RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 FOSL1P15407 271 aa9.56□□□□□ -0.88
PTPN12-202ENST00000407343 ZNF445P59923 1031 aa9.56□□□□□ -0.88
PTPN12-202ENST00000407343 EEPD1Q7L9B9 569 aa9.56□□□□□ -0.88
PTPN12-202ENST00000407343 NOP9Q86U38 636 aaKnown RBP9.56□□□□□ -0.88
PTPN12-202ENST00000407343 PLD6Q8N2A8 252 aaKnown RBP9.56□□□□□ -0.88
PTPN12-202ENST00000407343 GPR62Q9BZJ7 368 aa9.56□□□□□ -0.88
PTPN12-202ENST00000407343 SEMA6BQ9H3T3 888 aa9.56□□□□□ -0.88
PTPN12-202ENST00000407343 ZC3H7BQ9UGR2 993 aaKnown RBP9.56□□□□□ -0.88
PTPN12-202ENST00000407343 ZMYM5Q9UJ78 669 aa9.56□□□□□ -0.88
PTPN12-202ENST00000407343 MSMPQ1L6U9 139 aa9.55□□□□□ -0.88
PTPN12-202ENST00000407343 HEATR6Q6AI08 1181 aaKnown RBP9.55□□□□□ -0.88
PTPN12-202ENST00000407343 JAZF1Q86VZ6 243 aa9.55□□□□□ -0.88
PTPN12-202ENST00000407343 LILRB2Q8N423 598 aa9.55□□□□□ -0.88
PTPN12-202ENST00000407343 JMYQ8N9B5 988 aa9.55□□□□□ -0.88
PTPN12-202ENST00000407343 ZNF669Q96BR6 464 aaPredicted RBP9.55□□□□□ -0.88
PTPN12-202ENST00000407343 FGD4Q96M96 766 aa9.55□□□□□ -0.88
PTPN12-202ENST00000407343 DNAJC7Q99615 494 aa9.55□□□□□ -0.88
PTPN12-202ENST00000407343 LRRC4CQ9HCJ2 640 aa9.55□□□□□ -0.88
PTPN12-202ENST00000407343 PRR13Q9NZ81 148 aa9.55□□□□□ -0.88
PTPN12-202ENST00000407343 MINPP1Q9UNW1 487 aa9.55□□□□□ -0.88
PTPN12-202ENST00000407343 LEMD3Q9Y2U8 911 aa9.55□□□□□ -0.88
PTPN12-202ENST00000407343 TBX22Q9Y458 520 aa9.55□□□□□ -0.88
PTPN12-202ENST00000407343 PCDHB12Q9Y5F1 795 aa9.55□□□□□ -0.88
PTPN12-202ENST00000407343 DIAPH1O60610 1272 aaKnown RBP9.54□□□□□ -0.88
PTPN12-202ENST00000407343 ITIH2P19823 946 aa9.54□□□□□ -0.88
PTPN12-202ENST00000407343 LGR4Q9BXB1 951 aa9.54□□□□□ -0.88
PTPN12-202ENST00000407343 HDAC8Q9BY41 377 aa9.54□□□□□ -0.88
PTPN12-202ENST00000407343 SEMA3GQ9NS98 782 aa9.54□□□□□ -0.88
PTPN12-202ENST00000407343 GFOD1Q9NXC2 390 aa9.54□□□□□ -0.88
PTPN12-202ENST00000407343 WHRNQ9P202 907 aa9.54□□□□□ -0.88
PTPN12-202ENST00000407343 GNAT3A8MTJ3 354 aa9.53□□□□□ -0.88
PTPN12-202ENST00000407343 WASH4PA8MWX3 477 aa9.53□□□□□ -0.88
PTPN12-202ENST00000407343 CYP26A1O43174 497 aa9.53□□□□□ -0.88
PTPN12-202ENST00000407343 SIGLEC6O43699 453 aa9.53□□□□□ -0.88
PTPN12-202ENST00000407343 PRAMEF1O95521 474 aa9.53□□□□□ -0.88
PTPN12-202ENST00000407343 CHMP4BP1P59074 171 aa9.53□□□□□ -0.88
PTPN12-202ENST00000407343 MRFAP1L1Q96HT8 127 aa9.53□□□□□ -0.88
PTPN12-202ENST00000407343 EPN3Q9H201 632 aa9.53□□□□□ -0.88
PTPN12-202ENST00000407343 KANSL2Q9H9L4 492 aa9.53□□□□□ -0.88
PTPN12-202ENST00000407343 KCNH3Q9ULD8 1083 aa9.53□□□□□ -0.88
PTPN12-202ENST00000407343 FHOD1Q9Y613 1164 aa9.53□□□□□ -0.88
PTPN12-202ENST00000407343 A0A087WZG4 1122 aa9.52□□□□□ -0.89
PTPN12-202ENST00000407343 CTSKP43235 329 aa9.52□□□□□ -0.89
PTPN12-202ENST00000407343 NMIQ13287 307 aaPredicted RBP9.52□□□□□ -0.89
PTPN12-202ENST00000407343 WFDC3Q8IUB2 231 aa9.52□□□□□ -0.89
PTPN12-202ENST00000407343 NLGN1Q8N2Q7 840 aa9.52□□□□□ -0.89
PTPN12-202ENST00000407343 ARHGEF39Q8N4T4 335 aa9.52□□□□□ -0.89
PTPN12-202ENST00000407343 SYTL5Q8TDW5 730 aaPredicted RBP9.52□□□□□ -0.89
PTPN12-202ENST00000407343 RCC1LQ96I51 464 aaKnown RBP9.52□□□□□ -0.89
PTPN12-202ENST00000407343 TBX1O43435 398 aa9.51□□□□□ -0.89
PTPN12-202ENST00000407343 ADCY3O60266 1144 aa9.51□□□□□ -0.89
PTPN12-202ENST00000407343 CLCN7P51798 805 aa9.51□□□□□ -0.89
PTPN12-202ENST00000407343 GAB4Q2WGN9 574 aa9.51□□□□□ -0.89
PTPN12-202ENST00000407343 MTERF2Q49AM1 385 aa9.51□□□□□ -0.89
PTPN12-202ENST00000407343 NETO1Q8TDF5 533 aa9.51□□□□□ -0.89
PTPN12-202ENST00000407343 BRF1Q92994 677 aa9.51□□□□□ -0.89
PTPN12-202ENST00000407343 MRGPRX3Q96LB0 322 aa9.51□□□□□ -0.89
PTPN12-202ENST00000407343 RNPC3Q96LT9 517 aaKnown RBP9.51□□□□□ -0.89
PTPN12-202ENST00000407343 HSPA12BQ96MM6 686 aa9.51□□□□□ -0.89
PTPN12-202ENST00000407343 APBA2Q99767 749 aa9.51□□□□□ -0.89
PTPN12-202ENST00000407343 FBXL21Q9UKT6 434 aa9.51□□□□□ -0.89
PTPN12-202ENST00000407343 PITPNM2Q9BZ72 1349 aa9.51□□□□□ -0.89
PTPN12-202ENST00000407343 A0A1W2PQU0 124 aa9.5□□□□□ -0.89
PTPN12-202ENST00000407343 MED26O95402 600 aa9.5□□□□□ -0.89
PTPN12-202ENST00000407343 ITGA4P13612 1032 aa9.5□□□□□ -0.89
PTPN12-202ENST00000407343 TCEAL1Q15170 157 aa9.5□□□□□ -0.89
PTPN12-202ENST00000407343 IFI16Q16666 785 aaKnown RBP9.5□□□□□ -0.89
PTPN12-202ENST00000407343 CDKAL1Q5VV42 579 aa9.5□□□□□ -0.89
PTPN12-202ENST00000407343 ZNF227Q86WZ6 799 aa9.5□□□□□ -0.89
PTPN12-202ENST00000407343 ADCY4Q8NFM4 1077 aa9.5□□□□□ -0.89
PTPN12-202ENST00000407343 CGGBP1Q9UFW8 167 aaPredicted RBP9.5□□□□□ -0.89
PTPN12-202ENST00000407343 PFDN2Q9UHV9 154 aa9.5□□□□□ -0.89
PTPN12-202ENST00000407343 EMC9Q9Y3B6 208 aa9.5□□□□□ -0.89
PTPN12-202ENST00000407343 FAM155AB1AL88 458 aaPredicted RBP9.49□□□□□ -0.89
PTPN12-202ENST00000407343 ITGAVP06756 1048 aa9.49□□□□□ -0.89
PTPN12-202ENST00000407343 TSPYL5Q86VY4 417 aaPredicted RBP9.49□□□□□ -0.89
PTPN12-202ENST00000407343 FIBCD1Q8N539 461 aa9.49□□□□□ -0.89
PTPN12-202ENST00000407343 DAGLBQ8NCG7 672 aa9.49□□□□□ -0.89
PTPN12-202ENST00000407343 ENOX1Q8TC92 643 aaKnown RBP9.49□□□□□ -0.89
PTPN12-202ENST00000407343 GBP3Q9H0R5 595 aa9.49□□□□□ -0.89
PTPN12-202ENST00000407343 CHST7Q9NS84 486 aa9.49□□□□□ -0.89
PTPN12-202ENST00000407343 SNX11Q9Y5W9 270 aa9.49□□□□□ -0.89
PTPN12-202ENST00000407343 H3BS24 57 aa9.48□□□□□ -0.89
PTPN12-202ENST00000407343 NAT2P11245 290 aa9.48□□□□□ -0.89
PTPN12-202ENST00000407343 SV2CQ496J9 727 aa9.48□□□□□ -0.89
PTPN12-202ENST00000407343 THAP5Q7Z6K1 395 aa9.48□□□□□ -0.89
PTPN12-202ENST00000407343 SGSM3Q96HU1 749 aa9.48□□□□□ -0.89
PTPN12-202ENST00000407343 NOL6Q9H6R4 1146 aaKnown RBP9.48□□□□□ -0.89
PTPN12-202ENST00000407343 ARHGEF4Q9NR80 690 aa9.48□□□□□ -0.89
PTPN12-202ENST00000407343 RNF112Q9ULX5 631 aa9.48□□□□□ -0.89
PTPN12-202ENST00000407343 MRPL42Q9Y6G3 142 aaKnown RBP9.48□□□□□ -0.89
PTPN12-202ENST00000407343 TLDC2A0PJX2 215 aa9.47□□□□□ -0.89
PTPN12-202ENST00000407343 H0Y8X5 98 aa9.47□□□□□ -0.89
PTPN12-202ENST00000407343 PPM1BO75688 479 aa9.47□□□□□ -0.89
PTPN12-202ENST00000407343 CYP4F3Q08477 520 aa9.47□□□□□ -0.89
PTPN12-202ENST00000407343 SSRP1Q08945 709 aaKnown RBP9.47□□□□□ -0.89
PTPN12-202ENST00000407343 IFRD2Q12894 506 aaPredicted RBP9.47□□□□□ -0.89
PTPN12-202ENST00000407343 NFXL1Q6ZNB6 911 aa9.47□□□□□ -0.89
PTPN12-202ENST00000407343 TRIM59Q8IWR1 403 aa9.47□□□□□ -0.89
PTPN12-202ENST00000407343 BVESQ8NE79 360 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms