RNA–Protein interactions for RNA: ENST00000469762.5

SMC4-210, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 3,998 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-210ENST00000469762 CCDC196A0A1B0GTZ2 297 aa11.63□□□□□ -0.55
SMC4-210ENST00000469762 PRPF6O94906 941 aaKnown RBP11.63□□□□□ -0.55
SMC4-210ENST00000469762 GPS2Q13227 327 aa11.63□□□□□ -0.55
SMC4-210ENST00000469762 MAPK8IP2Q13387 824 aaPredicted RBP11.63□□□□□ -0.55
SMC4-210ENST00000469762 TUBB2AQ13885 445 aa11.63□□□□□ -0.55
SMC4-210ENST00000469762 WHAMMP3Q1A5X7 153 aa11.63□□□□□ -0.55
SMC4-210ENST00000469762 TMTC2Q8N394 836 aa11.63□□□□□ -0.55
SMC4-210ENST00000469762 LRRC15Q8TF66 581 aa11.63□□□□□ -0.55
SMC4-210ENST00000469762 FERMT2Q96AC1 680 aa11.63□□□□□ -0.55
SMC4-210ENST00000469762 TUBB2BQ9BVA1 445 aa11.63□□□□□ -0.55
SMC4-210ENST00000469762 RWDD2AQ9UIY3 292 aa11.63□□□□□ -0.55
SMC4-210ENST00000469762 MYO6Q9UM54 1294 aa11.63□□□□□ -0.55
SMC4-210ENST00000469762 RCCD1A6NED2 376 aa11.63□□□□□ -0.55
SMC4-210ENST00000469762 C4orf32Q8N8J7 132 aa11.63□□□□□ -0.55
SMC4-210ENST00000469762 ZFP91Q96JP5 570 aaPredicted RBP11.63□□□□□ -0.55
SMC4-210ENST00000469762 TTC26A0AVF1 554 aa11.62□□□□□ -0.55
SMC4-210ENST00000469762 ENC1O14682 589 aa11.62□□□□□ -0.55
SMC4-210ENST00000469762 LRRC31Q6UY01 552 aa11.62□□□□□ -0.55
SMC4-210ENST00000469762 ZNF507Q8TCN5 953 aa11.62□□□□□ -0.55
SMC4-210ENST00000469762 MMS19Q96T76 1030 aa11.62□□□□□ -0.55
SMC4-210ENST00000469762 RIOK1Q9BRS2 568 aaKnown RBP11.62□□□□□ -0.55
SMC4-210ENST00000469762 MAPK8IP1Q9UQF2 711 aa11.62□□□□□ -0.55
SMC4-210ENST00000469762 SOS2Q07890 1332 aaPredicted RBP11.62□□□□□ -0.55
SMC4-210ENST00000469762 TRIM49BA6NDI0 452 aa11.62□□□□□ -0.55
SMC4-210ENST00000469762 N4BP3O15049 544 aa11.62□□□□□ -0.55
SMC4-210ENST00000469762 NKRFO15226 690 aaKnown RBP eCLIP11.62□□□□□ -0.55
SMC4-210ENST00000469762 SRGAP2O75044 1071 aa11.62□□□□□ -0.55
SMC4-210ENST00000469762 KRT9P35527 623 aa11.62□□□□□ -0.55
SMC4-210ENST00000469762 PRCPP42785 496 aa11.62□□□□□ -0.55
SMC4-210ENST00000469762 SART3Q15020 963 aaKnown RBP11.62□□□□□ -0.55
SMC4-210ENST00000469762 CYP26C1Q6V0L0 522 aa11.62□□□□□ -0.55
SMC4-210ENST00000469762 SRBD1Q8N5C6 995 aaKnown RBP11.62□□□□□ -0.55
SMC4-210ENST00000469762 AK7Q96M32 723 aa11.62□□□□□ -0.55
SMC4-210ENST00000469762 RRP15Q9Y3B9 282 aaKnown RBP11.62□□□□□ -0.55
SMC4-210ENST00000469762 CNTNAP5Q8WYK1 1306 aa11.62□□□□□ -0.55
SMC4-210ENST00000469762 PHLPP1O60346 1717 aa11.62□□□□□ -0.55
SMC4-210ENST00000469762 TAF1P21675 1872 aa11.62□□□□□ -0.55
SMC4-210ENST00000469762 CTAGE15A4D2H0 777 aa11.62□□□□□ -0.55
SMC4-210ENST00000469762 KCNJ18B7U540 433 aa11.62□□□□□ -0.55
SMC4-210ENST00000469762 POTEB2H3BUK9 544 aa11.62□□□□□ -0.55
SMC4-210ENST00000469762 PHACTR2O75167 634 aa11.62□□□□□ -0.55
SMC4-210ENST00000469762 NDUFA10O95299 355 aa11.62□□□□□ -0.55
SMC4-210ENST00000469762 ATP1A1P05023 1023 aaKnown RBP11.62□□□□□ -0.55
SMC4-210ENST00000469762 CTAGE8P0CG41 777 aa11.62□□□□□ -0.55
SMC4-210ENST00000469762 GNAT2P19087 354 aa11.62□□□□□ -0.55
SMC4-210ENST00000469762 KCNJ12Q14500 433 aa11.62□□□□□ -0.55
SMC4-210ENST00000469762 TTC38Q5R3I4 469 aa11.62□□□□□ -0.55
SMC4-210ENST00000469762 CTAGE6Q86UF2 777 aa11.62□□□□□ -0.55
SMC4-210ENST00000469762 CTAGE4Q8IX94 777 aa11.62□□□□□ -0.55
SMC4-210ENST00000469762 MYO1AQ9UBC5 1043 aa11.62□□□□□ -0.55
SMC4-210ENST00000469762 MYBL2P10244 700 aa11.61□□□□□ -0.55
SMC4-210ENST00000469762 NAALADL2Q58DX5 795 aa11.61□□□□□ -0.55
SMC4-210ENST00000469762 SUSD4Q5VX71 490 aa11.61□□□□□ -0.55
SMC4-210ENST00000469762 RRAGBQ5VZM2 374 aa11.61□□□□□ -0.55
SMC4-210ENST00000469762 BRINP3Q76B58 766 aa11.61□□□□□ -0.55
SMC4-210ENST00000469762 C10orf67Q8IYJ2 551 aa11.61□□□□□ -0.55
SMC4-210ENST00000469762 ZSCAN10Q96SZ4 725 aaPredicted RBP11.61□□□□□ -0.55
SMC4-210ENST00000469762 MINDY4BA8MYZ0 360 aa11.61□□□□□ -0.55
SMC4-210ENST00000469762 PSMD14O00487 310 aa11.61□□□□□ -0.55
SMC4-210ENST00000469762 STARD3NLO95772 234 aa11.61□□□□□ -0.55
SMC4-210ENST00000469762 FGRP09769 529 aa11.61□□□□□ -0.55
SMC4-210ENST00000469762 SLC5A1P13866 664 aa11.61□□□□□ -0.55
SMC4-210ENST00000469762 NELFBQ8WX92 580 aa11.61□□□□□ -0.55
SMC4-210ENST00000469762 EPN1Q9Y6I3 576 aaPredicted RBP11.61□□□□□ -0.55
SMC4-210ENST00000469762 ERICH2A1L162 156 aa11.61□□□□□ -0.55
SMC4-210ENST00000469762 FILIP1LQ4L180 1135 aa11.61□□□□□ -0.55
SMC4-210ENST00000469762 DNAJC7Q99615 494 aa11.61□□□□□ -0.55
SMC4-210ENST00000469762 UBAC1Q9BSL1 405 aa11.61□□□□□ -0.55
SMC4-210ENST00000469762 IQSEC3Q9UPP2 1182 aaPredicted RBP11.61□□□□□ -0.55
SMC4-210ENST00000469762 PDE2AO00408 941 aaPredicted RBP11.6□□□□□ -0.55
SMC4-210ENST00000469762 NMT2O60551 498 aa11.6□□□□□ -0.55
SMC4-210ENST00000469762 AARSP49588 968 aaKnown RBP eCLIP11.6□□□□□ -0.553e-49■■■■■ 252.4
SMC4-210ENST00000469762 USP14P54578 494 aa11.6□□□□□ -0.55
SMC4-210ENST00000469762 PAK1Q13153 545 aa11.6□□□□□ -0.55
SMC4-210ENST00000469762 ZNF658Q5TYW1 1059 aaPredicted RBP11.6□□□□□ -0.55
SMC4-210ENST00000469762 NUP88Q99567 741 aaPredicted RBP11.6□□□□□ -0.55
SMC4-210ENST00000469762 NACAP1Q9BZK3 213 aa11.6□□□□□ -0.55
SMC4-210ENST00000469762 TTYH3Q9C0H2 523 aa11.6□□□□□ -0.55
SMC4-210ENST00000469762 AGPSO00116 658 aa11.6□□□□□ -0.55
SMC4-210ENST00000469762 TMTC3Q6ZXV5 915 aa11.6□□□□□ -0.55
SMC4-210ENST00000469762 RIN2Q8WYP3 895 aaPredicted RBP11.6□□□□□ -0.55
SMC4-210ENST00000469762 LACRTQ9GZZ8 138 aa11.6□□□□□ -0.55
SMC4-210ENST00000469762 GUCA1BQ9UMX6 200 aa11.6□□□□□ -0.55
SMC4-210ENST00000469762 BCL9O00512 1426 aa11.6□□□□□ -0.55
SMC4-210ENST00000469762 GTPBP6O43824 516 aaPredicted RBP11.6□□□□□ -0.55
SMC4-210ENST00000469762 PIP4K2BP78356 416 aa11.6□□□□□ -0.55
SMC4-210ENST00000469762 PAPD7Q5XG87 772 aaKnown RBP11.6□□□□□ -0.55
SMC4-210ENST00000469762 FAM71BQ8TC56 605 aa11.6□□□□□ -0.55
SMC4-210ENST00000469762 FAM205AQ6ZU69 1335 aa11.6□□□□□ -0.55
SMC4-210ENST00000469762 KLRC4O43908 158 aa11.6□□□□□ -0.55
SMC4-210ENST00000469762 PARP1P09874 1014 aaKnown RBP11.6□□□□□ -0.55
SMC4-210ENST00000469762 DYNLL1P63167 89 aaKnown RBP11.6□□□□□ -0.55
SMC4-210ENST00000469762 DUSP10Q9Y6W6 482 aa11.6□□□□□ -0.55
SMC4-210ENST00000469762 RTL9Q8NET4 1388 aa11.59□□□□□ -0.55
SMC4-210ENST00000469762 RREB1Q92766 1687 aa11.59□□□□□ -0.55
SMC4-210ENST00000469762 ERLIN1O75477 346 aa11.59□□□□□ -0.55
SMC4-210ENST00000469762 RPN1P04843 607 aaKnown RBP11.59□□□□□ -0.55
SMC4-210ENST00000469762 CYP7A1P22680 504 aa11.59□□□□□ -0.55
SMC4-210ENST00000469762 ADSSL1Q8N142 457 aa11.59□□□□□ -0.55
SMC4-210ENST00000469762 MB21D1Q8N884 522 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms