RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 TMC3Q7Z5M5 1100 aa5.65□□□□□ -1.51
CLK1-204ENST00000432425 GPRASP2Q96D09 838 aa5.65□□□□□ -1.51
CLK1-204ENST00000432425 CRBNQ96SW2 442 aa5.65□□□□□ -1.51
CLK1-204ENST00000432425 HDAC8Q9BY41 377 aa5.65□□□□□ -1.51
CLK1-204ENST00000432425 GOLGA2P5Q9HBQ8 144 aa5.65□□□□□ -1.51
CLK1-204ENST00000432425 GINM1Q9NU53 330 aa5.65□□□□□ -1.51
CLK1-204ENST00000432425 FBXL21Q9UKT6 434 aa5.65□□□□□ -1.51
CLK1-204ENST00000432425 SNW1Q13573 536 aaKnown RBP5.64□□□□□ -1.51
CLK1-204ENST00000432425 OXR1Q8N573 874 aa5.64□□□□□ -1.51
CLK1-204ENST00000432425 TAB3Q8N5C8 712 aaPredicted RBP5.64□□□□□ -1.51
CLK1-204ENST00000432425 POU5F2Q8N7G0 328 aa5.64□□□□□ -1.51
CLK1-204ENST00000432425 DAGLBQ8NCG7 672 aa5.64□□□□□ -1.51
CLK1-204ENST00000432425 ABHD4Q8TB40 342 aa5.64□□□□□ -1.51
CLK1-204ENST00000432425 MYLIPQ8WY64 445 aa5.64□□□□□ -1.51
CLK1-204ENST00000432425 EFR3BQ9Y2G0 817 aa5.64□□□□□ -1.51
CLK1-204ENST00000432425 PCDHB12Q9Y5F1 795 aa5.64□□□□□ -1.51
CLK1-204ENST00000432425 LRRC10BA6NIK2 292 aa5.63□□□□□ -1.51
CLK1-204ENST00000432425 PRAMEF1O95521 474 aa5.63□□□□□ -1.51
CLK1-204ENST00000432425 ACRP10323 421 aa5.63□□□□□ -1.51
CLK1-204ENST00000432425 PCBP3P57721 371 aaKnown RBP5.63□□□□□ -1.51
CLK1-204ENST00000432425 TEKQ02763 1124 aa5.63□□□□□ -1.51
CLK1-204ENST00000432425 DUSP4Q13115 394 aa5.63□□□□□ -1.51
CLK1-204ENST00000432425 CCDC81Q6ZN84 652 aa5.63□□□□□ -1.51
CLK1-204ENST00000432425 RNF111Q6ZNA4 994 aa5.63□□□□□ -1.51
CLK1-204ENST00000432425 ZNF655Q8N720 491 aaPredicted RBP5.63□□□□□ -1.51
CLK1-204ENST00000432425 RBBP8NLQ8NC74 664 aaPredicted RBP5.63□□□□□ -1.51
CLK1-204ENST00000432425 PDZD8Q8NEN9 1154 aa5.63□□□□□ -1.51
CLK1-204ENST00000432425 TCTN2Q96GX1 697 aa5.63□□□□□ -1.51
CLK1-204ENST00000432425 PRDM14Q9GZV8 571 aa5.63□□□□□ -1.51
CLK1-204ENST00000432425 SUCOQ9UBS9 1254 aaKnown RBP5.63□□□□□ -1.51
CLK1-204ENST00000432425 ZNF503-AS2A6NEH8 195 aa5.63□□□□□ -1.51
CLK1-204ENST00000432425 SIGLEC6O43699 453 aa5.63□□□□□ -1.51
CLK1-204ENST00000432425 FARP2O94887 1054 aaPredicted RBP5.63□□□□□ -1.51
CLK1-204ENST00000432425 HPXP02790 462 aa5.63□□□□□ -1.51
CLK1-204ENST00000432425 ZGLP1P0C6A0 271 aa5.63□□□□□ -1.51
CLK1-204ENST00000432425 GUCY2CP25092 1073 aa5.63□□□□□ -1.51
CLK1-204ENST00000432425 RPL10P27635 214 aaKnown RBP5.63□□□□□ -1.51
CLK1-204ENST00000432425 ERVFC1P60507 584 aa5.63□□□□□ -1.51
CLK1-204ENST00000432425 MLANAQ16655 118 aa5.63□□□□□ -1.51
CLK1-204ENST00000432425 LSRQ86X29 649 aaPredicted RBP5.63□□□□□ -1.51
CLK1-204ENST00000432425 CCDC144CPQ8IYA2 1237 aa5.63□□□□□ -1.51
CLK1-204ENST00000432425 RASGRP4Q8TDF6 673 aa5.63□□□□□ -1.51
CLK1-204ENST00000432425 SMARCC1Q92922 1105 aaPredicted RBP5.63□□□□□ -1.51
CLK1-204ENST00000432425 LIN37Q96GY3 246 aaPredicted RBP5.63□□□□□ -1.51
CLK1-204ENST00000432425 FOXP3Q9BZS1 431 aa5.63□□□□□ -1.51
CLK1-204ENST00000432425 TGIF2Q9GZN2 237 aa5.63□□□□□ -1.51
CLK1-204ENST00000432425 CCSER2Q9H7U1 834 aa5.63□□□□□ -1.51
CLK1-204ENST00000432425 CHST7Q9NS84 486 aa5.63□□□□□ -1.51
CLK1-204ENST00000432425 FITM1A5D6W6 292 aa5.62□□□□□ -1.51
CLK1-204ENST00000432425 YBX3P16989 372 aaKnown RBP eCLIP5.62□□□□□ -1.51
CLK1-204ENST00000432425 SOX9P48436 509 aa5.62□□□□□ -1.51
CLK1-204ENST00000432425 PMS1P54277 932 aaKnown RBP5.62□□□□□ -1.51
CLK1-204ENST00000432425 EIF6P56537 245 aaKnown RBP5.62□□□□□ -1.51
CLK1-204ENST00000432425 CHRNEQ04844 493 aa5.62□□□□□ -1.51
CLK1-204ENST00000432425 AUHQ13825 339 aaKnown RBP5.62□□□□□ -1.51
CLK1-204ENST00000432425 WAPLQ7Z5K2 1190 aa5.62□□□□□ -1.51
CLK1-204ENST00000432425 SPPL2CQ8IUH8 684 aa5.62□□□□□ -1.51
CLK1-204ENST00000432425 USHBP1Q8N6Y0 703 aa5.62□□□□□ -1.51
CLK1-204ENST00000432425 GFOD1Q9NXC2 390 aa5.62□□□□□ -1.51
CLK1-204ENST00000432425 ZMYM5Q9UJ78 669 aa5.62□□□□□ -1.51
CLK1-204ENST00000432425 TCFL5Q9UL49 500 aa5.62□□□□□ -1.51
CLK1-204ENST00000432425 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.61□□□□□ -1.51
CLK1-204ENST00000432425 MEIS1O00470 390 aa5.61□□□□□ -1.51
CLK1-204ENST00000432425 SYPP08247 313 aa5.61□□□□□ -1.51
CLK1-204ENST00000432425 TDRD10Q5VZ19 366 aaKnown RBP5.61□□□□□ -1.51
CLK1-204ENST00000432425 UNC5AQ6ZN44 842 aa5.61□□□□□ -1.51
CLK1-204ENST00000432425 RUFY4Q6ZNE9 571 aa5.61□□□□□ -1.51
CLK1-204ENST00000432425 C7orf61Q8IZ16 206 aa5.61□□□□□ -1.51
CLK1-204ENST00000432425 LILRA2Q8N149 483 aa5.61□□□□□ -1.51
CLK1-204ENST00000432425 ANKS4BQ8N8V4 417 aa5.61□□□□□ -1.51
CLK1-204ENST00000432425 SLC38A3Q99624 504 aa5.61□□□□□ -1.51
CLK1-204ENST00000432425 SRRTQ9BXP5 876 aaKnown RBP5.61□□□□□ -1.51
CLK1-204ENST00000432425 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.61□□□□□ -1.51
CLK1-204ENST00000432425 INPP5FQ9Y2H2 1132 aa5.61□□□□□ -1.51
CLK1-204ENST00000432425 C9IYK1 514 aa5.6□□□□□ -1.51
CLK1-204ENST00000432425 FKTNO75072 461 aa5.6□□□□□ -1.51
CLK1-204ENST00000432425 GJA8P48165 433 aa5.6□□□□□ -1.51
CLK1-204ENST00000432425 BBS9Q3SYG4 887 aa5.6□□□□□ -1.51
CLK1-204ENST00000432425 ZNF648Q5T619 568 aaPredicted RBP5.6□□□□□ -1.51
CLK1-204ENST00000432425 KSR1Q8IVT5 923 aa5.6□□□□□ -1.51
CLK1-204ENST00000432425 LINC00116Q8NCU8 138 aa5.6□□□□□ -1.51
CLK1-204ENST00000432425 OR6P1Q8NGX9 317 aa5.6□□□□□ -1.51
CLK1-204ENST00000432425 CPLX3Q8WVH0 158 aa5.6□□□□□ -1.51
CLK1-204ENST00000432425 DSCC1Q9BVC3 393 aa5.6□□□□□ -1.51
CLK1-204ENST00000432425 ACBD3Q9H3P7 528 aa5.6□□□□□ -1.51
CLK1-204ENST00000432425 PRR13Q9NZ81 148 aa5.6□□□□□ -1.51
CLK1-204ENST00000432425 SLC12A7Q9Y666 1083 aa5.6□□□□□ -1.51
CLK1-204ENST00000432425 ENDOUP21128 410 aaKnown RBP5.59□□□□□ -1.51
CLK1-204ENST00000432425 TRHRP34981 398 aaPredicted RBP5.59□□□□□ -1.51
CLK1-204ENST00000432425 NASPP49321 788 aaPredicted RBP5.59□□□□□ -1.51
CLK1-204ENST00000432425 FAM84AQ96KN4 292 aa5.59□□□□□ -1.51
CLK1-204ENST00000432425 KRTAP4-5Q9BYR2 181 aa5.59□□□□□ -1.51
CLK1-204ENST00000432425 C19orf44Q9H6X5 657 aa5.59□□□□□ -1.51
CLK1-204ENST00000432425 MINPP1Q9UNW1 487 aa5.59□□□□□ -1.51
CLK1-204ENST00000432425 TP53P04637 393 aaPredicted RBP5.59□□□□□ -1.52
CLK1-204ENST00000432425 C8AP07357 584 aa5.59□□□□□ -1.52
CLK1-204ENST00000432425 NR0B2Q15466 257 aa5.59□□□□□ -1.52
CLK1-204ENST00000432425 ZYXQ15942 572 aaKnown RBP5.59□□□□□ -1.52
CLK1-204ENST00000432425 PKN1Q16512 942 aa5.59□□□□□ -1.52
CLK1-204ENST00000432425 PRR23BQ6ZRT6 265 aa5.59□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms