RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 FAM47AQ5JRC9 791 aa23.52■■□□□ 1.36
SFXN1-209ENST00000508290 FAM83BQ5T0W9 1011 aa23.52■■□□□ 1.36
SFXN1-209ENST00000508290 MFSD6Q6ZSS7 791 aa23.52■■□□□ 1.36
SFXN1-209ENST00000508290 STAG1Q8WVM7 1258 aa23.52■■□□□ 1.36
SFXN1-209ENST00000508290 A0A0G2JMZ2 1700 aa23.52■■□□□ 1.36
SFXN1-209ENST00000508290 SLC25A27O95847 323 aa23.51■■□□□ 1.35
SFXN1-209ENST00000508290 INHAP05111 366 aa23.51■■□□□ 1.35
SFXN1-209ENST00000508290 GJB1P08034 283 aa23.51■■□□□ 1.35
SFXN1-209ENST00000508290 MORN1Q5T089 497 aa23.51■■□□□ 1.35
SFXN1-209ENST00000508290 AKNAD1Q5T1N1 836 aa23.51■■□□□ 1.35
SFXN1-209ENST00000508290 PRPF38AQ8NAV1 312 aaKnown RBP23.51■■□□□ 1.35
SFXN1-209ENST00000508290 USP6NLQ92738 828 aa23.51■■□□□ 1.35
SFXN1-209ENST00000508290 ATG4CQ96DT6 458 aa23.51■■□□□ 1.35
SFXN1-209ENST00000508290 APBA2Q99767 749 aa23.51■■□□□ 1.35
SFXN1-209ENST00000508290 SLF1Q9BQI6 1058 aa23.51■■□□□ 1.35
SFXN1-209ENST00000508290 TCP11L1Q9NUJ3 509 aa23.51■■□□□ 1.35
SFXN1-209ENST00000508290 STX8Q9UNK0 236 aa23.51■■□□□ 1.35
SFXN1-209ENST00000508290 POTEFA5A3E0 1075 aa23.5■■□□□ 1.35
SFXN1-209ENST00000508290 FDX1P10109 184 aa23.5■■□□□ 1.35
SFXN1-209ENST00000508290 CCL5P13501 91 aa23.5■■□□□ 1.35
SFXN1-209ENST00000508290 ELNP15502 786 aa23.5■■□□□ 1.35
SFXN1-209ENST00000508290 PTPREP23469 700 aa23.5■■□□□ 1.35
SFXN1-209ENST00000508290 NOVP48745 357 aa23.5■■□□□ 1.35
SFXN1-209ENST00000508290 MAP2K5Q13163 448 aa23.5■■□□□ 1.35
SFXN1-209ENST00000508290 GMCL1Q96IK5 515 aa23.5■■□□□ 1.35
SFXN1-209ENST00000508290 MOV10L1Q9BXT6 1211 aaKnown RBP23.5■■□□□ 1.35
SFXN1-209ENST00000508290 TOMM22Q9NS69 142 aa23.5■■□□□ 1.35
SFXN1-209ENST00000508290 FEM1BQ9UK73 627 aa23.5■■□□□ 1.35
SFXN1-209ENST00000508290 VWA5AO00534 786 aa23.49■■□□□ 1.35
SFXN1-209ENST00000508290 HOXC6P09630 235 aa23.49■■□□□ 1.35
SFXN1-209ENST00000508290 IMMTQ16891 758 aaKnown RBP23.49■■□□□ 1.35
SFXN1-209ENST00000508290 WDR78Q5VTH9 848 aa23.49■■□□□ 1.35
SFXN1-209ENST00000508290 ABRAQ8N0Z2 381 aa23.49■■□□□ 1.35
SFXN1-209ENST00000508290 ESR2Q92731 530 aa23.49■■□□□ 1.35
SFXN1-209ENST00000508290 RNF208Q9H0X6 261 aa23.49■■□□□ 1.35
SFXN1-209ENST00000508290 PEX10O60683 326 aa23.48■■□□□ 1.35
SFXN1-209ENST00000508290 ZKSCAN1P17029 563 aaPredicted RBP23.48■■□□□ 1.35
SFXN1-209ENST00000508290 GJA8P48165 433 aa23.48■■□□□ 1.35
SFXN1-209ENST00000508290 GRB14Q14449 540 aa23.48■■□□□ 1.35
SFXN1-209ENST00000508290 MTFR1Q15390 333 aa23.48■■□□□ 1.35
SFXN1-209ENST00000508290 CCDC178Q5BJE1 867 aa23.48■■□□□ 1.35
SFXN1-209ENST00000508290 SLFN13Q68D06 897 aa23.48■■□□□ 1.35
SFXN1-209ENST00000508290 LRRC47Q8N1G4 583 aaKnown RBP23.48■■□□□ 1.35
SFXN1-209ENST00000508290 TTC14Q96N46 770 aa23.48■■□□□ 1.35
SFXN1-209ENST00000508290 SLC5A4Q9NY91 659 aa23.48■■□□□ 1.35
SFXN1-209ENST00000508290 NEFLP07196 543 aa23.47■■□□□ 1.35
SFXN1-209ENST00000508290 BMP3P12645 472 aa23.47■■□□□ 1.35
SFXN1-209ENST00000508290 CYP2B6P20813 491 aa23.47■■□□□ 1.35
SFXN1-209ENST00000508290 CHMLP26374 656 aa23.47■■□□□ 1.35
SFXN1-209ENST00000508290 IL17RBQ9NRM6 502 aa23.47■■□□□ 1.35
SFXN1-209ENST00000508290 FBXO28Q9NVF7 368 aa23.47■■□□□ 1.35
SFXN1-209ENST00000508290 RLFQ13129 1914 aa23.47■■□□□ 1.35
SFXN1-209ENST00000508290 ATP2A1O14983 1001 aa23.46■■□□□ 1.35
SFXN1-209ENST00000508290 PLA2G6O60733 806 aa23.46■■□□□ 1.35
SFXN1-209ENST00000508290 ERCC3P19447 782 aa23.46■■□□□ 1.35
SFXN1-209ENST00000508290 HAND2P61296 217 aa23.46■■□□□ 1.35
SFXN1-209ENST00000508290 PLS1Q14651 629 aa23.46■■□□□ 1.35
SFXN1-209ENST00000508290 TMEM132BQ14DG7 1078 aa23.46■■□□□ 1.35
SFXN1-209ENST00000508290 RRP12Q5JTH9 1297 aaKnown RBP23.46■■□□□ 1.35
SFXN1-209ENST00000508290 FAM160B2Q86V87 743 aa23.46■■□□□ 1.35
SFXN1-209ENST00000508290 RIOX2Q8IUF8 465 aa23.46■■□□□ 1.35
SFXN1-209ENST00000508290 RPTORQ8N122 1335 aa23.46■■□□□ 1.35
SFXN1-209ENST00000508290 CHURC1Q8WUH1 139 aa23.46■■□□□ 1.35
SFXN1-209ENST00000508290 TEX13BQ9BXU2 312 aa23.46■■□□□ 1.35
SFXN1-209ENST00000508290 CNNM2Q9H8M5 875 aa23.46■■□□□ 1.35
SFXN1-209ENST00000508290 PAK6Q9NQU5 681 aaPredicted RBP23.46■■□□□ 1.35
SFXN1-209ENST00000508290 CTDP1Q9Y5B0 961 aaPredicted RBP23.46■■□□□ 1.35
SFXN1-209ENST00000508290 ZBED4O75132 1171 aa23.45■■□□□ 1.34
SFXN1-209ENST00000508290 MYCP01106 439 aaPredicted RBP23.45■■□□□ 1.34
SFXN1-209ENST00000508290 TOP1P11387 765 aaKnown RBP23.45■■□□□ 1.34
SFXN1-209ENST00000508290 EN2P19622 333 aaPredicted RBP23.45■■□□□ 1.34
SFXN1-209ENST00000508290 STAT3P40763 770 aa23.45■■□□□ 1.34
SFXN1-209ENST00000508290 SLC1A4P43007 532 aa23.45■■□□□ 1.34
SFXN1-209ENST00000508290 STAT2P52630 851 aa23.45■■□□□ 1.34
SFXN1-209ENST00000508290 OAZ1P54368 228 aa23.45■■□□□ 1.34
SFXN1-209ENST00000508290 RCSD1Q6JBY9 416 aa23.45■■□□□ 1.34
SFXN1-209ENST00000508290 TBC1D10CQ8IV04 446 aa23.45■■□□□ 1.34
SFXN1-209ENST00000508290 TRIB2Q92519 343 aa23.45■■□□□ 1.34
SFXN1-209ENST00000508290 NUP88Q99567 741 aaPredicted RBP23.45■■□□□ 1.34
SFXN1-209ENST00000508290 HMX1Q9NP08 348 aaPredicted RBP23.45■■□□□ 1.34
SFXN1-209ENST00000508290 ZNF214Q9UL59 606 aaPredicted RBP23.45■■□□□ 1.34
SFXN1-209ENST00000508290 ZNF236Q9UL36 1845 aa23.45■■□□□ 1.34
SFXN1-209ENST00000508290 FCER1AP12319 257 aa23.44■■□□□ 1.34
SFXN1-209ENST00000508290 MAP3K21Q5TCX8 1036 aa23.44■■□□□ 1.34
SFXN1-209ENST00000508290 SAMD1Q6SPF0 538 aaPredicted RBP23.44■■□□□ 1.34
SFXN1-209ENST00000508290 IQCA1Q86XH1 822 aa23.44■■□□□ 1.34
SFXN1-209ENST00000508290 NCAPG2Q86XI2 1143 aa23.44■■□□□ 1.34
SFXN1-209ENST00000508290 NBPF3Q9H094 633 aa23.44■■□□□ 1.34
SFXN1-209ENST00000508290 UNC93B1Q9H1C4 597 aa23.44■■□□□ 1.34
SFXN1-209ENST00000508290 INCENPQ9NQS7 918 aa23.44■■□□□ 1.34
SFXN1-209ENST00000508290 CENPFP49454 3210 aa23.44■■□□□ 1.34
SFXN1-209ENST00000508290 SGPL1O95470 568 aa23.43■■□□□ 1.34
SFXN1-209ENST00000508290 MFSD14CQ5VZR4 134 aa23.43■■□□□ 1.34
SFXN1-209ENST00000508290 DPP9Q86TI2 863 aa23.43■■□□□ 1.34
SFXN1-209ENST00000508290 REPS2Q8NFH8 660 aa23.43■■□□□ 1.34
SFXN1-209ENST00000508290 U2AF1L4Q8WU68 220 aaKnown RBP23.43■■□□□ 1.34
SFXN1-209ENST00000508290 DCAF4Q8WV16 495 aa23.43■■□□□ 1.34
SFXN1-209ENST00000508290 KRT23Q9C075 422 aa23.43■■□□□ 1.34
SFXN1-209ENST00000508290 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.43■■□□□ 1.34
SFXN1-209ENST00000508290 TACC3Q9Y6A5 838 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms