RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 ADGRE1Q14246 886 aa7.22□□□□□ -1.25
VPS36-202ENST00000462289 PCSK7Q16549 785 aa7.22□□□□□ -1.25
VPS36-202ENST00000462289 CCDC152Q4G0S7 254 aa7.22□□□□□ -1.25
VPS36-202ENST00000462289 PSAPL1Q6NUJ1 521 aa7.22□□□□□ -1.25
VPS36-202ENST00000462289 SLC51AQ86UW1 340 aa7.22□□□□□ -1.25
VPS36-202ENST00000462289 CELF1Q92879 486 aaKnown RBP7.22□□□□□ -1.25
VPS36-202ENST00000462289 RBM17Q96I25 401 aaKnown RBP7.22□□□□□ -1.25
VPS36-202ENST00000462289 SUCLG2Q96I99 432 aa7.22□□□□□ -1.25
VPS36-202ENST00000462289 VPS33BQ9H267 617 aa7.22□□□□□ -1.25
VPS36-202ENST00000462289 KLK14Q9P0G3 267 aa7.22□□□□□ -1.25
VPS36-202ENST00000462289 SCN4AP35499 1836 aa7.22□□□□□ -1.25
VPS36-202ENST00000462289 ADAMTSL1Q8N6G6 1762 aa7.21□□□□□ -1.25
VPS36-202ENST00000462289 FAM177BA6PVY3 158 aa7.21□□□□□ -1.26
VPS36-202ENST00000462289 ARSDP51689 593 aa7.21□□□□□ -1.26
VPS36-202ENST00000462289 RPS8P62241 208 aaKnown RBP7.21□□□□□ -1.26
VPS36-202ENST00000462289 TBC1D8BQ0IIM8 1120 aa7.21□□□□□ -1.26
VPS36-202ENST00000462289 DZIP1LQ8IYY4 767 aaKnown RBP7.21□□□□□ -1.26
VPS36-202ENST00000462289 TMEM57Q8N5G2 664 aa7.21□□□□□ -1.26
VPS36-202ENST00000462289 VGLL2Q8N8G2 317 aa7.21□□□□□ -1.26
VPS36-202ENST00000462289 TRPM4Q8TD43 1214 aa7.21□□□□□ -1.26
VPS36-202ENST00000462289 NUDT8Q8WV74 236 aa7.21□□□□□ -1.26
VPS36-202ENST00000462289 LENG1Q96BZ8 264 aaPredicted RBP7.21□□□□□ -1.26
VPS36-202ENST00000462289 MEIS3Q99687 375 aa7.21□□□□□ -1.26
VPS36-202ENST00000462289 GREM2Q9H772 168 aa7.21□□□□□ -1.26
VPS36-202ENST00000462289 SEC31BQ9NQW1 1179 aa7.21□□□□□ -1.26
VPS36-202ENST00000462289 BSDC1Q9NW68 430 aaPredicted RBP7.21□□□□□ -1.26
VPS36-202ENST00000462289 FRRS1LQ9P0K9 344 aa7.21□□□□□ -1.26
VPS36-202ENST00000462289 DYRK3O43781 588 aa7.2□□□□□ -1.26
VPS36-202ENST00000462289 FKBP4Q02790 459 aaKnown RBP eCLIP7.2□□□□□ -1.26
VPS36-202ENST00000462289 DGKZQ13574 1117 aa7.2□□□□□ -1.26
VPS36-202ENST00000462289 MBTPS1Q14703 1052 aa7.2□□□□□ -1.26
VPS36-202ENST00000462289 GRIK5Q16478 980 aa7.2□□□□□ -1.26
VPS36-202ENST00000462289 C11orf91Q3C1V1 193 aa7.2□□□□□ -1.26
VPS36-202ENST00000462289 CCDC93Q567U6 631 aa7.2□□□□□ -1.26
VPS36-202ENST00000462289 SLC4A10Q6U841 1118 aa7.2□□□□□ -1.26
VPS36-202ENST00000462289 OLFM4Q6UX06 510 aa7.2□□□□□ -1.26
VPS36-202ENST00000462289 C15orf52Q6ZUT6 534 aaKnown RBP7.2□□□□□ -1.26
VPS36-202ENST00000462289 DDX46Q7L014 1031 aaKnown RBP7.2□□□□□ -1.26
VPS36-202ENST00000462289 RTKN2Q8IZC4 609 aa7.2□□□□□ -1.26
VPS36-202ENST00000462289 JARID2Q92833 1246 aaPredicted RBP7.2□□□□□ -1.26
VPS36-202ENST00000462289 RPGRQ92834 1020 aaKnown RBP7.2□□□□□ -1.26
VPS36-202ENST00000462289 ZNF622Q969S3 477 aaKnown RBP eCLIP7.2□□□□□ -1.269e-6■■□□□ 12.8
VPS36-202ENST00000462289 IGFLR1Q9H665 355 aa7.2□□□□□ -1.26
VPS36-202ENST00000462289 BICC1Q9H694 974 aaKnown RBP7.2□□□□□ -1.26
VPS36-202ENST00000462289 ZBTB40Q9NUA8 1239 aa7.2□□□□□ -1.26
VPS36-202ENST00000462289 ZFATQ9P243 1243 aa7.2□□□□□ -1.26
VPS36-202ENST00000462289 RIPOR2Q9Y4F9 1068 aa7.2□□□□□ -1.26
VPS36-202ENST00000462289 AKAP11Q9UKA4 1901 aa7.19□□□□□ -1.26
VPS36-202ENST00000462289 MYH13Q9UKX3 1938 aa7.19□□□□□ -1.26
VPS36-202ENST00000462289 MICAL2O94851 1124 aa7.19□□□□□ -1.26
VPS36-202ENST00000462289 GNAI3P08754 354 aa7.19□□□□□ -1.26
VPS36-202ENST00000462289 LMNB1P20700 586 aa7.19□□□□□ -1.26
VPS36-202ENST00000462289 RAC1P63000 192 aa7.19□□□□□ -1.26
VPS36-202ENST00000462289 NRG1Q02297 640 aaPredicted RBP7.19□□□□□ -1.26
VPS36-202ENST00000462289 PTPN12Q05209 780 aaKnown RBP7.19□□□□□ -1.26
VPS36-202ENST00000462289 MVPQ14764 893 aaKnown RBP7.19□□□□□ -1.26
VPS36-202ENST00000462289 GPR162Q16538 588 aa7.19□□□□□ -1.26
VPS36-202ENST00000462289 LMBR1LQ6UX01 489 aa7.19□□□□□ -1.26
VPS36-202ENST00000462289 DHX32Q7L7V1 743 aaKnown RBP7.19□□□□□ -1.26
VPS36-202ENST00000462289 FMR1NBQ8N0W7 255 aaPredicted RBP7.19□□□□□ -1.26
VPS36-202ENST00000462289 FAM200AQ8TCP9 573 aa7.19□□□□□ -1.26
VPS36-202ENST00000462289 TTC9Q92623 222 aa7.19□□□□□ -1.26
VPS36-202ENST00000462289 CDC5LQ99459 802 aaKnown RBP7.19□□□□□ -1.26
VPS36-202ENST00000462289 LPIN3Q9BQK8 851 aa7.19□□□□□ -1.26
VPS36-202ENST00000462289 COPRSQ9NQ92 184 aa7.19□□□□□ -1.26
VPS36-202ENST00000462289 C9orf78Q9NZ63 289 aaPredicted RBP7.19□□□□□ -1.26
VPS36-202ENST00000462289 LRFN2Q9ULH4 789 aa7.19□□□□□ -1.26
VPS36-202ENST00000462289 MINPP1Q9UNW1 487 aa7.19□□□□□ -1.26
VPS36-202ENST00000462289 ZBTB42B2RXF5 422 aa7.18□□□□□ -1.26
VPS36-202ENST00000462289 FZD9O00144 591 aa7.18□□□□□ -1.26
VPS36-202ENST00000462289 RGS9O75916 674 aaPredicted RBP7.18□□□□□ -1.26
VPS36-202ENST00000462289 CIAO1O76071 339 aa7.18□□□□□ -1.26
VPS36-202ENST00000462289 EGFRP00533 1210 aa7.18□□□□□ -1.26
VPS36-202ENST00000462289 UBTFL1P0CB47 393 aaPredicted RBP7.18□□□□□ -1.26
VPS36-202ENST00000462289 GPLD1P80108 840 aa7.18□□□□□ -1.26
VPS36-202ENST00000462289 KIAA2012Q0VF49 1180 aa7.18□□□□□ -1.26
VPS36-202ENST00000462289 C20orf194Q5TEA3 1177 aa7.18□□□□□ -1.26
VPS36-202ENST00000462289 ATG9AQ7Z3C6 839 aa7.18□□□□□ -1.26
VPS36-202ENST00000462289 FAM35AQ86V20 835 aa7.18□□□□□ -1.26
VPS36-202ENST00000462289 TXNRD3Q86VQ6 643 aa7.18□□□□□ -1.26
VPS36-202ENST00000462289 DTWD1Q8N5C7 304 aa7.18□□□□□ -1.26
VPS36-202ENST00000462289 SSH3Q8TE77 659 aa7.18□□□□□ -1.26
VPS36-202ENST00000462289 IFT43Q96FT9 208 aa7.18□□□□□ -1.26
VPS36-202ENST00000462289 TAOK3Q9H2K8 898 aa7.18□□□□□ -1.26
VPS36-202ENST00000462289 POLLQ9UGP5 575 aa7.18□□□□□ -1.26
VPS36-202ENST00000462289 HDAC5Q9UQL6 1122 aa7.18□□□□□ -1.26
VPS36-202ENST00000462289 XDHP47989 1333 aa7.18□□□□□ -1.26
VPS36-202ENST00000462289 MED23Q9ULK4 1368 aa7.18□□□□□ -1.26
VPS36-202ENST00000462289 OPLAHO14841 1288 aa7.17□□□□□ -1.26
VPS36-202ENST00000462289 NPHP1O15259 732 aa7.17□□□□□ -1.26
VPS36-202ENST00000462289 FGFR2P21802 821 aa7.17□□□□□ -1.26
VPS36-202ENST00000462289 TARSP26639 723 aaKnown RBP7.17□□□□□ -1.26
VPS36-202ENST00000462289 RRP1P56182 461 aaKnown RBP7.17□□□□□ -1.26
VPS36-202ENST00000462289 IFIT5Q13325 482 aaKnown RBP7.17□□□□□ -1.26
VPS36-202ENST00000462289 SWI5Q1ZZU3 235 aa7.17□□□□□ -1.26
VPS36-202ENST00000462289 FOXD4L6Q3SYB3 417 aaPredicted RBP7.17□□□□□ -1.26
VPS36-202ENST00000462289 ZMYM1Q5SVZ6 1142 aa7.17□□□□□ -1.26
VPS36-202ENST00000462289 FOXD4L3Q6VB84 417 aaPredicted RBP7.17□□□□□ -1.26
VPS36-202ENST00000462289 ANKRD18AQ8IVF6 992 aa7.17□□□□□ -1.26
VPS36-202ENST00000462289 TBC1D16Q8TBP0 767 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms