RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 ISCA1Q9BUE6 129 aa11.45□□□□□ -0.58
COMMD4-203ENST00000480484 NBPF3Q9H094 633 aa11.45□□□□□ -0.58
COMMD4-203ENST00000480484 BRMS1Q9HCU9 246 aa11.45□□□□□ -0.58
COMMD4-203ENST00000480484 CDC23Q9UJX2 597 aa11.45□□□□□ -0.58
COMMD4-203ENST00000480484 BCL9LQ86UU0 1499 aa11.45□□□□□ -0.58
COMMD4-203ENST00000480484 CORO7P57737 925 aa11.45□□□□□ -0.58
COMMD4-203ENST00000480484 C1QBPQ07021 282 aaKnown RBP11.45□□□□□ -0.58
COMMD4-203ENST00000480484 CCDC96Q2M329 555 aa11.45□□□□□ -0.58
COMMD4-203ENST00000480484 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.45□□□□□ -0.58
COMMD4-203ENST00000480484 SMYD4Q8IYR2 804 aaPredicted RBP11.45□□□□□ -0.58
COMMD4-203ENST00000480484 ZNF274Q96GC6 653 aaPredicted RBP11.45□□□□□ -0.58
COMMD4-203ENST00000480484 NCAPGQ9BPX3 1015 aa11.45□□□□□ -0.58
COMMD4-203ENST00000480484 BEGAINQ9BUH8 593 aa11.45□□□□□ -0.58
COMMD4-203ENST00000480484 RABEP2Q9H5N1 569 aa11.45□□□□□ -0.58
COMMD4-203ENST00000480484 BTG4Q9NY30 223 aa11.45□□□□□ -0.58
COMMD4-203ENST00000480484 BAZ2BQ9UIF8 2168 aaKnown RBP11.44□□□□□ -0.58
COMMD4-203ENST00000480484 SH3TC1Q8TE82 1336 aa11.44□□□□□ -0.58
COMMD4-203ENST00000480484 CASZ1Q86V15 1759 aa11.44□□□□□ -0.58
COMMD4-203ENST00000480484 CFAP69A5D8W1 941 aa11.44□□□□□ -0.58
COMMD4-203ENST00000480484 FGAP02671 866 aa11.44□□□□□ -0.58
COMMD4-203ENST00000480484 TCIRG1Q13488 830 aa11.44□□□□□ -0.58
COMMD4-203ENST00000480484 AMOTL1Q8IY63 956 aa11.44□□□□□ -0.58
COMMD4-203ENST00000480484 GDAP1L1Q96MZ0 367 aa11.44□□□□□ -0.58
COMMD4-203ENST00000480484 SLC4A9Q96Q91 983 aa11.44□□□□□ -0.58
COMMD4-203ENST00000480484 TUBE1Q9UJT0 475 aa11.44□□□□□ -0.58
COMMD4-203ENST00000480484 TACC3Q9Y6A5 838 aa11.44□□□□□ -0.58
COMMD4-203ENST00000480484 MYH15Q9Y2K3 1946 aa11.44□□□□□ -0.58
COMMD4-203ENST00000480484 POTEB2H3BUK9 544 aa11.44□□□□□ -0.58
COMMD4-203ENST00000480484 VAMP1P23763 118 aa11.44□□□□□ -0.58
COMMD4-203ENST00000480484 AKAP17AQ02040 695 aaKnown RBP11.44□□□□□ -0.58
COMMD4-203ENST00000480484 ZMYM1Q5SVZ6 1142 aa11.44□□□□□ -0.58
COMMD4-203ENST00000480484 BRAPQ7Z569 592 aa11.44□□□□□ -0.58
COMMD4-203ENST00000480484 METTL16Q86W50 562 aaKnown RBP11.44□□□□□ -0.58
COMMD4-203ENST00000480484 NT5DC4Q86YG4 428 aa11.44□□□□□ -0.58
COMMD4-203ENST00000480484 HNRNPLLQ8WVV9 542 aaKnown RBP11.44□□□□□ -0.58
COMMD4-203ENST00000480484 STAMQ92783 540 aa11.44□□□□□ -0.58
COMMD4-203ENST00000480484 ZKSCAN3Q9BRR0 538 aa11.44□□□□□ -0.58
COMMD4-203ENST00000480484 LRP5O75197 1615 aa11.44□□□□□ -0.58
COMMD4-203ENST00000480484 FAM205CA6NFA0 338 aa11.43□□□□□ -0.58
COMMD4-203ENST00000480484 CCDC57Q2TAC2 916 aa11.43□□□□□ -0.58
COMMD4-203ENST00000480484 MAP9Q49MG5 647 aa11.43□□□□□ -0.58
COMMD4-203ENST00000480484 LDLRAD1Q5T700 205 aa11.43□□□□□ -0.58
COMMD4-203ENST00000480484 CYB5R4Q7L1T6 521 aa11.43□□□□□ -0.58
COMMD4-203ENST00000480484 MICU3Q86XE3 530 aa11.43□□□□□ -0.58
COMMD4-203ENST00000480484 FAM71BQ8TC56 605 aa11.43□□□□□ -0.58
COMMD4-203ENST00000480484 ARHGEF10LQ9HCE6 1279 aa11.43□□□□□ -0.58
COMMD4-203ENST00000480484 CTAGE15A4D2H0 777 aa11.43□□□□□ -0.58
COMMD4-203ENST00000480484 CTAGE9A4FU28 777 aa11.43□□□□□ -0.58
COMMD4-203ENST00000480484 LRRIQ3A6PVS8 624 aaPredicted RBP11.43□□□□□ -0.58
COMMD4-203ENST00000480484 PRC1O43663 620 aa11.43□□□□□ -0.58
COMMD4-203ENST00000480484 RNF40O75150 1001 aa11.43□□□□□ -0.58
COMMD4-203ENST00000480484 CTAGE8P0CG41 777 aa11.43□□□□□ -0.58
COMMD4-203ENST00000480484 KIF23Q02241 960 aaPredicted RBP11.43□□□□□ -0.58
COMMD4-203ENST00000480484 SLC39A14Q15043 492 aa11.43□□□□□ -0.58
COMMD4-203ENST00000480484 CCDC102BQ68D86 513 aa11.43□□□□□ -0.58
COMMD4-203ENST00000480484 CTAGE6Q86UF2 777 aa11.43□□□□□ -0.58
COMMD4-203ENST00000480484 CTAGE4Q8IX94 777 aa11.43□□□□□ -0.58
COMMD4-203ENST00000480484 XAGE2Q96GT9 111 aa11.43□□□□□ -0.58
COMMD4-203ENST00000480484 CDC5LQ99459 802 aaKnown RBP11.43□□□□□ -0.58
COMMD4-203ENST00000480484 CEP126Q9P2H0 1117 aa11.43□□□□□ -0.58
COMMD4-203ENST00000480484 GNPATO15228 680 aa11.43□□□□□ -0.58
COMMD4-203ENST00000480484 S100BP04271 92 aaPredicted RBP11.43□□□□□ -0.58
COMMD4-203ENST00000480484 DNAJA1P31689 397 aaKnown RBP11.43□□□□□ -0.58
COMMD4-203ENST00000480484 STX17P56962 302 aa11.43□□□□□ -0.58
COMMD4-203ENST00000480484 TBX2Q13207 712 aaPredicted RBP11.43□□□□□ -0.58
COMMD4-203ENST00000480484 CAMK2BQ13554 666 aa11.43□□□□□ -0.58
COMMD4-203ENST00000480484 RAD9BQ6WBX8 426 aa11.43□□□□□ -0.58
COMMD4-203ENST00000480484 SLC35F6Q8N357 371 aa11.43□□□□□ -0.58
COMMD4-203ENST00000480484 CXorf38Q8TB03 319 aa11.43□□□□□ -0.58
COMMD4-203ENST00000480484 ACBD3Q9H3P7 528 aa11.43□□□□□ -0.58
COMMD4-203ENST00000480484 SAMSN1Q9NSI8 373 aaKnown RBP11.43□□□□□ -0.58
COMMD4-203ENST00000480484 RAI14Q9P0K7 980 aa11.43□□□□□ -0.58
COMMD4-203ENST00000480484 ZMIZ1Q9ULJ6 1067 aa11.43□□□□□ -0.58
COMMD4-203ENST00000480484 KCNJ14Q9UNX9 436 aa11.43□□□□□ -0.58
COMMD4-203ENST00000480484 CTDP1Q9Y5B0 961 aaPredicted RBP11.43□□□□□ -0.58
COMMD4-203ENST00000480484 HMGB1P1B2RPK0 211 aaPredicted RBP11.42□□□□□ -0.58
COMMD4-203ENST00000480484 AKR1B15C9JRZ8 316 aaPredicted RBP11.42□□□□□ -0.58
COMMD4-203ENST00000480484 RNF113AO15541 343 aaKnown RBP11.42□□□□□ -0.58
COMMD4-203ENST00000480484 CDC25AP30304 524 aa11.42□□□□□ -0.58
COMMD4-203ENST00000480484 ZAP70P43403 619 aa11.42□□□□□ -0.58
COMMD4-203ENST00000480484 USP5P45974 858 aa11.42□□□□□ -0.58
COMMD4-203ENST00000480484 LIG3P49916 1009 aa11.42□□□□□ -0.58
COMMD4-203ENST00000480484 DNAJC21Q5F1R6 531 aaKnown RBP11.42□□□□□ -0.58
COMMD4-203ENST00000480484 PPFIBP1Q86W92 1011 aa11.42□□□□□ -0.58
COMMD4-203ENST00000480484 MPHOSPH6Q99547 160 aaKnown RBP11.42□□□□□ -0.58
COMMD4-203ENST00000480484 RFX7Q2KHR2 1363 aa11.42□□□□□ -0.58
COMMD4-203ENST00000480484 TEX33O43247 280 aa11.42□□□□□ -0.58
COMMD4-203ENST00000480484 PPARDQ03181 441 aa11.42□□□□□ -0.58
COMMD4-203ENST00000480484 TBC1D10CQ8IV04 446 aa11.42□□□□□ -0.58
COMMD4-203ENST00000480484 JMYQ8N9B5 988 aa11.42□□□□□ -0.58
COMMD4-203ENST00000480484 NOA1Q8NC60 698 aaKnown RBP11.42□□□□□ -0.58
COMMD4-203ENST00000480484 AFAP1L1Q8TED9 768 aa11.42□□□□□ -0.58
COMMD4-203ENST00000480484 RIN2Q8WYP3 895 aaPredicted RBP11.42□□□□□ -0.58
COMMD4-203ENST00000480484 RAB21Q9UL25 225 aa11.42□□□□□ -0.58
COMMD4-203ENST00000480484 ADGRG1Q9Y653 693 aa11.42□□□□□ -0.58
COMMD4-203ENST00000480484 WNT7AO00755 349 aa11.41□□□□□ -0.58
COMMD4-203ENST00000480484 RPS6KA5O75582 802 aa11.41□□□□□ -0.58
COMMD4-203ENST00000480484 TTC39AQ5SRH9 613 aa11.41□□□□□ -0.58
COMMD4-203ENST00000480484 KLHL10Q6JEL2 608 aa11.41□□□□□ -0.58
COMMD4-203ENST00000480484 TADA2BQ86TJ2 420 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms