RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 RABGGTBP53611 331 aa4.82□□□□□ -1.64
RNF4-211ENST00000509206 BACE1P56817 501 aa4.82□□□□□ -1.64
RNF4-211ENST00000509206 FAAP100Q0VG06 881 aa4.82□□□□□ -1.64
RNF4-211ENST00000509206 MTMR2Q13614 643 aa4.82□□□□□ -1.64
RNF4-211ENST00000509206 TMEM67Q5HYA8 995 aa4.82□□□□□ -1.64
RNF4-211ENST00000509206 METTL24Q5JXM2 366 aa4.82□□□□□ -1.64
RNF4-211ENST00000509206 SLF2Q8IX21 1173 aa4.82□□□□□ -1.64
RNF4-211ENST00000509206 TRPV1Q8NER1 839 aa4.82□□□□□ -1.64
RNF4-211ENST00000509206 ARNTL2Q8WYA1 636 aa4.82□□□□□ -1.64
RNF4-211ENST00000509206 ATOH1Q92858 354 aaPredicted RBP4.82□□□□□ -1.64
RNF4-211ENST00000509206 TATDN2Q93075 761 aa4.82□□□□□ -1.64
RNF4-211ENST00000509206 TOX2Q96NM4 488 aa4.82□□□□□ -1.64
RNF4-211ENST00000509206 UPF3BQ9BZI7 483 aaKnown RBP4.82□□□□□ -1.64
RNF4-211ENST00000509206 PPP1R12CQ9BZL4 782 aa4.82□□□□□ -1.64
RNF4-211ENST00000509206 IRF2BPLQ9H1B7 796 aa4.82□□□□□ -1.64
RNF4-211ENST00000509206 CD320Q9NPF0 282 aa4.82□□□□□ -1.64
RNF4-211ENST00000509206 XPNPEP3Q9NQH7 507 aa4.82□□□□□ -1.64
RNF4-211ENST00000509206 MBIPQ9NS73 344 aa4.82□□□□□ -1.64
RNF4-211ENST00000509206 GNL3LQ9NVN8 582 aaKnown RBP4.82□□□□□ -1.64
RNF4-211ENST00000509206 RABGEF1Q9UJ41 708 aa4.82□□□□□ -1.64
RNF4-211ENST00000509206 PHF24Q9UPV7 400 aa4.82□□□□□ -1.64
RNF4-211ENST00000509206 YBX2Q9Y2T7 364 aaKnown RBP4.82□□□□□ -1.64
RNF4-211ENST00000509206 RABGAP1Q9Y3P9 1069 aa4.82□□□□□ -1.64
RNF4-211ENST00000509206 ARAP2Q8WZ64 1704 aa4.82□□□□□ -1.64
RNF4-211ENST00000509206 SPEF2Q9C093 1822 aa4.81□□□□□ -1.64
RNF4-211ENST00000509206 MROH7Q68CQ1 1323 aa4.81□□□□□ -1.64
RNF4-211ENST00000509206 A0A1W2PQ45 241 aaPredicted RBP4.81□□□□□ -1.64
RNF4-211ENST00000509206 A0A1W2PQY0 241 aa4.81□□□□□ -1.64
RNF4-211ENST00000509206 DDTLA6NHG4 134 aaPredicted RBP4.81□□□□□ -1.64
RNF4-211ENST00000509206 HRO43593 1189 aa4.81□□□□□ -1.64
RNF4-211ENST00000509206 STRNO43815 780 aa4.81□□□□□ -1.64
RNF4-211ENST00000509206 CYBAP13498 195 aa4.81□□□□□ -1.64
RNF4-211ENST00000509206 MYOGP15173 224 aa4.81□□□□□ -1.64
RNF4-211ENST00000509206 CAP2P40123 477 aa4.81□□□□□ -1.64
RNF4-211ENST00000509206 ID4P47928 161 aa4.81□□□□□ -1.64
RNF4-211ENST00000509206 GNAI1P63096 354 aa4.81□□□□□ -1.64
RNF4-211ENST00000509206 MAP3K10Q02779 954 aa4.81□□□□□ -1.64
RNF4-211ENST00000509206 CALD1Q05682 793 aaKnown RBP4.81□□□□□ -1.64
RNF4-211ENST00000509206 FKBP5Q13451 457 aaPredicted RBP4.81□□□□□ -1.64
RNF4-211ENST00000509206 PUS10Q3MIT2 529 aaKnown RBP4.81□□□□□ -1.64
RNF4-211ENST00000509206 PRAMEF19Q5SWL8 479 aa4.81□□□□□ -1.64
RNF4-211ENST00000509206 USP17L2Q6R6M4 530 aa4.81□□□□□ -1.64
RNF4-211ENST00000509206 EP400NLQ6ZTU2 488 aa4.81□□□□□ -1.64
RNF4-211ENST00000509206 C16orf59Q7L2K0 433 aa4.81□□□□□ -1.64
RNF4-211ENST00000509206 OTOP2Q7RTS6 562 aa4.81□□□□□ -1.64
RNF4-211ENST00000509206 DZIP1Q86YF9 867 aaKnown RBP4.81□□□□□ -1.64
RNF4-211ENST00000509206 SUGP1Q8IWZ8 645 aaKnown RBP4.81□□□□□ -1.64
RNF4-211ENST00000509206 FAM178BQ8IXR5 827 aa4.81□□□□□ -1.64
RNF4-211ENST00000509206 CCDC146Q8IYE0 955 aa4.81□□□□□ -1.64
RNF4-211ENST00000509206 RPUSD2Q8IZ73 545 aaKnown RBP4.81□□□□□ -1.64
RNF4-211ENST00000509206 NPLOC4Q8TAT6 608 aa4.81□□□□□ -1.64
RNF4-211ENST00000509206 SPIRE2Q8WWL2 714 aa4.81□□□□□ -1.64
RNF4-211ENST00000509206 KCTD12Q96CX2 325 aaKnown RBP4.81□□□□□ -1.64
RNF4-211ENST00000509206 IDI2Q9BXS1 227 aa4.81□□□□□ -1.64
RNF4-211ENST00000509206 TMEM134Q9H6X4 195 aa4.81□□□□□ -1.64
RNF4-211ENST00000509206 C1orf115Q9H7X2 142 aa4.81□□□□□ -1.64
RNF4-211ENST00000509206 IL23AQ9NPF7 189 aa4.81□□□□□ -1.64
RNF4-211ENST00000509206 C9orf78Q9NZ63 289 aaPredicted RBP4.81□□□□□ -1.64
RNF4-211ENST00000509206 KIAA1468Q9P260 1216 aa4.81□□□□□ -1.64
RNF4-211ENST00000509206 FAM50BQ9Y247 325 aa4.81□□□□□ -1.64
RNF4-211ENST00000509206 PCDHA11Q9Y5I1 949 aa4.81□□□□□ -1.64
RNF4-211ENST00000509206 PTPRZ1P23471 2315 aaPredicted RBP4.81□□□□□ -1.64
RNF4-211ENST00000509206 DNAH12Q6ZR08 3092 aa4.81□□□□□ -1.64
RNF4-211ENST00000509206 DLG5Q8TDM6 1919 aa4.8□□□□□ -1.64
RNF4-211ENST00000509206 ZNF536O15090 1300 aa4.8□□□□□ -1.64
RNF4-211ENST00000509206 FAM196BA6NMK8 535 aa4.8□□□□□ -1.64
RNF4-211ENST00000509206 USP17L15C9J2P7 530 aa4.8□□□□□ -1.64
RNF4-211ENST00000509206 USP17L13C9JLJ4 530 aa4.8□□□□□ -1.64
RNF4-211ENST00000509206 USP17L11C9JVI0 530 aa4.8□□□□□ -1.64
RNF4-211ENST00000509206 USP17L18D6R9N7 530 aa4.8□□□□□ -1.64
RNF4-211ENST00000509206 USP17L22D6RA61 530 aa4.8□□□□□ -1.64
RNF4-211ENST00000509206 USP17L17D6RBQ6 530 aa4.8□□□□□ -1.64
RNF4-211ENST00000509206 USP17L19D6RCP7 530 aa4.8□□□□□ -1.64
RNF4-211ENST00000509206 USP17L20D6RJB6 530 aa4.8□□□□□ -1.64
RNF4-211ENST00000509206 TRAK2O60296 914 aa4.8□□□□□ -1.64
RNF4-211ENST00000509206 PGK1P00558 417 aa4.8□□□□□ -1.64
RNF4-211ENST00000509206 ASNSP08243 561 aa4.8□□□□□ -1.64
RNF4-211ENST00000509206 HOXC6P09630 235 aa4.8□□□□□ -1.64
RNF4-211ENST00000509206 SLURP2P0DP57 97 aa4.8□□□□□ -1.64
RNF4-211ENST00000509206 ATP2A2P16615 1042 aaKnown RBP4.8□□□□□ -1.64
RNF4-211ENST00000509206 POU3F3P20264 500 aaPredicted RBP4.8□□□□□ -1.64
RNF4-211ENST00000509206 KCNA5P22460 613 aa4.8□□□□□ -1.64
RNF4-211ENST00000509206 RFC5P40937 340 aa4.8□□□□□ -1.64
RNF4-211ENST00000509206 FOXO4P98177 505 aa4.8□□□□□ -1.64
RNF4-211ENST00000509206 USP17L24Q0WX57 530 aa4.8□□□□□ -1.64
RNF4-211ENST00000509206 GRB14Q14449 540 aa4.8□□□□□ -1.64
RNF4-211ENST00000509206 PKN1Q16512 942 aa4.8□□□□□ -1.64
RNF4-211ENST00000509206 FAM47AQ5JRC9 791 aa4.8□□□□□ -1.64
RNF4-211ENST00000509206 RASIP1Q5U651 963 aa4.8□□□□□ -1.64
RNF4-211ENST00000509206 OLFML2BQ68BL8 750 aa4.8□□□□□ -1.64
RNF4-211ENST00000509206 KRT40Q6A162 431 aa4.8□□□□□ -1.64
RNF4-211ENST00000509206 PTCRAQ6ISU1 281 aaPredicted RBP4.8□□□□□ -1.64
RNF4-211ENST00000509206 HFE2Q6ZVN8 426 aa4.8□□□□□ -1.64
RNF4-211ENST00000509206 ANKRD33Q7Z3H0 272 aa4.8□□□□□ -1.64
RNF4-211ENST00000509206 ZGPATQ8N5A5 531 aaKnown RBP4.8□□□□□ -1.64
RNF4-211ENST00000509206 LINS1Q8NG48 757 aa4.8□□□□□ -1.64
RNF4-211ENST00000509206 DNAAF4Q8WXU2 420 aa4.8□□□□□ -1.64
RNF4-211ENST00000509206 GLT1D1Q96MS3 346 aa4.8□□□□□ -1.64
RNF4-211ENST00000509206 FEZ1Q99689 392 aa4.8□□□□□ -1.64
RNF4-211ENST00000509206 ARID3AQ99856 593 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms