RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 APEX2Q9UBZ4 518 aa7.83□□□□□ -1.16
HMGCS1-207ENST00000514610 ST14Q9Y5Y6 855 aa7.83□□□□□ -1.16
HMGCS1-207ENST00000514610 CYP26A1O43174 497 aa7.82□□□□□ -1.16
HMGCS1-207ENST00000514610 CEACAM5P06731 702 aa7.82□□□□□ -1.16
HMGCS1-207ENST00000514610 FOSL1P15407 271 aa7.82□□□□□ -1.16
HMGCS1-207ENST00000514610 GIMAP6Q6P9H5 292 aa7.82□□□□□ -1.16
HMGCS1-207ENST00000514610 SPATC1Q76KD6 591 aa7.82□□□□□ -1.16
HMGCS1-207ENST00000514610 EEPD1Q7L9B9 569 aa7.82□□□□□ -1.16
HMGCS1-207ENST00000514610 Q8N3U1 123 aa7.82□□□□□ -1.16
HMGCS1-207ENST00000514610 LGR4Q9BXB1 951 aa7.82□□□□□ -1.16
HMGCS1-207ENST00000514610 MKNK2Q9HBH9 465 aa7.82□□□□□ -1.16
HMGCS1-207ENST00000514610 ZC3H7BQ9UGR2 993 aaKnown RBP7.82□□□□□ -1.16
HMGCS1-207ENST00000514610 FBXL21Q9UKT6 434 aa7.82□□□□□ -1.16
HMGCS1-207ENST00000514610 MINPP1Q9UNW1 487 aa7.82□□□□□ -1.16
HMGCS1-207ENST00000514610 PCDHB12Q9Y5F1 795 aa7.82□□□□□ -1.16
HMGCS1-207ENST00000514610 ANKRD34BA5PLL1 514 aa7.81□□□□□ -1.16
HMGCS1-207ENST00000514610 SRFP11831 508 aa7.81□□□□□ -1.16
HMGCS1-207ENST00000514610 ZNF445P59923 1031 aa7.81□□□□□ -1.16
HMGCS1-207ENST00000514610 CDKAL1Q5VV42 579 aa7.81□□□□□ -1.16
HMGCS1-207ENST00000514610 ARHGAP27Q6ZUM4 889 aa7.81□□□□□ -1.16
HMGCS1-207ENST00000514610 PIWIL2Q8TC59 973 aaKnown RBP7.81□□□□□ -1.16
HMGCS1-207ENST00000514610 MRFAP1L1Q96HT8 127 aa7.81□□□□□ -1.16
HMGCS1-207ENST00000514610 DNAJC7Q99615 494 aa7.81□□□□□ -1.16
HMGCS1-207ENST00000514610 DUSP15Q9H1R2 295 aaPredicted RBP7.81□□□□□ -1.16
HMGCS1-207ENST00000514610 GFOD1Q9NXC2 390 aa7.81□□□□□ -1.16
HMGCS1-207ENST00000514610 KCNH3Q9ULD8 1083 aa7.81□□□□□ -1.16
HMGCS1-207ENST00000514610 WASH4PA8MWX3 477 aa7.8□□□□□ -1.16
HMGCS1-207ENST00000514610 FAM155AB1AL88 458 aaPredicted RBP7.8□□□□□ -1.16
HMGCS1-207ENST00000514610 DIAPH1O60610 1272 aaKnown RBP7.8□□□□□ -1.16
HMGCS1-207ENST00000514610 ZNF143P52747 638 aaPredicted RBP7.8□□□□□ -1.16
HMGCS1-207ENST00000514610 NMIQ13287 307 aaPredicted RBP7.8□□□□□ -1.16
HMGCS1-207ENST00000514610 ST13P5Q8NFI4 369 aaPredicted RBP7.8□□□□□ -1.16
HMGCS1-207ENST00000514610 ADCY4Q8NFM4 1077 aa7.8□□□□□ -1.16
HMGCS1-207ENST00000514610 BRF1Q92994 677 aa7.8□□□□□ -1.16
HMGCS1-207ENST00000514610 HSPA12BQ96MM6 686 aa7.8□□□□□ -1.16
HMGCS1-207ENST00000514610 GPR62Q9BZJ7 368 aa7.8□□□□□ -1.16
HMGCS1-207ENST00000514610 PFDN2Q9UHV9 154 aa7.8□□□□□ -1.16
HMGCS1-207ENST00000514610 ZMYM5Q9UJ78 669 aa7.8□□□□□ -1.16
HMGCS1-207ENST00000514610 SIGLEC6O43699 453 aa7.79□□□□□ -1.16
HMGCS1-207ENST00000514610 PRAMEF1O95521 474 aa7.79□□□□□ -1.16
HMGCS1-207ENST00000514610 TCEAL1Q15170 157 aa7.79□□□□□ -1.16
HMGCS1-207ENST00000514610 MSMPQ1L6U9 139 aa7.79□□□□□ -1.16
HMGCS1-207ENST00000514610 MTERF2Q49AM1 385 aa7.79□□□□□ -1.16
HMGCS1-207ENST00000514610 NOP9Q86U38 636 aaKnown RBP7.79□□□□□ -1.16
HMGCS1-207ENST00000514610 JAZF1Q86VZ6 243 aa7.79□□□□□ -1.16
HMGCS1-207ENST00000514610 LILRB2Q8N423 598 aa7.79□□□□□ -1.16
HMGCS1-207ENST00000514610 NETO1Q8TDF5 533 aa7.79□□□□□ -1.16
HMGCS1-207ENST00000514610 APBA2Q99767 749 aa7.79□□□□□ -1.16
HMGCS1-207ENST00000514610 HDAC8Q9BY41 377 aa7.79□□□□□ -1.16
HMGCS1-207ENST00000514610 SEMA3GQ9NS98 782 aa7.79□□□□□ -1.16
HMGCS1-207ENST00000514610 WHRNQ9P202 907 aa7.79□□□□□ -1.16
HMGCS1-207ENST00000514610 H3BS24 57 aa7.78□□□□□ -1.16
HMGCS1-207ENST00000514610 ITGA4P13612 1032 aa7.78□□□□□ -1.16
HMGCS1-207ENST00000514610 ADAT2Q7Z6V5 191 aaKnown RBP7.78□□□□□ -1.16
HMGCS1-207ENST00000514610 GBP3Q9H0R5 595 aa7.78□□□□□ -1.16
HMGCS1-207ENST00000514610 EPN3Q9H201 632 aa7.78□□□□□ -1.16
HMGCS1-207ENST00000514610 PRR13Q9NZ81 148 aa7.78□□□□□ -1.16
HMGCS1-207ENST00000514610 FHOD1Q9Y613 1164 aa7.78□□□□□ -1.16
HMGCS1-207ENST00000514610 MEIS1O00470 390 aa7.77□□□□□ -1.17
HMGCS1-207ENST00000514610 MED26O95402 600 aa7.77□□□□□ -1.17
HMGCS1-207ENST00000514610 CTSKP43235 329 aa7.77□□□□□ -1.17
HMGCS1-207ENST00000514610 CLCN7P51798 805 aa7.77□□□□□ -1.17
HMGCS1-207ENST00000514610 IFRD2Q12894 506 aaPredicted RBP7.77□□□□□ -1.17
HMGCS1-207ENST00000514610 IFI16Q16666 785 aaKnown RBP7.77□□□□□ -1.17
HMGCS1-207ENST00000514610 SV2CQ496J9 727 aa7.77□□□□□ -1.17
HMGCS1-207ENST00000514610 SYTL5Q8TDW5 730 aaPredicted RBP7.77□□□□□ -1.17
HMGCS1-207ENST00000514610 NOL6Q9H6R4 1146 aaKnown RBP7.77□□□□□ -1.17
HMGCS1-207ENST00000514610 KANSL2Q9H9L4 492 aa7.77□□□□□ -1.17
HMGCS1-207ENST00000514610 CHST7Q9NS84 486 aa7.77□□□□□ -1.17
HMGCS1-207ENST00000514610 CGGBP1Q9UFW8 167 aaPredicted RBP7.77□□□□□ -1.17
HMGCS1-207ENST00000514610 TBX22Q9Y458 520 aa7.77□□□□□ -1.17
HMGCS1-207ENST00000514610 PITPNM2Q9BZ72 1349 aa7.77□□□□□ -1.17
HMGCS1-207ENST00000514610 A0A087WZG4 1122 aa7.76□□□□□ -1.17
HMGCS1-207ENST00000514610 TBX1O43435 398 aa7.76□□□□□ -1.17
HMGCS1-207ENST00000514610 PPM1BO75688 479 aa7.76□□□□□ -1.17
HMGCS1-207ENST00000514610 ITGAVP06756 1048 aa7.76□□□□□ -1.17
HMGCS1-207ENST00000514610 NAT2P11245 290 aa7.76□□□□□ -1.17
HMGCS1-207ENST00000514610 SSRP1Q08945 709 aaKnown RBP7.76□□□□□ -1.17
HMGCS1-207ENST00000514610 NOL9Q5SY16 702 aaKnown RBP7.76□□□□□ -1.17
HMGCS1-207ENST00000514610 ZNF227Q86WZ6 799 aa7.76□□□□□ -1.17
HMGCS1-207ENST00000514610 ARHGEF39Q8N4T4 335 aa7.76□□□□□ -1.17
HMGCS1-207ENST00000514610 FIBCD1Q8N539 461 aa7.76□□□□□ -1.17
HMGCS1-207ENST00000514610 ZNF669Q96BR6 464 aaPredicted RBP7.76□□□□□ -1.17
HMGCS1-207ENST00000514610 ZSWIM5Q9P217 1185 aa7.76□□□□□ -1.17
HMGCS1-207ENST00000514610 TMEM265A0A087WTH1 108 aa7.75□□□□□ -1.17
HMGCS1-207ENST00000514610 A0A1W2PQU0 124 aa7.75□□□□□ -1.17
HMGCS1-207ENST00000514610 H0Y8X5 98 aa7.75□□□□□ -1.17
HMGCS1-207ENST00000514610 ADCY3O60266 1144 aa7.75□□□□□ -1.17
HMGCS1-207ENST00000514610 PPP2R5DQ14738 602 aa7.75□□□□□ -1.17
HMGCS1-207ENST00000514610 GAB4Q2WGN9 574 aa7.75□□□□□ -1.17
HMGCS1-207ENST00000514610 TSPYL5Q86VY4 417 aaPredicted RBP7.75□□□□□ -1.17
HMGCS1-207ENST00000514610 LRRN4CLQ8ND94 238 aa7.75□□□□□ -1.17
HMGCS1-207ENST00000514610 UBE2FQ969M7 185 aa7.75□□□□□ -1.17
HMGCS1-207ENST00000514610 PPP1R14AQ96A00 147 aa7.75□□□□□ -1.17
HMGCS1-207ENST00000514610 RCC1LQ96I51 464 aaKnown RBP7.75□□□□□ -1.17
HMGCS1-207ENST00000514610 MRGPRX3Q96LB0 322 aa7.75□□□□□ -1.17
HMGCS1-207ENST00000514610 RNPC3Q96LT9 517 aaKnown RBP7.75□□□□□ -1.17
HMGCS1-207ENST00000514610 SPATA9Q9BWV2 254 aa7.75□□□□□ -1.17
HMGCS1-207ENST00000514610 ASCC2Q9H1I8 757 aaPredicted RBP7.75□□□□□ -1.17
HMGCS1-207ENST00000514610 RNF112Q9ULX5 631 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms