RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 MPHOSPH10O00566 681 aaKnown RBP8.26□□□□□ -1.09
LIMD1-204ENST00000474665 RANBP6O60518 1105 aaKnown RBP8.26□□□□□ -1.09
LIMD1-204ENST00000474665 KDM4AO75164 1064 aa8.26□□□□□ -1.09
LIMD1-204ENST00000474665 REC8O95072 547 aa8.26□□□□□ -1.09
LIMD1-204ENST00000474665 GNRH1P01148 92 aa8.26□□□□□ -1.09
LIMD1-204ENST00000474665 SLC3A2P08195 630 aaKnown RBP8.26□□□□□ -1.09
LIMD1-204ENST00000474665 PCP11498 1178 aaKnown RBP8.26□□□□□ -1.09
LIMD1-204ENST00000474665 EEF2P13639 858 aaKnown RBP8.26□□□□□ -1.09
LIMD1-204ENST00000474665 HMGCS2P54868 508 aa8.26□□□□□ -1.09
LIMD1-204ENST00000474665 BACE1P56817 501 aa8.26□□□□□ -1.09
LIMD1-204ENST00000474665 UBXN2AP68543 259 aa8.26□□□□□ -1.09
LIMD1-204ENST00000474665 MTMR2Q13614 643 aa8.26□□□□□ -1.09
LIMD1-204ENST00000474665 SH3D19Q5HYK7 790 aa8.26□□□□□ -1.09
LIMD1-204ENST00000474665 RRP12Q5JTH9 1297 aaKnown RBP8.26□□□□□ -1.09
LIMD1-204ENST00000474665 POTEEQ6S8J3 1075 aa8.26□□□□□ -1.09
LIMD1-204ENST00000474665 PRRT2Q7Z6L0 340 aaPredicted RBP8.26□□□□□ -1.09
LIMD1-204ENST00000474665 ZNF444Q8N0Y2 327 aaPredicted RBP8.26□□□□□ -1.09
LIMD1-204ENST00000474665 TRIM47Q96LD4 638 aa8.26□□□□□ -1.09
LIMD1-204ENST00000474665 SEMA6BQ9H3T3 888 aa8.26□□□□□ -1.09
LIMD1-204ENST00000474665 KANSL2Q9H9L4 492 aa8.26□□□□□ -1.09
LIMD1-204ENST00000474665 GPHNQ9NQX3 736 aaPredicted RBP8.26□□□□□ -1.09
LIMD1-204ENST00000474665 EMILIN3Q9NT22 766 aa8.26□□□□□ -1.09
LIMD1-204ENST00000474665 TCP11L1Q9NUJ3 509 aa8.26□□□□□ -1.09
LIMD1-204ENST00000474665 SNX14Q9Y5W7 946 aa8.26□□□□□ -1.09
LIMD1-204ENST00000474665 CCL15-CCL14A0A0B4J2E2 113 aa8.25□□□□□ -1.09
LIMD1-204ENST00000474665 BTBD19C9JJ37 291 aa8.25□□□□□ -1.09
LIMD1-204ENST00000474665 EPB41L2O43491 1005 aaKnown RBP8.25□□□□□ -1.09
LIMD1-204ENST00000474665 TLR2O60603 784 aa8.25□□□□□ -1.09
LIMD1-204ENST00000474665 TSPY3P0CV98 308 aa8.25□□□□□ -1.09
LIMD1-204ENST00000474665 TSPY8P0CW00 308 aa8.25□□□□□ -1.09
LIMD1-204ENST00000474665 OSBPP22059 807 aa8.25□□□□□ -1.09
LIMD1-204ENST00000474665 PSMC4P43686 418 aa8.25□□□□□ -1.09
LIMD1-204ENST00000474665 GTF2A2P52657 109 aa8.25□□□□□ -1.09
LIMD1-204ENST00000474665 EXOSC10Q01780 885 aaKnown RBP8.25□□□□□ -1.09
LIMD1-204ENST00000474665 ICA1Q05084 483 aa8.25□□□□□ -1.09
LIMD1-204ENST00000474665 SNAPC2Q13487 334 aa8.25□□□□□ -1.09
LIMD1-204ENST00000474665 SEC23AQ15436 765 aa8.25□□□□□ -1.09
LIMD1-204ENST00000474665 CCL15Q16663 113 aa8.25□□□□□ -1.09
LIMD1-204ENST00000474665 TREML2Q5T2D2 321 aa8.25□□□□□ -1.09
LIMD1-204ENST00000474665 RASGRP2Q7LDG7 609 aa8.25□□□□□ -1.09
LIMD1-204ENST00000474665 CHST3Q7LGC8 479 aa8.25□□□□□ -1.09
LIMD1-204ENST00000474665 ANKS1AQ92625 1134 aa8.25□□□□□ -1.09
LIMD1-204ENST00000474665 MKL1Q969V6 931 aa8.25□□□□□ -1.09
LIMD1-204ENST00000474665 IL17RAQ96F46 866 aa8.25□□□□□ -1.09
LIMD1-204ENST00000474665 DEFB118Q96PH6 123 aa8.25□□□□□ -1.09
LIMD1-204ENST00000474665 ZKSCAN3Q9BRR0 538 aa8.25□□□□□ -1.09
LIMD1-204ENST00000474665 KIAA1683Q9H0B3 1180 aa8.25□□□□□ -1.09
LIMD1-204ENST00000474665 RNF41Q9H4P4 317 aaPredicted RBP8.25□□□□□ -1.09
LIMD1-204ENST00000474665 ZNF287Q9HBT7 754 aa8.25□□□□□ -1.09
LIMD1-204ENST00000474665 CABP5Q9NP86 173 aa8.25□□□□□ -1.09
LIMD1-204ENST00000474665 NYAP2Q9P242 653 aa8.25□□□□□ -1.09
LIMD1-204ENST00000474665 TMX2Q9Y320 296 aa8.25□□□□□ -1.09
LIMD1-204ENST00000474665 PRUNE2Q8WUY3 3088 aa8.25□□□□□ -1.09
LIMD1-204ENST00000474665 TSPY2A6NKD2 308 aa8.24□□□□□ -1.09
LIMD1-204ENST00000474665 USP17L10C9JJH3 530 aa8.24□□□□□ -1.09
LIMD1-204ENST00000474665 FMNL1O95466 1100 aaPredicted RBP8.24□□□□□ -1.09
LIMD1-204ENST00000474665 CETPP11597 493 aa8.24□□□□□ -1.09
LIMD1-204ENST00000474665 CPA1P15085 419 aa8.24□□□□□ -1.09
LIMD1-204ENST00000474665 MDM2Q00987 491 aaPredicted RBP8.24□□□□□ -1.09
LIMD1-204ENST00000474665 NECAB2Q7Z6G3 386 aa8.24□□□□□ -1.09
LIMD1-204ENST00000474665 LRRC47Q8N1G4 583 aaKnown RBP8.24□□□□□ -1.09
LIMD1-204ENST00000474665 ENAHQ8N8S7 591 aaPredicted RBP8.24□□□□□ -1.09
LIMD1-204ENST00000474665 USP38Q8NB14 1042 aa8.24□□□□□ -1.09
LIMD1-204ENST00000474665 IGDCC4Q8TDY8 1250 aa8.24□□□□□ -1.09
LIMD1-204ENST00000474665 ESR2Q92731 530 aa8.24□□□□□ -1.09
LIMD1-204ENST00000474665 C12orf42Q96LP6 360 aa8.24□□□□□ -1.09
LIMD1-204ENST00000474665 TCEANC2Q96MN5 208 aa8.24□□□□□ -1.09
LIMD1-204ENST00000474665 KIF2CQ99661 725 aa8.24□□□□□ -1.09
LIMD1-204ENST00000474665 BACH2Q9BYV9 841 aa8.24□□□□□ -1.09
LIMD1-204ENST00000474665 KRT23Q9C075 422 aa8.24□□□□□ -1.09
LIMD1-204ENST00000474665 TOMM22Q9NS69 142 aa8.24□□□□□ -1.09
LIMD1-204ENST00000474665 CLIP2Q9UDT6 1046 aa8.24□□□□□ -1.09
LIMD1-204ENST00000474665 MYPNQ86TC9 1320 aa8.24□□□□□ -1.09
LIMD1-204ENST00000474665 C19orf81C9J6K1 198 aa8.23□□□□□ -1.09
LIMD1-204ENST00000474665 TTLL1O95922 423 aa8.23□□□□□ -1.09
LIMD1-204ENST00000474665 NDUFB10O96000 172 aa8.23□□□□□ -1.09
LIMD1-204ENST00000474665 FOSL2P15408 326 aa8.23□□□□□ -1.09
LIMD1-204ENST00000474665 VCAM1P19320 739 aa8.23□□□□□ -1.09
LIMD1-204ENST00000474665 HOXD10P28358 340 aa8.23□□□□□ -1.09
LIMD1-204ENST00000474665 ZYXQ15942 572 aaKnown RBP8.23□□□□□ -1.09
LIMD1-204ENST00000474665 SPICE1Q8N0Z3 855 aa8.23□□□□□ -1.09
LIMD1-204ENST00000474665 NCOA7Q8NI08 942 aa8.23□□□□□ -1.09
LIMD1-204ENST00000474665 ZSCAN10Q96SZ4 725 aaPredicted RBP8.23□□□□□ -1.09
LIMD1-204ENST00000474665 NUP88Q99567 741 aaPredicted RBP8.23□□□□□ -1.09
LIMD1-204ENST00000474665 TMEM47Q9BQJ4 181 aa8.23□□□□□ -1.09
LIMD1-204ENST00000474665 LRRC2Q9BYS8 371 aa8.23□□□□□ -1.09
LIMD1-204ENST00000474665 TBC1D2Q9BYX2 928 aa8.23□□□□□ -1.09
LIMD1-204ENST00000474665 VCPKMTQ9H867 229 aa8.23□□□□□ -1.09
LIMD1-204ENST00000474665 CNNM2Q9H8M5 875 aa8.23□□□□□ -1.09
LIMD1-204ENST00000474665 CPA4Q9UI42 421 aa8.23□□□□□ -1.09
LIMD1-204ENST00000474665 ARIH1Q9Y4X5 557 aaPredicted RBP8.23□□□□□ -1.09
LIMD1-204ENST00000474665 ADGRA2Q96PE1 1338 aa8.23□□□□□ -1.09
LIMD1-204ENST00000474665 COL11A1P12107 1806 aaPredicted RBP8.22□□□□□ -1.09
LIMD1-204ENST00000474665 F5H6K3 240 aa8.22□□□□□ -1.09
LIMD1-204ENST00000474665 PEX10O60683 326 aa8.22□□□□□ -1.09
LIMD1-204ENST00000474665 HOXA7P31268 230 aaPredicted RBP8.22□□□□□ -1.09
LIMD1-204ENST00000474665 ATP2B2Q01814 1243 aa8.22□□□□□ -1.09
LIMD1-204ENST00000474665 PRKCZQ05513 592 aa8.22□□□□□ -1.09
LIMD1-204ENST00000474665 KLRC3Q07444 240 aa8.22□□□□□ -1.09
LIMD1-204ENST00000474665 RNF20Q5VTR2 975 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms