RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 RABGAP1Q9Y3P9 1069 aa4.09□□□□□ -1.75
CHD1-211ENST00000514344 LOC400499M0QZD8 3231 aa4.09□□□□□ -1.75
CHD1-211ENST00000514344 MYH2Q9UKX2 1941 aa4.09□□□□□ -1.76
CHD1-211ENST00000514344 FRYQ5TBA9 3013 aa4.09□□□□□ -1.76
CHD1-211ENST00000514344 RFX7Q2KHR2 1363 aa4.09□□□□□ -1.76
CHD1-211ENST00000514344 SNPHO15079 494 aa4.08□□□□□ -1.76
CHD1-211ENST00000514344 LPXNO60711 386 aa4.08□□□□□ -1.76
CHD1-211ENST00000514344 IRS1P35568 1242 aa4.08□□□□□ -1.76
CHD1-211ENST00000514344 KCTD2Q14681 263 aa4.08□□□□□ -1.76
CHD1-211ENST00000514344 LINS1Q8NG48 757 aa4.08□□□□□ -1.76
CHD1-211ENST00000514344 KLHDC4Q8TBB5 520 aa4.08□□□□□ -1.76
CHD1-211ENST00000514344 EMILIN3Q9NT22 766 aa4.08□□□□□ -1.76
CHD1-211ENST00000514344 ABCF2Q9UG63 623 aa4.08□□□□□ -1.76
CHD1-211ENST00000514344 MROH5Q6ZUA9 1318 aa4.08□□□□□ -1.76
CHD1-211ENST00000514344 CEP250Q9BV73 2442 aa4.08□□□□□ -1.76
CHD1-211ENST00000514344 MYADML2A6NDP7 307 aa4.08□□□□□ -1.76
CHD1-211ENST00000514344 GRXCR2A6NFK2 248 aa4.08□□□□□ -1.76
CHD1-211ENST00000514344 F6X3S4 739 aa4.08□□□□□ -1.76
CHD1-211ENST00000514344 KDM4AO75164 1064 aa4.08□□□□□ -1.76
CHD1-211ENST00000514344 PDE8BO95263 885 aa4.08□□□□□ -1.76
CHD1-211ENST00000514344 ASNSP08243 561 aa4.08□□□□□ -1.76
CHD1-211ENST00000514344 C6orf222P0C671 652 aaPredicted RBP4.08□□□□□ -1.76
CHD1-211ENST00000514344 BTDP43251 543 aa4.08□□□□□ -1.76
CHD1-211ENST00000514344 ZP2Q05996 745 aa4.08□□□□□ -1.76
CHD1-211ENST00000514344 PLS1Q14651 629 aa4.08□□□□□ -1.76
CHD1-211ENST00000514344 TTLL4Q14679 1199 aa4.08□□□□□ -1.76
CHD1-211ENST00000514344 OLFML2BQ68BL8 750 aa4.08□□□□□ -1.76
CHD1-211ENST00000514344 DEFB128Q7Z7B8 93 aa4.08□□□□□ -1.76
CHD1-211ENST00000514344 DZIP1Q86YF9 867 aaKnown RBP4.08□□□□□ -1.76
CHD1-211ENST00000514344 DNAAF4Q8WXU2 420 aa4.08□□□□□ -1.76
CHD1-211ENST00000514344 FEZ1Q99689 392 aa4.08□□□□□ -1.76
CHD1-211ENST00000514344 GAKO14976 1311 aa4.08□□□□□ -1.76
CHD1-211ENST00000514344 MROH7Q68CQ1 1323 aa4.08□□□□□ -1.76
CHD1-211ENST00000514344 ZZEF1O43149 2961 aa4.08□□□□□ -1.76
CHD1-211ENST00000514344 MYO7AQ13402 2215 aa4.08□□□□□ -1.76
CHD1-211ENST00000514344 USP24Q9UPU5 2620 aa4.08□□□□□ -1.76
CHD1-211ENST00000514344 C19orf81C9J6K1 198 aa4.08□□□□□ -1.76
CHD1-211ENST00000514344 TBC1D12O60347 775 aa4.08□□□□□ -1.76
CHD1-211ENST00000514344 ADAMTS4O75173 837 aa4.08□□□□□ -1.76
CHD1-211ENST00000514344 IGHA2P01877 340 aa4.08□□□□□ -1.76
CHD1-211ENST00000514344 ASGR1P07306 291 aa4.08□□□□□ -1.76
CHD1-211ENST00000514344 IFIT1P09914 478 aaKnown RBP4.08□□□□□ -1.76
CHD1-211ENST00000514344 ERCC3P19447 782 aa4.08□□□□□ -1.76
CHD1-211ENST00000514344 LEXMQ3ZCV2 418 aa4.08□□□□□ -1.76
CHD1-211ENST00000514344 TMCO2Q7Z6W1 182 aaPredicted RBP4.08□□□□□ -1.76
CHD1-211ENST00000514344 FAM126BQ8IXS8 530 aa4.08□□□□□ -1.76
CHD1-211ENST00000514344 GTF3C2Q8WUA4 911 aaPredicted RBP4.08□□□□□ -1.76
CHD1-211ENST00000514344 MAML3Q96JK9 1138 aa4.08□□□□□ -1.76
CHD1-211ENST00000514344 WDR18Q9BV38 432 aa4.08□□□□□ -1.76
CHD1-211ENST00000514344 TBC1D2Q9BYX2 928 aa4.08□□□□□ -1.76
CHD1-211ENST00000514344 COL4A4P53420 1690 aaPredicted RBP4.07□□□□□ -1.76
CHD1-211ENST00000514344 SYNRGQ9UMZ2 1314 aa4.07□□□□□ -1.76
CHD1-211ENST00000514344 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.07□□□□□ -1.76
CHD1-211ENST00000514344 PGK2P07205 417 aa4.07□□□□□ -1.76
CHD1-211ENST00000514344 VCPP55072 806 aaKnown RBP4.07□□□□□ -1.76
CHD1-211ENST00000514344 FLIIQ13045 1269 aa4.07□□□□□ -1.76
CHD1-211ENST00000514344 NCAPG2Q86XI2 1143 aa4.07□□□□□ -1.76
CHD1-211ENST00000514344 MOV10L1Q9BXT6 1211 aaKnown RBP4.07□□□□□ -1.76
CHD1-211ENST00000514344 LCHNA4D1U4 455 aa4.07□□□□□ -1.76
CHD1-211ENST00000514344 PRR23AA6NEV1 266 aa4.07□□□□□ -1.76
CHD1-211ENST00000514344 SPDYE16A6NNV3 312 aaPredicted RBP4.07□□□□□ -1.76
CHD1-211ENST00000514344 TLR3O15455 904 aaKnown RBP4.07□□□□□ -1.76
CHD1-211ENST00000514344 AKR1A1P14550 325 aa4.07□□□□□ -1.76
CHD1-211ENST00000514344 CLUL1Q15846 466 aa4.07□□□□□ -1.76
CHD1-211ENST00000514344 DGLUCYQ7Z3D6 616 aa4.07□□□□□ -1.76
CHD1-211ENST00000514344 VGLL2Q8N8G2 317 aa4.07□□□□□ -1.76
CHD1-211ENST00000514344 PRRX2Q99811 253 aa4.07□□□□□ -1.76
CHD1-211ENST00000514344 FSD1Q9BTV5 496 aa4.07□□□□□ -1.76
CHD1-211ENST00000514344 WNT8AQ9H1J5 351 aa4.07□□□□□ -1.76
CHD1-211ENST00000514344 SLC5A4Q9NY91 659 aa4.07□□□□□ -1.76
CHD1-211ENST00000514344 C9orf78Q9NZ63 289 aaPredicted RBP4.07□□□□□ -1.76
CHD1-211ENST00000514344 PLXNA3P51805 1871 aa4.07□□□□□ -1.76
CHD1-211ENST00000514344 GPR179Q6PRD1 2367 aa4.06□□□□□ -1.76
CHD1-211ENST00000514344 MOXD2PA6NHM9 499 aa4.06□□□□□ -1.76
CHD1-211ENST00000514344 USP17L15C9J2P7 530 aa4.06□□□□□ -1.76
CHD1-211ENST00000514344 USP17L13C9JLJ4 530 aa4.06□□□□□ -1.76
CHD1-211ENST00000514344 USP17L11C9JVI0 530 aa4.06□□□□□ -1.76
CHD1-211ENST00000514344 USP17L18D6R9N7 530 aa4.06□□□□□ -1.76
CHD1-211ENST00000514344 USP17L22D6RA61 530 aa4.06□□□□□ -1.76
CHD1-211ENST00000514344 USP17L17D6RBQ6 530 aa4.06□□□□□ -1.76
CHD1-211ENST00000514344 USP17L19D6RCP7 530 aa4.06□□□□□ -1.76
CHD1-211ENST00000514344 USP17L20D6RJB6 530 aa4.06□□□□□ -1.76
CHD1-211ENST00000514344 ARVCFO00192 962 aa4.06□□□□□ -1.76
CHD1-211ENST00000514344 GRM8O00222 908 aa4.06□□□□□ -1.76
CHD1-211ENST00000514344 STRNO43815 780 aa4.06□□□□□ -1.76
CHD1-211ENST00000514344 VCAM1P19320 739 aa4.06□□□□□ -1.76
CHD1-211ENST00000514344 CDK7P50613 346 aa4.06□□□□□ -1.76
CHD1-211ENST00000514344 USP17L24Q0WX57 530 aa4.06□□□□□ -1.76
CHD1-211ENST00000514344 MKRN4PQ13434 485 aaPredicted RBP4.06□□□□□ -1.76
CHD1-211ENST00000514344 PUM3Q15397 648 aaKnown RBP4.06□□□□□ -1.76
CHD1-211ENST00000514344 GNASQ5JWF2 1037 aa4.06□□□□□ -1.76
CHD1-211ENST00000514344 RNF135Q8IUD6 432 aa4.06□□□□□ -1.76
CHD1-211ENST00000514344 CRACR2BQ8N4Y2 399 aaPredicted RBP4.06□□□□□ -1.76
CHD1-211ENST00000514344 RMDN1Q96DB5 314 aa4.06□□□□□ -1.76
CHD1-211ENST00000514344 UPF3BQ9BZI7 483 aaKnown RBP4.06□□□□□ -1.76
CHD1-211ENST00000514344 SUGCTQ9HAC7 445 aa4.06□□□□□ -1.76
CHD1-211ENST00000514344 FAM208BQ5VWN6 2430 aa4.06□□□□□ -1.76
CHD1-211ENST00000514344 FLNBO75369 2602 aaKnown RBP4.06□□□□□ -1.76
CHD1-211ENST00000514344 A0A0U1RQG5 324 aaPredicted RBP4.06□□□□□ -1.76
CHD1-211ENST00000514344 TMEM221A6NGB7 291 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms