CPNE8-203ENST00000538596 STAT6P42226 847 aa13.51□□□□□ -0.25
CPNE8-203ENST00000538596 INF2Q27J81 1249 aa13.51□□□□□ -0.25
CPNE8-203ENST00000538596 NAALADL2Q58DX5 795 aa13.51□□□□□ -0.25
CPNE8-203ENST00000538596 GPR161Q8N6U8 529 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms