RNA–Protein interactions for RNA: ENST00000394939.3

GTF2IRD2B-201, Transcript of GTF2I repeat domain containing 2B, humanhuman

TSL 3

Gene GTF2IRD2B, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD2B-201ENST00000394939 CHMP4CQ96CF2 233 aa14.15□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 ZNF274Q96GC6 653 aaPredicted RBP14.15□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 CAPNS2Q96L46 248 aa14.15□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 GPHNQ9NQX3 736 aaPredicted RBP14.15□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 LIMCH1Q9UPQ0 1083 aa14.15□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 MTMR7Q9Y216 660 aa14.15□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 PTPRFP10586 1907 aa14.14□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 CCL15-CCL14A0A0B4J2E2 113 aa14.14□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 CCDC196A0A1B0GTZ2 297 aa14.14□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 GOLGA8BA8MQT2 603 aa14.14□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 PARP1P09874 1014 aaKnown RBP14.14□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 BMP3P12645 472 aa14.14□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 GNAQP50148 359 aa14.14□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 EVCP57679 992 aa14.14□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 CCL15Q16663 113 aa14.14□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 ASPRV1Q53RT3 343 aa14.14□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 GPATCH4Q5T3I0 446 aaKnown RBP14.14□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 CYP4F22Q6NT55 531 aa14.14□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 APOA5Q6Q788 366 aa14.14□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 MICU3Q86XE3 530 aa14.14□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 SPICE1Q8N0Z3 855 aa14.14□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 ZSCAN31Q96LW9 406 aaPredicted RBP14.14□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 SENP2Q9HC62 589 aa14.14□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 EMILIN3Q9NT22 766 aa14.14□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 FAM155AB1AL88 458 aaPredicted RBP14.13□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 PDHBP11177 359 aa14.13□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 VCAM1P19320 739 aa14.13□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 METAP2P50579 478 aaKnown RBP eCLIP14.13□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 TROAPQ12815 778 aa14.13□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 GRM4Q14833 912 aa14.13□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 TANGO6Q9C0B7 1094 aa14.13□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 RBM28Q9NW13 759 aaKnown RBP14.13□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 PNMA3Q9UL41 463 aa14.13□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 AGTPBP1Q9UPW5 1226 aa14.13□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 LOC285556D6RIA3 1793 aa14.12□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 CEP350Q5VT06 3117 aa14.12□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 GOLGA8AA7E2F4 631 aa14.12□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 USP17L15C9J2P7 530 aa14.12□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 USP17L13C9JLJ4 530 aa14.12□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 USP17L11C9JVI0 530 aa14.12□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 USP17L18D6R9N7 530 aa14.12□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 USP17L22D6RA61 530 aa14.12□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 USP17L17D6RBQ6 530 aa14.12□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 USP17L19D6RCP7 530 aa14.12□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 USP17L20D6RJB6 530 aa14.12□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 DHX16O60231 1041 aaKnown RBP14.12□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 SNHG28P0DPA3 235 aa14.12□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 MAP2K2P36507 400 aa14.12□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 ZNF543Q08ER8 600 aa14.12□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 USP17L24Q0WX57 530 aa14.12□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 IKQ13123 557 aaPredicted RBP14.12□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 RTN1Q16799 776 aa14.12□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 FAM83BQ5T0W9 1011 aa14.12□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 CPLX2Q6PUV4 134 aaKnown RBP14.12□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 NOL8Q76FK4 1167 aaKnown RBP14.12□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 FAM160B2Q86V87 743 aa14.12□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 FANCBQ8NB91 859 aa14.12□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 CHURC1Q8WUH1 139 aa14.12□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 MS4A4AQ96JQ5 239 aa14.12□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 LZTS2Q9BRK4 669 aa14.12□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 MYL10Q9BUA6 226 aa14.12□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 SLKQ9H2G2 1235 aaPredicted RBP14.12□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 RPAP3Q9H6T3 665 aaPredicted RBP14.12□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 SH2B1Q9NRF2 756 aaPredicted RBP14.12□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 FEM1BQ9UK73 627 aa14.12□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 BRPF3Q9ULD4 1205 aa14.12□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 SLC45A1Q9Y2W3 748 aa14.12□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 WDR33Q9C0J8 1336 aaKnown RBP14.12□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 TESPA1A2RU30 521 aaPredicted RBP14.11□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 OSBPP22059 807 aa14.11□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 PDIA3P30101 505 aaKnown RBP14.11□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 HOXA7P31268 230 aaPredicted RBP14.11□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 STAT2P52630 851 aa14.11□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 IRX3P78415 501 aaPredicted RBP14.11□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 ANKRD23Q86SG2 305 aa14.11□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 HSCBQ8IWL3 235 aa14.11□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 BRI3BPQ8WY22 251 aa14.11□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 ZCCHC17Q9NP64 241 aaKnown RBP14.11□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 TPCN1Q9ULQ1 816 aa14.11□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 NID2Q14112 1375 aa14.1□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 PALM3A6NDB9 673 aaPredicted RBP14.1□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 TMEM232C9JQI7 657 aa14.1□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 CPLX1O14810 134 aa14.1□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 PLA2G6O60733 806 aa14.1□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 PFKFB2O60825 505 aa14.1□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 FLOT1O75955 427 aa14.1□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 ALDH1A1P00352 501 aa14.1□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 VEGFBP49765 207 aa14.1□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 KIF23Q02241 960 aaPredicted RBP14.1□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 KIAA1755Q5JYT7 1200 aa14.1□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 CATSPERGQ6ZRH7 1159 aa14.1□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 KCTD1Q719H9 257 aa14.1□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 GTF3C2Q8WUA4 911 aaPredicted RBP14.1□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 SNX21Q969T3 373 aa14.1□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 NUP88Q99567 741 aaPredicted RBP14.1□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 SLF1Q9BQI6 1058 aa14.1□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 LARP6Q9BRS8 491 aaKnown RBP14.1□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 GPCPD1Q9NPB8 672 aa14.1□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 HOXC10Q9NYD6 342 aa14.1□□□□□ -0.15
GTF2IRD2B-201ENST00000394939 CTDP1Q9Y5B0 961 aaPredicted RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms