RNA–Protein interactions for RNA: ENST00000515835.2

PDE4D-225, Transcript of phosphodiesterase 4D, humanhuman

TSL 4 BASIC

Gene PDE4D, Length 590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-225ENST00000515835 DUOX2Q9NRD8 1548 aa9.19□□□□□ -0.94
PDE4D-225ENST00000515835 EIF2AK4Q9P2K8 1649 aaKnown RBP9.19□□□□□ -0.94
PDE4D-225ENST00000515835 FAM170BA6NMN3 283 aa9.18□□□□□ -0.94
PDE4D-225ENST00000515835 IMPDH2P12268 514 aa9.18□□□□□ -0.94
PDE4D-225ENST00000515835 SOX9P48436 509 aa9.18□□□□□ -0.94
PDE4D-225ENST00000515835 LRRFIP1Q32MZ4 808 aaKnown RBP9.18□□□□□ -0.94
PDE4D-225ENST00000515835 SLFN12Q8IYM2 578 aa9.18□□□□□ -0.94
PDE4D-225ENST00000515835 LTBP4Q8N2S1 1624 aa9.18□□□□□ -0.94
PDE4D-225ENST00000515835 FAM13CQ8NE31 585 aa9.18□□□□□ -0.94
PDE4D-225ENST00000515835 ERBINQ96RT1 1412 aa9.18□□□□□ -0.94
PDE4D-225ENST00000515835 GINM1Q9NU53 330 aa9.18□□□□□ -0.94
PDE4D-225ENST00000515835 RNF17Q9BXT8 1623 aaKnown RBP9.17□□□□□ -0.94
PDE4D-225ENST00000515835 ABCC5O15440 1437 aa9.17□□□□□ -0.94
PDE4D-225ENST00000515835 FGD6Q6ZV73 1430 aa9.17□□□□□ -0.94
PDE4D-225ENST00000515835 KIF15Q9NS87 1388 aa9.17□□□□□ -0.94
PDE4D-225ENST00000515835 ZNF765Q7L2R6 523 aa9.17□□□□□ -0.94
PDE4D-225ENST00000515835 SEC16BQ96JE7 1060 aa9.17□□□□□ -0.94
PDE4D-225ENST00000515835 CAPN10Q9HC96 672 aa9.17□□□□□ -0.94
PDE4D-225ENST00000515835 GMIPQ9P107 970 aa9.17□□□□□ -0.94
PDE4D-225ENST00000515835 ZNRF3Q9ULT6 936 aa9.17□□□□□ -0.94
PDE4D-225ENST00000515835 EFR3BQ9Y2G0 817 aa9.17□□□□□ -0.94
PDE4D-225ENST00000515835 ABCC3O15438 1527 aa9.16□□□□□ -0.94
PDE4D-225ENST00000515835 DAPK1P53355 1430 aa9.16□□□□□ -0.94
PDE4D-225ENST00000515835 ARHGAP31Q2M1Z3 1444 aa9.16□□□□□ -0.94
PDE4D-225ENST00000515835 PRR19A6NJB7 356 aa9.16□□□□□ -0.94
PDE4D-225ENST00000515835 SLC22A31A6NKX4 558 aa9.16□□□□□ -0.94
PDE4D-225ENST00000515835 LEFTY1O75610 366 aa9.16□□□□□ -0.94
PDE4D-225ENST00000515835 SLITRK5O94991 958 aa9.16□□□□□ -0.94
PDE4D-225ENST00000515835 ANKLE2Q86XL3 938 aa9.16□□□□□ -0.94
PDE4D-225ENST00000515835 VPS37DQ86XT2 251 aa9.16□□□□□ -0.94
PDE4D-225ENST00000515835 FERD3LQ96RJ6 166 aa9.16□□□□□ -0.94
PDE4D-225ENST00000515835 DPH2Q9BQC3 489 aaPredicted RBP9.16□□□□□ -0.94
PDE4D-225ENST00000515835 TINF2Q9BSI4 451 aa9.16□□□□□ -0.94
PDE4D-225ENST00000515835 KLHL3Q9UH77 587 aa9.16□□□□□ -0.94
PDE4D-225ENST00000515835 RNF112Q9ULX5 631 aa9.16□□□□□ -0.94
PDE4D-225ENST00000515835 LEMD3Q9Y2U8 911 aa9.16□□□□□ -0.94
PDE4D-225ENST00000515835 ZC3H13Q5T200 1668 aaKnown RBP9.16□□□□□ -0.94
PDE4D-225ENST00000515835 DNMT1P26358 1616 aaKnown RBP9.16□□□□□ -0.94
PDE4D-225ENST00000515835 UPK3BL1B0FP48 263 aa9.15□□□□□ -0.94
PDE4D-225ENST00000515835 CHURC1-FNTBB4DL54 471 aa9.15□□□□□ -0.94
PDE4D-225ENST00000515835 UPK3BL2E5RIL1 263 aa9.15□□□□□ -0.94
PDE4D-225ENST00000515835 DNAJA2O60884 412 aa9.15□□□□□ -0.94
PDE4D-225ENST00000515835 ZC3H6P61129 1189 aaKnown RBP9.15□□□□□ -0.94
PDE4D-225ENST00000515835 LETMD1Q6P1Q0 360 aa9.15□□□□□ -0.94
PDE4D-225ENST00000515835 CYB5D2Q8WUJ1 264 aa9.15□□□□□ -0.94
PDE4D-225ENST00000515835 MIPEPQ99797 713 aa9.15□□□□□ -0.94
PDE4D-225ENST00000515835 PIM2Q9P1W9 311 aa9.15□□□□□ -0.94
PDE4D-225ENST00000515835 PTPN23Q9H3S7 1636 aa9.15□□□□□ -0.94
PDE4D-225ENST00000515835 SPATA31D1Q6ZQQ2 1576 aa9.15□□□□□ -0.95
PDE4D-225ENST00000515835 ANKRD30AQ9BXX3 1397 aa9.14□□□□□ -0.95
PDE4D-225ENST00000515835 ZNF335Q9H4Z2 1342 aaPredicted RBP9.14□□□□□ -0.95
PDE4D-225ENST00000515835 MEIS3P2A8K0S8 358 aa9.14□□□□□ -0.95
PDE4D-225ENST00000515835 CDCP2Q5VXM1 449 aa9.14□□□□□ -0.95
PDE4D-225ENST00000515835 ZNF746Q6NUN9 644 aaPredicted RBP9.14□□□□□ -0.95
PDE4D-225ENST00000515835 SLC43A3Q8NBI5 491 aa9.14□□□□□ -0.95
PDE4D-225ENST00000515835 XAGE3Q8WTP9 111 aa9.14□□□□□ -0.95
PDE4D-225ENST00000515835 TMEM40Q8WWA1 233 aa9.14□□□□□ -0.95
PDE4D-225ENST00000515835 GTF2IRD1Q9UHL9 959 aa9.14□□□□□ -0.95
PDE4D-225ENST00000515835 PPT2Q9UMR5 302 aa9.14□□□□□ -0.95
PDE4D-225ENST00000515835 UGGT1Q9NYU2 1555 aa9.14□□□□□ -0.95
PDE4D-225ENST00000515835 MED14O60244 1454 aa9.14□□□□□ -0.95
PDE4D-225ENST00000515835 ERVK-7P63135 1459 aa9.14□□□□□ -0.95
PDE4D-225ENST00000515835 KANK1Q14678 1352 aa9.13□□□□□ -0.95
PDE4D-225ENST00000515835 MROH1Q8NDA8 1641 aa9.13□□□□□ -0.95
PDE4D-225ENST00000515835 EOMESO95936 686 aa9.13□□□□□ -0.95
PDE4D-225ENST00000515835 TGFB1P01137 390 aa9.13□□□□□ -0.95
PDE4D-225ENST00000515835 ATF4P18848 351 aaPredicted RBP9.13□□□□□ -0.95
PDE4D-225ENST00000515835 NASPP49321 788 aaPredicted RBP9.13□□□□□ -0.95
PDE4D-225ENST00000515835 OVOS1Q6IE37 1185 aa9.13□□□□□ -0.95
PDE4D-225ENST00000515835 FAM214BQ7L5A3 538 aa9.13□□□□□ -0.95
PDE4D-225ENST00000515835 RBBP8NLQ8NC74 664 aaPredicted RBP9.13□□□□□ -0.95
PDE4D-225ENST00000515835 CNNM2Q9H8M5 875 aa9.13□□□□□ -0.95
PDE4D-225ENST00000515835 RRP7BPQ9NSQ0 103 aa9.13□□□□□ -0.95
PDE4D-225ENST00000515835 PRDM15P57071 1507 aaPredicted RBP9.13□□□□□ -0.95
PDE4D-225ENST00000515835 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.12□□□□□ -0.95
PDE4D-225ENST00000515835 IGF2BP3O00425 579 aaKnown RBP eCLIP9.12□□□□□ -0.95
PDE4D-225ENST00000515835 ATG4CQ96DT6 458 aa9.12□□□□□ -0.95
PDE4D-225ENST00000515835 CCDC74BQ96LY2 380 aa9.12□□□□□ -0.95
PDE4D-225ENST00000515835 C8orf37Q96NL8 207 aa9.12□□□□□ -0.95
PDE4D-225ENST00000515835 STRIP2Q9ULQ0 834 aa9.12□□□□□ -0.95
PDE4D-225ENST00000515835 CEP131Q9UPN4 1083 aa9.12□□□□□ -0.95
PDE4D-225ENST00000515835 ADGRL2O95490 1459 aa9.12□□□□□ -0.95
PDE4D-225ENST00000515835 DEPDC5O75140 1603 aa9.12□□□□□ -0.95
PDE4D-225ENST00000515835 CPS1P31327 1500 aa9.11□□□□□ -0.95
PDE4D-225ENST00000515835 LMTK2Q8IWU2 1503 aa9.11□□□□□ -0.95
PDE4D-225ENST00000515835 CYP26A1O43174 497 aa9.11□□□□□ -0.95
PDE4D-225ENST00000515835 FOSL1P15407 271 aa9.11□□□□□ -0.95
PDE4D-225ENST00000515835 RAG1P15918 1043 aa9.11□□□□□ -0.95
PDE4D-225ENST00000515835 GRIK1P39086 918 aa9.11□□□□□ -0.95
PDE4D-225ENST00000515835 ARSHQ5FYA8 562 aa9.11□□□□□ -0.95
PDE4D-225ENST00000515835 FBXW10Q5XX13 1052 aa9.11□□□□□ -0.95
PDE4D-225ENST00000515835 INTS5Q6P9B9 1019 aaKnown RBP9.11□□□□□ -0.95
PDE4D-225ENST00000515835 NLRC3Q7RTR2 1065 aa9.11□□□□□ -0.95
PDE4D-225ENST00000515835 PHACTR4Q8IZ21 702 aa9.11□□□□□ -0.95
PDE4D-225ENST00000515835 DNAJB8Q8NHS0 232 aa9.11□□□□□ -0.95
PDE4D-225ENST00000515835 RIN3Q8TB24 985 aa9.11□□□□□ -0.95
PDE4D-225ENST00000515835 COX4I2Q96KJ9 171 aa9.11□□□□□ -0.95
PDE4D-225ENST00000515835 HEXIM2Q96MH2 286 aaKnown RBP9.11□□□□□ -0.95
PDE4D-225ENST00000515835 SRRTQ9BXP5 876 aaKnown RBP9.11□□□□□ -0.95
PDE4D-225ENST00000515835 MKNK2Q9HBH9 465 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms