RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 USP17L11C9JVI0 530 aa9.09□□□□□ -0.95
COL9A1-209ENST00000489861 USP17L18D6R9N7 530 aa9.09□□□□□ -0.95
COL9A1-209ENST00000489861 USP17L22D6RA61 530 aa9.09□□□□□ -0.95
COL9A1-209ENST00000489861 USP17L17D6RBQ6 530 aa9.09□□□□□ -0.95
COL9A1-209ENST00000489861 USP17L19D6RCP7 530 aa9.09□□□□□ -0.95
COL9A1-209ENST00000489861 USP17L20D6RJB6 530 aa9.09□□□□□ -0.95
COL9A1-209ENST00000489861 GDF11O95390 407 aa9.09□□□□□ -0.95
COL9A1-209ENST00000489861 CD4P01730 458 aa9.09□□□□□ -0.95
COL9A1-209ENST00000489861 KCNA5P22460 613 aa9.09□□□□□ -0.95
COL9A1-209ENST00000489861 USP17L24Q0WX57 530 aa9.09□□□□□ -0.95
COL9A1-209ENST00000489861 ZYXQ15942 572 aaKnown RBP9.09□□□□□ -0.95
COL9A1-209ENST00000489861 PTCRAQ6ISU1 281 aaPredicted RBP9.09□□□□□ -0.95
COL9A1-209ENST00000489861 USP17L2Q6R6M4 530 aa9.09□□□□□ -0.95
COL9A1-209ENST00000489861 CATSPERGQ6ZRH7 1159 aa9.09□□□□□ -0.95
COL9A1-209ENST00000489861 KLHDC9Q8NEP7 349 aa9.09□□□□□ -0.95
COL9A1-209ENST00000489861 ZNF384Q8TF68 577 aa9.09□□□□□ -0.95
COL9A1-209ENST00000489861 NUP133Q8WUM0 1156 aa9.09□□□□□ -0.95
COL9A1-209ENST00000489861 HERC5Q9UII4 1024 aaKnown RBP9.09□□□□□ -0.95
COL9A1-209ENST00000489861 MROH7-TTC4A0A0A0MT08 1334 aa9.08□□□□□ -0.96
COL9A1-209ENST00000489861 MROH7Q68CQ1 1323 aa9.08□□□□□ -0.96
COL9A1-209ENST00000489861 SYNRGQ9UMZ2 1314 aa9.08□□□□□ -0.96
COL9A1-209ENST00000489861 COL11A1P12107 1806 aaPredicted RBP9.08□□□□□ -0.96
COL9A1-209ENST00000489861 GPR75-ASB3A0A0A6YYF3 556 aa9.08□□□□□ -0.96
COL9A1-209ENST00000489861 MOXD2PA6NHM9 499 aa9.08□□□□□ -0.96
COL9A1-209ENST00000489861 ZBBXA8MT70 800 aa9.08□□□□□ -0.96
COL9A1-209ENST00000489861 STRNO43815 780 aa9.08□□□□□ -0.96
COL9A1-209ENST00000489861 ZNF865P0CJ78 1059 aaPredicted RBP9.08□□□□□ -0.96
COL9A1-209ENST00000489861 ERCC3P19447 782 aa9.08□□□□□ -0.96
COL9A1-209ENST00000489861 CCL23P55773 120 aa9.08□□□□□ -0.96
COL9A1-209ENST00000489861 TTLL4Q14679 1199 aa9.08□□□□□ -0.96
COL9A1-209ENST00000489861 TSR2Q969E8 191 aaKnown RBP9.08□□□□□ -0.96
COL9A1-209ENST00000489861 C12orf42Q96LP6 360 aa9.08□□□□□ -0.96
COL9A1-209ENST00000489861 ZBTB21Q9ULJ3 1066 aa9.08□□□□□ -0.96
COL9A1-209ENST00000489861 ROBO3Q96MS0 1386 aa9.08□□□□□ -0.96
COL9A1-209ENST00000489861 FOCADQ5VW36 1801 aa9.08□□□□□ -0.96
COL9A1-209ENST00000489861 ANKRD11Q6UB99 2663 aaPredicted RBP9.08□□□□□ -0.96
COL9A1-209ENST00000489861 ELP1O95163 1332 aa9.07□□□□□ -0.96
COL9A1-209ENST00000489861 MED19A0JLT2 244 aaPredicted RBP9.07□□□□□ -0.96
COL9A1-209ENST00000489861 ARVCFO00192 962 aa9.07□□□□□ -0.96
COL9A1-209ENST00000489861 PHKA1P46020 1223 aa9.07□□□□□ -0.96
COL9A1-209ENST00000489861 ZP2Q05996 745 aa9.07□□□□□ -0.96
COL9A1-209ENST00000489861 ASCL5Q7RTU5 278 aa9.07□□□□□ -0.96
COL9A1-209ENST00000489861 DZIP1Q86YF9 867 aaKnown RBP9.07□□□□□ -0.96
COL9A1-209ENST00000489861 GDPD5Q8WTR4 605 aa9.07□□□□□ -0.96
COL9A1-209ENST00000489861 LPIN2Q92539 896 aa9.07□□□□□ -0.96
COL9A1-209ENST00000489861 CDCA7LQ96GN5 454 aa9.07□□□□□ -0.96
COL9A1-209ENST00000489861 GLT1D1Q96MS3 346 aa9.07□□□□□ -0.96
COL9A1-209ENST00000489861 WNT8AQ9H1J5 351 aa9.07□□□□□ -0.96
COL9A1-209ENST00000489861 BICC1Q9H694 974 aaKnown RBP9.07□□□□□ -0.96
COL9A1-209ENST00000489861 NRBP1Q9UHY1 535 aa9.07□□□□□ -0.96
COL9A1-209ENST00000489861 PARP14Q460N5 1801 aa9.07□□□□□ -0.96
COL9A1-209ENST00000489861 SIP14410 1827 aa9.06□□□□□ -0.96
COL9A1-209ENST00000489861 C19orf67A6NJJ6 358 aa9.06□□□□□ -0.96
COL9A1-209ENST00000489861 NBPF7P0C2Y1 421 aaPredicted RBP9.06□□□□□ -0.96
COL9A1-209ENST00000489861 VCAM1P19320 739 aa9.06□□□□□ -0.96
COL9A1-209ENST00000489861 IRS1P35568 1242 aa9.06□□□□□ -0.96
COL9A1-209ENST00000489861 ID4P47928 161 aa9.06□□□□□ -0.96
COL9A1-209ENST00000489861 TWISTNBQ3B726 338 aaPredicted RBP9.06□□□□□ -0.96
COL9A1-209ENST00000489861 RABL6Q3YEC7 729 aaPredicted RBP9.06□□□□□ -0.96
COL9A1-209ENST00000489861 ANKRD44Q8N8A2 993 aa9.06□□□□□ -0.96
COL9A1-209ENST00000489861 SPATC1LQ9H0A9 340 aa9.06□□□□□ -0.96
COL9A1-209ENST00000489861 HIPK3Q9H422 1215 aa9.06□□□□□ -0.96
COL9A1-209ENST00000489861 PRKRIP1Q9H875 184 aaPredicted RBP9.06□□□□□ -0.96
COL9A1-209ENST00000489861 C9orf78Q9NZ63 289 aaPredicted RBP9.06□□□□□ -0.96
COL9A1-209ENST00000489861 PI4KBQ9UBF8 816 aa9.06□□□□□ -0.96
COL9A1-209ENST00000489861 ABCF2Q9UG63 623 aa9.06□□□□□ -0.96
COL9A1-209ENST00000489861 ADAMTS8Q9UP79 889 aa9.06□□□□□ -0.96
COL9A1-209ENST00000489861 USP24Q9UPU5 2620 aa9.06□□□□□ -0.96
COL9A1-209ENST00000489861 ZNF536O15090 1300 aa9.05□□□□□ -0.96
COL9A1-209ENST00000489861 TRIP12Q14669 1992 aaPredicted RBP9.05□□□□□ -0.96
COL9A1-209ENST00000489861 A0A0U1RQG5 324 aaPredicted RBP9.05□□□□□ -0.96
COL9A1-209ENST00000489861 SOWAHBA6NEL2 793 aa9.05□□□□□ -0.96
COL9A1-209ENST00000489861 TLR3O15455 904 aaKnown RBP9.05□□□□□ -0.96
COL9A1-209ENST00000489861 ASGR1P07306 291 aa9.05□□□□□ -0.96
COL9A1-209ENST00000489861 AKR1A1P14550 325 aa9.05□□□□□ -0.96
COL9A1-209ENST00000489861 MECOMQ03112 1051 aa9.05□□□□□ -0.96
COL9A1-209ENST00000489861 BMP8AQ7Z5Y6 402 aa9.05□□□□□ -0.96
COL9A1-209ENST00000489861 METTL16Q86W50 562 aaKnown RBP9.05□□□□□ -0.96
COL9A1-209ENST00000489861 SHCBP1Q8NEM2 672 aa9.05□□□□□ -0.96
COL9A1-209ENST00000489861 ACER1Q8TDN7 264 aa9.05□□□□□ -0.96
COL9A1-209ENST00000489861 VTI1AQ96AJ9 217 aa9.05□□□□□ -0.96
COL9A1-209ENST00000489861 SCLYQ96I15 445 aa9.05□□□□□ -0.96
COL9A1-209ENST00000489861 TINF2Q9BSI4 451 aa9.05□□□□□ -0.96
COL9A1-209ENST00000489861 NOC4LQ9BVI4 516 aaKnown RBP9.05□□□□□ -0.96
COL9A1-209ENST00000489861 SLC5A4Q9NY91 659 aa9.05□□□□□ -0.96
COL9A1-209ENST00000489861 LMCD1Q9NZU5 365 aa9.05□□□□□ -0.96
COL9A1-209ENST00000489861 MUTYHQ9UIF7 546 aa9.05□□□□□ -0.96
COL9A1-209ENST00000489861 DENND2AQ9ULE3 1009 aa9.05□□□□□ -0.96
COL9A1-209ENST00000489861 MYH1P12882 1939 aa9.04□□□□□ -0.96
COL9A1-209ENST00000489861 H3BQ06 376 aaPredicted RBP9.04□□□□□ -0.96
COL9A1-209ENST00000489861 APAF1O14727 1248 aa9.04□□□□□ -0.96
COL9A1-209ENST00000489861 ADCY6O43306 1168 aa9.04□□□□□ -0.96
COL9A1-209ENST00000489861 GH2P01242 217 aa9.04□□□□□ -0.96
COL9A1-209ENST00000489861 PGK2P07205 417 aa9.04□□□□□ -0.96
COL9A1-209ENST00000489861 CST5P28325 142 aaPredicted RBP9.04□□□□□ -0.96
COL9A1-209ENST00000489861 HERC4Q5GLZ8 1057 aaPredicted RBP9.04□□□□□ -0.96
COL9A1-209ENST00000489861 SLF2Q8IX21 1173 aa9.04□□□□□ -0.96
COL9A1-209ENST00000489861 ABRAQ8N0Z2 381 aa9.04□□□□□ -0.96
COL9A1-209ENST00000489861 NEK9Q8TD19 979 aa9.04□□□□□ -0.96
COL9A1-209ENST00000489861 SP7Q8TDD2 431 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms